MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-136H09
Chromosome	X (Build37)
Map Location	146,359,119 - 146,369,476
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG624310, Ott, LOC666888, LOC100039598, LOC100039890, LOC100039612, EG666923, EG624378, LOC100039934, LOC100039629, LOC382243, EG666961, EG666968, OTTMUSG00000018988, LOC100039651, EG624568
Downstream gene	LOC382244, LOC100039669, EG666982, EG624631, EG546387, LOC333588, Tmem29, LOC100040101, Alas2, Apex2, Pfkfb1, Tro, LOC100039716, Maged2, Itih5l, LOC667021
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG624310 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624310 MGI:3644796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Ott (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18422 MGI:107573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100039598 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039598
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039890 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 15 ESTs, 9 Proteins

name	LOC100039612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	EG666923 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666923 MGI:3645202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG624378 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624378 MGI:3644585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039934 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 16 ESTs, 6 Proteins

name	LOC100039629 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC382243 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666961 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666961 MGI:3644995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG666968 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666968 MGI:3648805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	OTTMUSG00000018988 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434869 MGI:3710639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 16 ESTs, 4 Proteins

name	LOC100039651 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG624568 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624568 MGI:3643049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC382244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 16 ESTs, 8 Proteins

name	LOC100039669 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039669
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG666982 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666982 MGI:3644367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG624631 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624631 MGI:3647290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG546387 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546387 MGI:3644989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 130 ESTs, 5 Proteins

name	LOC333588 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:333588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Tmem29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382245 MGI:1923420
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs, 1 Protein

name	LOC100040101 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Alas2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11656 MGI:87990
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apex2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77622 MGI:1924872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pfkfb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18639 MGI:107816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tro (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56191 MGI:1928994
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039716 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins pseudo : _no_value

name	Maged2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80884 MGI:1933391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih5l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634882 MGI:2685232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 21 Proteins pseudo : _no_value

name	LOC667021 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	EG624310 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272430 GeneID:624310 MGI:3644796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG624310 transcript_id : XM_888852.2

name	Ott (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859585 GeneID:18422 MGI:107573
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed transcript_id : NM_011022.1

name	LOC100039890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272457 GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 15 ESTs, 5 Proteins product : similar to ovary testis transcribed, transcript variant 1 transcript_id : XM_001473712.1

name	LOC100039890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272459 GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 4 Proteins product : similar to ovary testis transcribed, transcript variant 2 transcript_id : XM_001473728.1

name	LOC100039890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272461 GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 1 Protein product : similar to ovary testis transcribed, transcript variant 3 transcript_id : XM_001473747.1

name	LOC100039934 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272465 GeneID:100039934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 16 ESTs, 2 Proteins product : similar to Ott protein, transcript variant 1 transcript_id : XM_001473791.1

name	LOC100039934 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272467 GeneID:100039934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 1 Protein product : similar to Ott protein, transcript variant 2 transcript_id : XM_001473809.1

name	LOC100039934 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272469 GeneID:100039934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 4 Proteins product : similar to Ott protein, transcript variant 3 transcript_id : XM_001473830.1

name	LOC382243 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:130507580 GeneID:382243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed like transcript_id : NM_001037716.2

name	OTTMUSG00000018988 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408373 GeneID:434869 MGI:3710639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 16 ESTs, 2 Proteins product : predicted gene, OTTMUSG00000018988, transcript variant 1 transcript_id : XM_486794.3

name	OTTMUSG00000018988 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408374 GeneID:434869 MGI:3710639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 2 Proteins product : predicted gene, OTTMUSG00000018988, transcript variant 3 transcript_id : XM_897991.2

name	LOC382244 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408376 GeneID:382244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 16 ESTs, 4 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 3 transcript_id : XM_356360.4

name	LOC382244 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272473 GeneID:382244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 1 Protein product : novel protein similar to ovary testis transcribed (Ott), transcript variant 1 transcript_id : XM_001473979.1

name	LOC382244 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272475 GeneID:382244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 4 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 2 transcript_id : XM_001473992.1

name	EG624631 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272436 GeneID:624631 MGI:3647290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG624631 transcript_id : XM_889176.3

name	LOC333588 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272484 GeneID:333588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical LOC333588 transcript_id : XM_001474045.1

name	Tmem29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408378 GeneID:382245 MGI:1923420
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 1 Protein product : transmembrane protein 29, transcript variant 1 transcript_id : XM_356361.4

name	Tmem29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408377 GeneID:382245 MGI:1923420
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 ESTs, 1 Protein product : transmembrane protein 29, transcript variant 2 transcript_id : XM_898013.2

name	LOC100040101 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272487 GeneID:100040101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040101 transcript_id : XM_001474106.1

name	Alas2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130319 GeneID:11656 MGI:87990
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aminolevulinic acid synthase 2, erythroid transcript_id : NM_009653.2

name	Apex2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21541817 GeneID:77622 MGI:1924872
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apurinic/apyrimidinic endonuclease 2 transcript_id : NM_029943.1

name	Pfkfb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361607 GeneID:18639 MGI:107816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 1 transcript_id : NM_008824.2

name	Tro (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110618257 GeneID:56191 MGI:1928994
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trophinin transcript_id : NM_019548.3

name	Tro (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110618254 GeneID:56191 MGI:1928994
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trophinin transcript_id : NM_001002272.2

name	Maged2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507637 GeneID:80884 MGI:1933391
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma antigen, family D, 2 transcript_id : NM_030700.1

name	EG624310 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272431 GeneID:624310 MGI:3644796
definition	codon_start : 1 product : similar to AU022751 protein protein_id : XP_893945.2

name	Ott (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859586 GeneID:18422 MGI:107573
definition	codon_start : 1 product : ovary testis transcribed protein_id : NP_035152.1

name	LOC100039890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272458 GeneID:100039890
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001473762.1

name	LOC100039890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272462 GeneID:100039890
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_001473797.1

name	LOC100039890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272460 GeneID:100039890
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001473778.1

name	LOC100039934 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272466 GeneID:100039934
definition	codon_start : 1 product : similar to Ott protein isoform 1 protein_id : XP_001473841.1

name	LOC100039934 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272468 GeneID:100039934
definition	codon_start : 1 product : similar to Ott protein isoform 2 protein_id : XP_001473859.1

name	LOC100039934 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272470 GeneID:100039934
definition	codon_start : 1 product : similar to Ott protein isoform 3 protein_id : XP_001473880.1

name	LOC382243 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:130507581 GeneID:382243
definition	codon_start : 1 product : ovary testis transcribed like protein_id : NP_001032805.2

name	OTTMUSG00000018988 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51772479 GeneID:434869 MGI:3710639
definition	codon_start : 1 product : hypothetical protein LOC434869 isoform 1 protein_id : XP_486794.1

name	OTTMUSG00000018988 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408375 GeneID:434869 MGI:3710639
definition	codon_start : 1 product : hypothetical protein LOC434869 isoform 3 protein_id : XP_903084.2

name	LOC382244 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:38086787 GeneID:382244
definition	codon_start : 1 product : hypothetical protein LOC382244 isoform 3 protein_id : XP_356360.1

name	LOC382244 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272476 GeneID:382244
definition	codon_start : 1 product : hypothetical protein LOC382244 isoform 2 protein_id : XP_001474042.1

name	LOC382244 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272474 GeneID:382244
definition	codon_start : 1 product : hypothetical protein LOC382244 isoform 1 protein_id : XP_001474029.1

name	EG624631 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272437 GeneID:624631 MGI:3647290
definition	codon_start : 1 product : similar to AU022751 protein protein_id : XP_894269.3

name	LOC333588 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272485 GeneID:333588
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474095.1

name	Tmem29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83004391 GeneID:382245 MGI:1923420
definition	codon_start : 1 product : similar to chromosome X open reading frame 44, isoform 1 protein_id : XP_356361.3

name	Tmem29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83004389 GeneID:382245 MGI:1923420
definition	codon_start : 1 product : similar to chromosome X open reading frame 44, isoform 2 protein_id : XP_903106.1

name	LOC100040101 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272488 GeneID:100040101
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474156.1

name	Alas2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859502 GeneID:11656 MGI:87990
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0003870 - 5-aminolevulinate synthase activity [Evidence IMP] [Evidence ISS] [Evidence IEA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016769 - transferase activity, transferring nitrogenous groups [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0006783 - heme biosynthesis [Evidence IEA] [Evidence IMP]; GO:0006879 - iron ion homeostasis [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : erythroid-specific ALAS; 5-aminolevulinate synthase product : aminolevulinic acid synthase 2, erythroid protein_id : NP_033783.1

name	Apex2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21541818 CCDS:CCDS30463.1 GeneID:77622 MGI:1924872
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003906 - DNA-(apurinic or apyrimidinic site) lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : AP endonuclease 2 protein_id : NP_084219.1

name	Pfkfb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315988 CCDS:CCDS30464.1 GeneID:18639 MGI:107816
definition	GO_component : GO:0043540 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex [Evidence ISS] GO_function : GO:0003873 - 6-phosphofructo-2-kinase activity [Evidence ISS] [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004331 - fructose-2,6-bisphosphate 2-phosphatase activity [Evidence ISS] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006003 - fructose 2,6-bisphosphate metabolism [Evidence ISS] [Evidence IEA]; GO:0006094 - gluconeogenesis [Evidence ISS]; GO:0006096 - glycolysis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : PFK-2/FBPase-2 gene A; 6-phosphofructo-2-kinase/fructose-2,6-biphosphata se 1 product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 1 protein_id : NP_032850.1

name	Tro (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50593514 GeneID:56191 MGI:1928994
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_process : GO:0007155 - cell adhesion [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence IDA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; necdin and trophinin like; trophinin-2; magphinin-alpha; magphinin-gamma; magphinin-beta 2; melanoma antigen, family D, 3-like product : trophinin isoform 3 protein_id : NP_062421.2

name	Tro (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50593518 CCDS:CCDS30465.1 GeneID:56191 MGI:1928994
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_process : GO:0007155 - cell adhesion [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; necdin and trophinin like; trophinin-2; magphinin-alpha; magphinin-gamma; magphinin-beta 2; melanoma antigen, family D, 3-like product : trophinin isoform 1 protein_id : NP_001002272.1

name	Maged2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507638 CCDS:CCDS30466.1 GeneID:80884 MGI:1933391
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 function : unknown product : melanoma antigen family D, 2 protein_id : NP_109625.1

name	LOC666888 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666888
definition	number : 1 pseudo : _no_value

name	LOC100039598 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039598
definition	number : 2 pseudo : _no_value

name	LOC100039598 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039598
definition	number : 1 pseudo : _no_value

name	LOC100039612 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039612
definition	number : 1 pseudo : _no_value

name	LOC100039612 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039612
definition	number : 2 pseudo : _no_value

name	LOC100039612 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039612
definition	number : 3 pseudo : _no_value

name	LOC100039612 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039612
definition	number : 4 pseudo : _no_value

name	EG666923 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666923
definition	number : 1 pseudo : _no_value

name	EG624378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624378
definition	number : 2 pseudo : _no_value

name	EG624378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624378
definition	number : 1 pseudo : _no_value

name	LOC100039629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039629
definition	number : 2 pseudo : _no_value

name	LOC100039629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039629
definition	number : 1 pseudo : _no_value

name	EG666961 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666961
definition	number : 1 pseudo : _no_value

name	EG666968 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666968
definition	number : 3 pseudo : _no_value

name	EG666968 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666968
definition	number : 2 pseudo : _no_value

name	EG666968 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666968
definition	number : 1 pseudo : _no_value

name	LOC100039651 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039651
definition	number : 1 pseudo : _no_value

name	LOC100039651 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039651
definition	number : 2 pseudo : _no_value

name	LOC100039651 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039651
definition	number : 3 pseudo : _no_value

name	LOC100039651 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039651
definition	number : 4 pseudo : _no_value

name	EG624568 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624568
definition	number : 2 pseudo : _no_value

name	EG624568 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624568
definition	number : 1 pseudo : _no_value

name	LOC100039669 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039669
definition	number : 1 pseudo : _no_value

name	LOC100039669 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039669
definition	number : 2 pseudo : _no_value

name	LOC100039669 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039669
definition	number : 3 pseudo : _no_value

name	EG666982 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666982
definition	number : 1 pseudo : _no_value

name	LOC667021 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667021
definition	number : 6 pseudo : _no_value

name	LOC667021 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667021
definition	number : 5 pseudo : _no_value

name	LOC667021 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667021
definition	number : 4 pseudo : _no_value

name	LOC667021 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667021
definition	number : 3 pseudo : _no_value

name	LOC667021 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667021
definition	number : 2 pseudo : _no_value

name	LOC667021 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667021
definition	number : 1 pseudo : _no_value

name	EG546387 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272483 GeneID:546387 MGI:3644989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 130 ESTs, 5 Proteins product : predicted gene, EG546387 transcript_id : XR_001595.2

name	LOC100039716 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272438 GeneID:100039716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins product : similar to ribosomal protein L13 pseudo : _no_value transcript_id : XR_031183.1

name	Itih5l (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272489 GeneID:634882 MGI:2685232
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 21 Proteins product : inter-alpha (globulin) inhibitor H5-like pseudo : _no_value transcript_id : XR_031663.1

clone name	MSMg01-541N09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-535B02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-078P12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-083G04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-496H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-059C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-444B11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-136H09.b	B6Ng01-136H09.g
ACC	DH936228	DH936229
length	962	986
definition	DH936228\|Mus musculus domesticus DNA, BAC clone: B6Ng01-136H09, 5' end.	DH936229\|Mus musculus domesticus DNA, BAC clone: B6Ng01-136H09, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagcatatcgacacactattggcttattcaaacatcagcagaaga attacatgtaagtgcagggtgtcagagttctgtgagtagttgactcagtt tagatagacctgttatgtcctcacattcctctttatctttaaggttaagc tgttcccaggattgttttaactatggggcatacctgggtttggttttctt tttcctcagccccaggcagcctctaggttggcaaataatgaggaatttct gagttcgttgtatgacttacaggtcttgaaatttcatctttctttcagtc atgttttttttctcacctctgacaccatttaagtttaacaattctttcgg atttggtcttaagtaccctttccaattataaaaccataatctgcattcta tgctcctttagggactcctgagttgtatcctatttttttctcacctctga caccatatagttaagaacatttcctcaaacaacagggattgattcccagc acattgctcacagccatcgattccaggagaatcgagccctcttctggact gataaggcatctggcacacacttgagtcacaggcaactcagaggaaaata accaaaaagatgtactgaaaaatctaaatgaaaagaaatgagtgggcggc gccatcttcagctccagacagccggccaccttcctggtgagagcacgggg gtctgcccggcctgagaggtttgtggcacaggcgccggcgggagccttct tggctccgggactccgcggagggcaggctgcacgggtgaccgtgtggaat acagagtgccagccgtttctgggacaggcgagagtcgcagagcttctggg cggtgccatcttcagctccagatagcggccacctttctggtgagagcacg ggggtctgccaggcctgagaggttgtggcacaggcgccggcgggagccgt cttggctccggg	gaattcttcctttccaatttgtatccccttagcctccttttgttgtcaaa ttgctctggctaggacttcaagtactatattgaatacatagggagaaagt ggagagccgtgtttagtacctgattttagtgggatttcttcgagttctct ccatttactagaattttattgagtatttttgcatcaatattcataaggga aattggtttgaagttctctttcttggttggatctttatgtagtttatgta tcagagtgattgtggcttcatagaatgaattgggtagagtaccttctgtt tctattttgtgaaatagtttgagaataattggaattaggtcttctttgaa ggtctgatagaactctgcactaaacccatttggtcctgggacttttttgg ttgggagactattaataactgcttctatttctttaggggatatgggactg tttaagttattaatcttatccttatttaactttggtacctggtatctgtc tagaaaaatgtgcatttcatccaggttttcctggtttgttgagtatcacc ttttgcagtaggatctgataattattatttcctcagattctgttgttatg tcttccttttcatttctgattttgttaattaggatactgtccctgtgccc tctagttattctggctaagggtttattttatctgtgctggtttgtatata cttggcccaggggagtggcaccatctgaaggtctggccttcttggaatag gtgtgacctggttggaatgggtgtgtcactgtgggtgtgggtataagatc ctcaccctagttgcctgggaagtcagtcttccactagccacctttggatg aaaacatagaactcttcagctcctcctgcgcaatgccttcctggatattg ccatgctcccaccttgatgataatgaatgaacttctgaactgtaagcagc ccctatttaaatgttgttttttataaaacttgcctt
quality values	Open. Hide. 10 8 7 14 25 27 19 12 16 11 31 55 47 61 41 55 55 37 55 49 61 61 61 61 61 41 32 36 27 18 27 43 49 30 36 59 59 59 59 59 59 59 59 61 59 59 61 61 59 61 59 59 61 59 59 61 61 59 61 61 61 59 61 61 61 59 59 61 61 59 61 59 59 59 59 61 59 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 59 61 61 61 59 61 59 61 59 61 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 52 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 37 61 55 50 49 55 55 47 50 55 50 55 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 55 50 53 52 61 61 61 61 61 61 61 61 61 61 61 61 47 53 61 61 53 61 61 61 43 61 53 61 53 45 50 61 47 50 61 52 43 53 38 50 43 50 50 50 50 61 61 61 61 61 61 61 61 47 61 61 61 52 61 61 52 61 61 61 53 61 61 61 61 61 53 53 61 61 61 61 61 42 61 61 38 61 61 53 61 61 47 61 53 53 61 53 53 52 47 27 57 24 53 57 57 57 50 53 47 47 53 53 50 53 47 47 34 38 39 43 50 50 45 47 50 52 50 50 47 53 53 50 38 53 45 53 43 52 57 57 53 53 53 40 57 57 36 42 57 50 40 52 53 57 53 50 57 57 38 43 46 47 32 53 50 52 53 45 38 29 50 53 52 38 34 41 43 42 37 38 30 39 24 47 27 53 37 35 41 50 53 38 50 36 52 57 52 45 53 45 53 32 41 29 29 37 52 53 57 38 38 43 52 45 28 52 50 31 26 8 50 50 50 50 25 38 11 29 11 57 53 40 30 52 52 30 38 31 40 26 38 30 23 25 37 24 40 20 26 57 44 52 24 50 37 30 32 30 30 34 34 47 24 50 27 37 13 39 33 52 23 42 26 41 20 33 31 28 40 9 53 46 26 40 28 25 19 40 33 36 29 29 24 37 14 9 31 42 24 23 22 29 39 28 37 40 37 40 29 31 37 31 31 40 20 29 35 30 29 17 23 31 27 17 25 53 41 37 40 35 57 20 35 24 25 29 28 26 33 48 16 44 20 20 29 18 28 37 10 30 20 21 10 20 28 27 38 44 32 22 21 29 10 19 23 32 14 30 28 19 12 11 12 18 29 29 25 29 23 25 18 14 27 9 11 8 47 19 17 13 12 20 27 27 12 16 16 29 29 12 26 33 21 31 12 23 21 18 30 39 39 39 36 28 21 27 29 29 29 20 35 30 33 23 35 34 29 6 31 11 8 28 36 19 28 28 29 14 22 23 20 15 28 17 18 26 27 20 21 10 17 41 8 17 15 26 24 25 21 14 19 25 27 32 19 28 8 23 13 36 20	Open. Hide. 61 61 52 49 55 39 37 43 49 43 43 61 61 59 37 29 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 59 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 61 55 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 55 55 61 61 61 55 47 61 61 47 43 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 61 53 53 53 61 61 53 61 61 61 61 61 53 50 61 31 61 47 61 52 50 61 61 31 52 47 43 43 53 61 61 45 47 61 61 61 61 53 61 34 39 61 43 61 61 53 61 24 61 61 39 43 61 61 53 45 61 61 53 61 61 53 61 61 61 40 50 61 61 61 61 61 47 42 17 57 42 42 27 8 23 39 53 36 53 53 36 43 41 33 38 47 53 47 43 53 47 47 50 53 50 50 29 42 47 53 45 40 53 21 57 53 43 36 47 53 53 57 47 42 31 35 37 12 47 42 45 57 26 42 32 57 57 21 40 53 47 53 40 50 43 45 47 50 37 29 52 37 25 23 40 50 28 30 30 30 17 24 30 43 34 38 38 38 29 53 57 23 50 30 38 38 45 24 27 50 45 21 50 38 39 41 53 30 35 52 29 47 45 28 17 5 45 24 22 27 27 42 41 24 41 52 42 53 40 38 16 38 38 37 38 30 47 33 34 7 53 36 32 33 50 36 34 32 57 57 24 38 32 38 21 21 10 13 28 53 23 53 57 38 27 39 21 33 57 44 29 23 34 40 40 31 47 13 39 53 31 31 10 13 30 30 18 20 23 31 26 29 23 19 14 40 32 9 37 29 10 23 24 10 9 5 23 17 33 25 29 12 10 12 16 6 8 10 10 10 11 12 40 33 29 10 19 12 23 30 29 23 30 32 17 17 22 10 26 37 10 20 11 12 7 22 16 13 19 41 48 33 19 12 18 11 13 10 7 14 5 12 25 11 18 26 26 33 30 24 29 29 20 23 8 25 11 19 15 21 27 6 11 25 27 13 14 13 13 9 11 13 14 16 46 14 11 14 29 28 25 30 19 18 10 8 7 7 17 21 15 22 29 18 28 14 23 8 30 20 36 22 19 16 8 10 10 10 16 28 30 17 6 13 6 41 11 12 12 9 15 21 26 12 14 27 9 27 10 31 17 19 13 10 22 14 16 6 8 10 10 8 10 10 7

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_146359119_146369476
seq2: B6Ng01-136H09.b_42_949

seq1  GAATTCAGCATAGCGGCACACTATTGGCTTATTCAAACATCAGTAGAAAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATTACATGTACGTGCAGAGTGTCAGAGATCTGTGACTTATTGACTCAGTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  TAGATAGACCTGTTATGTCCTCACATTCCTCTTTATATTTAAGGTTAAGC  150
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTCCCAGGAGTGGTTTAACTAAGGGGCATATCCGGGTTGGTTTTACTT  200
                                                        
seq2  --------------------------------------------------  0

seq1  TTATTCTCACCACCAGGCAGCCTCTAGGCTCACAAACTACTAGCAATTTC  250
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGTTCTTTGCATGACTTACAGGTCTTAAAATTTCATCTTTCTTTCAAT  300
                                                        
seq2  --------------------------------------------------  0

seq1  CCTATTTTTTTCTCACCTCTGACACCATATAGTTAAGAACATTACTTCAA  350
                                                        
seq2  --------------------------------------------------  0

seq1  ACAACATGGATTGATTCCCAGCACATTGCTCACAACCATGAATTCCAGGA  400
                                                        
seq2  --------------------------------------------------  0

seq1  GAACTGAGCCCTCTTCTGGATTGCACAGGCATCAGGCACACAGTTGAGTC  450
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGGCAACACGGAGGCAAAATAACCAAAAAGATGAACTGAGAAATCAAA  500
                                                        
seq2  --------------------------------------------------  0

seq1  ATGAAAAGAAATAAAACAAATTGAGATCAGTGTGAACAGAACTATTTAGA  550
                                                        
seq2  --------------------------------------------------  0

seq1  GCCCGTTACTAATGATCAGGATTTCCCTAGTATACAACAGAGAATACATT  600
                                                        
seq2  --------------------------------------------------  0

seq1  TAAGGAGCTGGTTGAAAAGCATGTGGCATGATGAAGTTCTTCCAGGTTTT  650
                                                        
seq2  --------------------------------------------------  0

seq1  CCATCCCAGCGGTTGAATTTTGTGAAAATGCCCCTTGGGAGCAGAGTAGC  700
                                                        
seq2  --------------------------------------------------  0

seq1  AGGCATGTGAATATAGCTGCTTTCCCCGCCCCTCACTTGGAATTGGAGGC  750
                                                        
seq2  --------------------------------------------------  0

seq1  ATGGTGTGGCCTGGCATAGGCAGAAGTCTGGCCAATGAGCCTCTGCAACA  800
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCAGAAAGCACAGTGATTGGAGGACGCCTTTAGGGAAGTGTTGAGAGC  850
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTGACTGGTCCGGGGAAGACACACCTCAGCAAGTGGATCTCTGGGCTT  900
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGGTGGCTGGGACTCCCACAGGATGTGTCAACCTGATGCCGAACCATG  950
                                                        
seq2  --------------------------------------------------  0

seq1  ACGGTAACCAGTTCTCTCTAGTTTGAGAGTAGCAGCGCGACCCCTCTCCC  1000
                                                        
seq2  --------------------------------------------------  0

seq1  TGCTCAGGGTTCCCACTGGTCAGAAAAGGATGTTGACTGGGAGACCTCTG  1050
                                                        
seq2  --------------------------------------------------  0

seq1  CATAACCCAGGCAGCTCAAAATGACATCTGGAGTTTTGGAGGTTTCCAGA  1100
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGGTTCGGGCACTGTCTCTCCTGTCTTCCTCATTCGAGGAGGGGCTTT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  TAGCTGTTCTGGCACAGTGCCCCTCTACCCCATCAAAGCATCTATTCTAG  1200
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGGAAACTTTAATATCCTAGCTATTGATGGTTATTGGATGGGGCAACA  1250
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAAACGGCCCTTATTTTTGAGTAAGCACAAGGGGCTTGGTGAGTTCAC  1300
                                                        
seq2  --------------------------------------------------  0

seq1  ACCTCCAGGATCACATAACTAAAGCCTAGTGTTAGTCTTCTAGGAATCTG  1350
                                                        
seq2  --------------------------------------------------  0

seq1  GGAATTAGAATGCCAGAAGGGTATAGCACAGAATTTTTTAGGGGGCGTGG  1400
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTGAGCATGTGTGATGGGCTTCATTCGTGGATGTAAGGCTAGCTTTCC  1450
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGATCCTCAAATTAAGTGGAGCATGAACATTTGTTGGATGGGTTTCCT  1500
                                                        
seq2  --------------------------------------------------  0

seq1  TGATTGTTTATATAAATCACTATTGTTCCATGTCTGGATATAGATTTCAA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  TAATTACACATGCCATAGCTTAATCCTGCTGCCCCTTCCTGCCCAGTCCT  1600
                                                        
seq2  --------------------------------------------------  0

seq1  TTCATACTTTCACTCCCTGAACATTCCCTGGCTATCCACTAAGCAGCACT  1650
                                                        
seq2  --------------------------------------------------  0

seq1  TTGTTAGCATTAACAAGGGCTCCAAAGTATCAGTGAAAGTGTGTGTGTGT  1700
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCGTGTGTGTGTGTGTGTTTGTGTGTTTGTGTCTGAGGGTCTGTGCAT  1750
                                                        
seq2  --------------------------------------------------  0

seq1  TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCGCGCGCGCGACTT  1800
                                                        
seq2  --------------------------------------------------  0

seq1  TGTATTTGGGTGTGTTTTTCTCTGTGTGAGTCTTTCTGTTTGAGTATGAA  1850
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGAATATGGCATAAAATATTTAACAAGTTACATAGGCTGCAGGTACAG  1900
                                                        
seq2  --------------------------------------------------  0

seq1  GAGTGTCTGCACACTAGTAAGAAGAGAGTAAGTGACTGGAAGCACAGAAT  1950
                                                        
seq2  --------------------------------------------------  0

seq1  TAAGAATACAGTTAGACCCAGAGCTGGAAACAGAAAGACACAGAAGGAGG  2000
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAGAAATGGGGAGGAGATGCAAGGCATGGTAGCCCATGACTTGAGTCT  2050
                                                        
seq2  --------------------------------------------------  0

seq1  TAGCAGTGGTGAGGCAGAGGCAAGGGCATATTTTTGGATGTGAGCCCAGA  2100
                                                        
seq2  --------------------------------------------------  0

seq1  CTGATCTGTCAAAGAGACAGACCCTTTCTCCTAAAAGAAAAACATATATT  2150
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAGAAATGGTATAGAGGATTCATATTAGGGAAAACAGAACCAGGAC  2200
                                                        
seq2  --------------------------------------------------  0

seq1  AGGCATGAGAAATAAAGTTTGTCGAGGGTCTGCCAAACAGCAGGTAATCT  2250
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCTCCAAAGCCACGTGCGTAAAGTAAAATTTTAATTTTTCTTACTTAC  2300
                                                        
seq2  --------------------------------------------------  0

seq1  CATGGTATCGTATTTTAACAAGGTCTCACTGCAGGATATCTTCCATTGGG  2350
                                                        
seq2  --------------------------------------------------  0

seq1  TCATGAAGCATGGGATAACCTGAATTCAAGGCTGGTACAGTCTGTCTGCA  2400
                                                        
seq2  --------------------------------------------------  0

seq1  TCAGATGCTGCCCTGGGTTTCAAATTCAGTGCTTTGGTGTAATCTAGTCA  2450
                                                        
seq2  --------------------------------------------------  0

seq1  AGCACTCTATGAAAAGTAACCCTCCGGACTTCTGAACAAGTTAAGACCTT  2500
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTAGTTTTTATATATGTCGGCAGATTCTGGATACACAGCACAGGCTGG  2550
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTCTTTGTCTTACATTGATGTGTTCTGCTGCTAGTGCAAGATTTTAGT  2600
                                                        
seq2  --------------------------------------------------  0

seq1  GTCAGTCACCACACCAGGTTTGTTGTTCAATTTGCTTTTGGTTTGTCCTT  2650
                                                        
seq2  --------------------------------------------------  0

seq1  CTATAAAGTGGATTGTATTCTATTCCAGAGCTAAAGAGAAAATCAGTTAT  2700
                                                        
seq2  --------------------------------------------------  0

seq1  CAGTTGCTAAGTTCCTTTGACTGGCCTCATGGAGAAACAGGAGCAAACAG  2750
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGAGGTCTAAAATGATCCCAGATCAAGAGGTTAAGGAATAATTACATG  2800
                                                        
seq2  --------------------------------------------------  0

seq1  TTCACCGTGCAAATAACATAATTTTTCTTTTCTTCTCTGCCAGAATCACT  2850
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTGTGTGTCTGATGGTAAAGGTGTGGCTACATCTCTGTGTGCTTCTG  2900
                                                        
seq2  --------------------------------------------------  0

seq1  TTAGTATGTGAACAGTTGCACATGTTTTGTAGTAGTGCTGTTAGGATTGT  2950
                                                        
seq2  --------------------------------------------------  0

seq1  CTACTTCCATGTGGAGGCTGACTGGTACCTCTGGCAGTTCTTCATCAGGA  3000
                                                        
seq2  --------------------------------------------------  0

seq1  ATCATCCTCATGTATGCTGAGATCAGTCTCTCATAGGGACTTGGGGCTTA  3050
                                                        
seq2  --------------------------------------------------  0

seq1  GCAGTCAGGCCAAGGTAGTTGTCCACTACAACATCCTTGGGATTCTCTGA  3100
                                                        
seq2  --------------------------------------------------  0

seq1  GCTCTGCCTTCACACACGAGGGATTACTGTTATAAATTATGGTGGTCTAC  3150
                                                        
seq2  --------------------------------------------------  0

seq1  ATATTTTTCCATATATTGATTCTTTTGGTATTGAGTCAGTTGTGATAAGG  3200
                                                        
seq2  --------------------------------------------------  0

seq1  CATGCTATGGTGCAGATAAGTGTGGATTAGAGCATAAGGTACAGGAGTTG  3250
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCATTATTTTCACCATGCCATTCCCAGGGATCCAACTTAGGTTGTTCA  3300
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAGACAGCAACAACAGTGACTCACTGAACCTTTTCACTGGCCCTTGAG  3350
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTGGTTTCTGCAGGGAATCTGGGCATCTAATTCAGATCCTAAGTCAT  3400
                                                        
seq2  --------------------------------------------------  0

seq1  CTAAGGAAAGAGTTTAACAGCTTTTATATGTCTCCAGTTCTTTTGACAGA  3450
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAAAAAAGCCAGGAAAATTATTCCCATTTTTATTTCTAATCCAGCCA  3500
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAGACATCAAGCTGGATACACAGAAAATCAAGGGACCAGTTGTTGGGG  3550
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAAAGCATTCTTAAGCCAGGTTACACATTTCACGTTATTTATGCATCT  3600
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTTCGGTACATATAGAGTTTTGGAGTAAAGAAAACTTACAATATTGCC  3650
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTCTGACCTTTCAGTTGAAATTGTGCTGCATTTGTTCATGTGTTTGT  3700
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTTCATTGCTTCGTTTATTTACCTCTTAATTTTTTATATGAAGCTGCA  3750
                                                        
seq2  --------------------------------------------------  0

seq1  GAGTGAAGGGGCAACCTGTCTTGAAACAATACTTTGGTCAAAAGCCTGTC  3800
                                                        
seq2  --------------------------------------------------  0

seq1  CTAAAATCCAGTATTCACTGAGCCTGAATTCCAATGCAATCCTTCTGCTT  3850
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCAGTTTTAGACATGAAATTGTAGATATAATCTGCCAGGTAATGCTCA  3900
                                                        
seq2  --------------------------------------------------  0

seq1  TTCAGGGATGTGATAATTTCATTTGTTTGGATTGGTTTTTAGGAAAGTGT  3950
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCTTTAATGCCTGCTGGCTGGAGACACCCATTGTGGCTGAGGATGACA  4000
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAATGCCCCATTATTCTGCTTTTTACAGTGCTGGGATTTTGCATATAC  4050
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGTCCTACCTGGAGCATTCTTCAAAACAGACAAACTGTTTTTTAAAAA  4100
                                                        
seq2  --------------------------------------------------  0

seq1  CTTCAATACCAGGCTCATGTAATCCACTGGAACATTAAATGACTGCTGGC  4150
                                                        
seq2  --------------------------------------------------  0

seq1  TAGGCTGAGTTCTGGGACATATTGTATGCTTGTAAGCATGAGAATCTGAG  4200
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGATGCCCAGGAAAATGGACTGGAAACCTAAAAATATCCTCAAATATG  4250
                                                        
seq2  --------------------------------------------------  0

seq1  TGTAGGTAATCAAATGTAATAAGGCTAGGTCAAGAAGATAAGAGTTATTT  4300
                                                        
seq2  --------------------------------------------------  0

seq1  ACATGGACTCTTCAGCTACAGCACAATTTCAGGACCAGACAGGAATATAT  4350
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAAATGTAGATAAAACATGTACTTCAAATGTATAATTTCCTTCCAATT  4400
                                                        
seq2  --------------------------------------------------  0

seq1  TGAATGGGAAGTACATTTAAGTTTAAAAATCCTCCAAGATTTGGTCTTAA  4450
                                                        
seq2  --------------------------------------------------  0

seq1  TTACCCTTTCCAATTATAAAACCATAGTCTTCATTCTATACTCCTTTAGG  4500
                                                        
seq2  --------------------------------------------------  0

seq1  AACCCCTGAGTCATATCCTGATAGAACCTATTGGGGATACCCCCACTCAA  4550
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCCTAATCGGGGTGCACCCCAAAAAAAAATCACGAAGGACCATCTTGC  4600
                                                        
seq2  --------------------------------------------------  0

seq1  TGTAATTAGACTAGGTAGTTTAATTACAGAGCTCTGGACCCACATGCATC  4650
                                                        
seq2  --------------------------------------------------  0

seq1  CCACACAGGAGATAAAGGATGTCGACCAGGATGCTCAAAAGCTAGGGTTT  4700
                                                        
seq2  --------------------------------------------------  0

seq1  GTCATGGGGTAAGGGCCTTAGGGGTCTGGAATTCAGCATAGCAACACAGT  4750
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGGCTTATTCAAACATCAGCAGAAGAATTACATGTACGTGCAGGGTGT  4800
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAGTTCTGTGAGTAGTTGACTCAGTTTAGATAGCCCTGTTATGTCCTC  4850
                                                        
seq2  --------------------------------------------------  0

seq1  ACATTCCTCTTTATCTTTAAGGTTATGCTGTTCCCAGGATTGTTTTAACT  4900
                                                        
seq2  --------------------------------------------------  0

seq1  ATGGGGCAAACCTGGGTTTGGTTTTCTTTTTCCTCAGCCCCAGGCAGCCT  4950
                                                        
seq2  --------------------------------------------------  0

seq1  CTAGGCTCACAAACTACTAGCAATTTCTGAGTGCTTTGTATTATGTTACT  5000
                                                        
seq2  --------------------------------------------------  0

seq1  TACAGGTCTTGGAATTTCATCTTTCTTTCAATCCTATTTTTTTCTCACCT  5050
                                                        
seq2  --------------------------------------------------  0

seq1  CTGACACCATAAAGTTAAGAACATTGGGAGGGCTGTTTCCTCAAACAACA  5100
                                                        
seq2  --------------------------------------------------  0

seq1  TGCATTGATTCCCAGCACATGTCTCACAACAATCGATTGCAGGAAAATTG  5150
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCCTCTTCTGGACTGCACATCCATCAGGCACACACTTGAGTCACAGGT  5200
                                                        
seq2  --------------------------------------------------  0

seq1  AACACGGAGGCAAAATAACCAAAAAGATGAACTGAGAAATCAAAATGAAA  5250
                                                        
seq2  --------------------------------------------------  0

seq1  TGAAATAAAACAAATTGAGATTAGTGTGAACAGAATTATTTAGAGCCCGT  5300
                                                        
seq2  --------------------------------------------------  0

seq1  TAGTAATGATCAGGATTTCCCTAGTATACAACAGAGAATACATTTAAGGA  5350
                                                        
seq2  --------------------------------------------------  0

seq1  GCCAGTAGAAAAGCTTGTGGCATGATGAAGTTCTTCCAGGTTTTCCATCC  5400
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAGGTTGAACTTTGTGAAAATGCCTCTCGGGAGCAGAGTAGCAGGTAT  5450
                                                        
seq2  --------------------------------------------------  0

seq1  GTGAAGATAGCTGCTTTCCCCGCCCCTCACTTGGGATTGGAGGAGTGGTG  5500
                                                        
seq2  --------------------------------------------------  0

seq1  TGGCCTGGCATAGGCTGAAATCTGGCCAATGAGCCTCTGCAACAGTGCAG  5550
                                                        
seq2  --------------------------------------------------  0

seq1  GAAGGACAGTGATTGGAGGATGCCTTTAGGGAAGTGTTGAGAGCCTCGGG  5600
                                                        
seq2  --------------------------------------------------  0

seq1  CTGGTCCAGGAAAGACACACATCAGCATGTGGATCTCTGTGCTTTGAGGT  5650
                                                        
seq2  --------------------------------------------------  0

seq1  GGCTGGGACACCCACAGGAGGTGGCAACCTGAGGGTGAACCATGAAGGTA  5700
                                                        
seq2  --------------------------------------------------  0

seq1  ACCAGTTCAATCTAGTTTGAAAGTAGCAGTGGGACCCCTCTTCCTGCTCA  5750
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTTCCCACTGGTCAGAAAAGGATGAGGACTGGGAGACCTCTGCATAAC  5800
                                                        
seq2  --------------------------------------------------  0

seq1  CCAGGCGGCTCAAATCGTGCCTGGAGGTGTGGAGATTTCCAGAGAGGGCT  5850
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGCTCTGTCTCTCCTGTCTTCCTCATTGGACGAGGGGCTTTTAGCTGT  5900
                                                        
seq2  --------------------------------------------------  0

seq1  TCTGGCACAGTGCTTCTCTACCCCATCAACCTCTCTATTCTAGAAGGGAA  5950
                                                        
seq2  --------------------------------------------------  0

seq1  ACTTTAAACATCCTGGCTATTGATGGTTATTGGATGGGGCAACAGTAAAA  6000
                                                        
seq2  --------------------------------------------------  0

seq1  CGGCACTTATTTTTGAGTGAGGACAGGGGGCTTGCAGAGTTCCCACCTCC  6050
                                                        
seq2  --------------------------------------------------  0

seq1  AGGATCACATACCTAGAGCCTAGGGATCGCCTTCTAGGAATCTGGGAATT  6100
                                                        
seq2  --------------------------------------------------  0

seq1  AGAATGCCAGAAGGGTATAACAGAGGATTTTTTTAAGGAGGGTTTGCCTG  6150
                                                        
seq2  --------------------------------------------------  0

seq1  GGATGGTGTGGGATGGGCATCATTCATGGATTTAAGGCTAGCTTTCCAGG  6200
                                                        
seq2  --------------------------------------------------  0

seq1  GATCCTCAAATTAAAACGCCAGAAAAAGTAGAGCATAAACATTTGTTGGA  6250
                                                        
seq2  --------------------------------------------------  0

seq1  TGGGTTTCCTTGATTGTTTGTATAAATCACTATTGTCCCATGCCTGCTTA  6300
                                                        
seq2  --------------------------------------------------  0

seq1  ATCCTGCTGCCGCTTCCTGCCCAGGCCTTTCCTTCTTTCACTCCCTGAAC  6350
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCCCTGGCTATCCACTAAGCAGTAATTTGTTGGCATTAACAAGGGCTT  6400
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAGCAACAGGGAAAGTTTGTTTGTGTGTGTGTATGTGTGTGTGTGTGT  6450
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTGTGCCTGTGTCTGTGTGCTTGTGTGTCTGAGGGTCTGTGTATTCTG  6500
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTGTATGTGTCTGTGAGTGTGCGCGACTGTCTCTGGGCGTGTTTGTG  6550
                                                        
seq2  --------------------------------------------------  0

seq1  TCTGTGTGAGACTGTCTTTGAGAGTATGAATGTGAATATGGCATAAAATA  6600
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAACAAGTTACATAGGGTGCAGGTTACAGGAGTGTCTGCACATTGGTG  6650
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATGGAGTAACTGACTTGGAAGCACAGAATTAAAAAAACAGTTAGACC  6700
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAGCTGGAAACAGGATTACACAGAAGGAGTGAAAGAAATGAGAGGTTG  6750
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGGCATGGTAGCACATGACTTGAGTCTTAGCAGTGGTGAGGCAGAGGC  6800
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGGCATATTTGTGGATGTGAGCTCTGACTGAGCTTTCATACAGAAAGA  6850
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTTTCTCCAAAACAAAACCAAAGATTAAAAAAGAAATGATATATAGGA  6900
                                                        
seq2  --------------------------------------------------  0

seq1  TTCAGATTAGAGAAAGCAGAACCAGGGCAGGCATGGGAAAGAAGGTCTGA  6950
                                                        
seq2  --------------------------------------------------  0

seq1  AAAACTAGGGTCTTAAAAACAGCAGGTAGTCTTGTCTCCAAAGCCATGTG  7000
                                                        
seq2  --------------------------------------------------  0

seq1  CCTAAAGTAAAATTCAAATTTTTTTTTACATAACATGGTATCGTTTCTTT  7050
                                                        
seq2  --------------------------------------------------  0

seq1  TAACAAGGTTATCATCCACTGGTTCATGAAGCATGGGATAATCTGAATTC  7100
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGCAGGTACAGTCTGTCTGAATCAGATGCTGCCCTGGGTATCAAATTC  7150
                                                        
seq2  --------------------------------------------------  0

seq1  AGTGCTTTGGTGCAATCTAGTCAAGCACTCTATGAAAAAGTAACTTTCCC  7200
                                                        
seq2  --------------------------------------------------  0

seq1  GTCTTCTGAACAAGTTAAGATCTAGAGTGGTTTTTATATATGTCGGCAGA  7250
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTGGATACACAGCACAGGCTGGCCTTCTTTGTCTTACATTGCTGTGGT  7300
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCAGCTAGTGCAAGATTTTAGTGTCAGCCACCACACCTGGTTTGTTGT  7350
                                                        
seq2  --------------------------------------------------  0

seq1  TCACTCTGCTTTTGGTTTGTCCTTCCAAAAAACCGATTGTATTCATTTCC  7400
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGCTACAGATAAAATCAGTTACGAAGTACCTTTGACTGGCTTCATGGA  7450
                                                        
seq2  --------------------------------------------------  0

seq1  GAAACAGGAGCAAACGGTTTGAGGTCTAAAATGATCCCAGAGCAAGAGGT  7500
                                                        
seq2  --------------------------------------------------  0

seq1  TAAGGAATAATTACATGCTCACTGCACACCTAACATAATATTTCCTTTCT  7550
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCTGCCAGAATCTCTTGTGTGTGTGTGTGTATGATGGTGAAGGTGTGG  7600
                                                        
seq2  --------------------------------------------------  0

seq1  CTACATCTCTGTGTGCTTCTGTTAGTATGTGAACAGGTGCCCATGTGTGT  7650
                                                        
seq2  --------------------------------------------------  0

seq1  GTAGGATTGCTGTTAGGTTTGTCCTCTTCCATGTGGATGCTCTCTGTTAC  7700
                                                        
seq2  --------------------------------------------------  0

seq1  CACTGACACTTGTTCATCAGGAATCTTCCTCATGTCTGCTGAGATCAGTC  7750
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAATAGGGACCTGGGGCTTAGCAGTCAGGCCAGGGTAGTTGTCCACTA  7800
                                                        
seq2  --------------------------------------------------  0

seq1  CAATATCCCAGGGATTCTCTGAGCTCTGCCTTCCCACATGAGGGAATACT  7850
                                                        
seq2  --------------------------------------------------  0

seq1  GTTATAAATCATGATGCTCCACATATTATTTCCATATATTGTTTCTTTTG  7900
                                                        
seq2  --------------------------------------------------  0

seq1  TGATTGATTCAGATGTCATGTGGCATGCTATGGTGCATATATGTGTGGAT  7950
                                                        
seq2  --------------------------------------------------  0

seq1  TAGTGCATAAGGTGAAGGAGTTGCTTCATTATTTTCAAAATGCCATTCCC  8000
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGATCCAACATAGGTTGCCCAGTAAGGGAGCAACTACAGTGACTCACT  8050
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCCATTTCACTGGTCCTTGAGTGTGTGGTTTCTGCAGGGAATCTGGGC  8100
                                                        
seq2  --------------------------------------------------  0

seq1  ATCTAATTCAGGTCCTAAGGCATCTAAGGAAAGAGTTTAACAGCTGTTAT  8150
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTCTCCAGTTCTTTTGACAGAGAAAACAAAGCCAGGAAAATTATTCCC  8200
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTGATTTCTAATCCAGCCAACAAGACATCAAGCTGGGTACACAGAAA  8250
                                                        
seq2  --------------------------------------------------  0

seq1  ATCAAGGGACCAGTTGTTGGGGGGAAAAGCATTCTTACTTTCAGGTTACA  8300
                                                        
seq2  --------------------------------------------------  0

seq1  CATTTCACGTAATTTATGCATCTTTCTTCGGTACATATAGAGTTTTGGAG  8350
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAGAAAACTTACAATATTGCCATTTTCTGACCTTTCAGTTGAAATTGT  8400
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGCATTTGTTTATGTGTTTGTGTGTTCATTGCTTCGTTTATTTACCTC  8450
                                                        
seq2  --------------------------------------------------  0

seq1  TTAATTTTTTATATGAAGCTGCAGAGTGAAGGGGCAACCTGTCTTGAAAC  8500
                                                        
seq2  --------------------------------------------------  0

seq1  AATACTTTGGTCAAAAGCCTGTCCTAAAATCCAGTATTCACTGAGCCTGA  8550
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCCAATGCAATCCTTCTGCTTCTGCAGTTTTAGACATGAAATTGTAGA  8600
                                                        
seq2  --------------------------------------------------  0

seq1  TATAATCTGCCAGGTAATGCTCATTCAGGGATGTGATAATTTCATTTGTT  8650
                                                        
seq2  --------------------------------------------------  0

seq1  TGGATTGGTTTTTAGGAAAGTGTTTCCTTTAATGCCTGCTGGCTGGAGAC  8700
                                                        
seq2  --------------------------------------------------  0

seq1  ACCCATTGTGGCTGAGGATGACAGGAAATGCCCCATTATTCTGCTTTTTA  8750
                                                        
seq2  --------------------------------------------------  0

seq1  CAGTGCTGGGATTTTGCATATACACAGTCCTACCTGGAGCATTCTTCAAA  8800
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGACAAACTGTTTTTTAAAAACTTCAATACCAGGCTCATGTAATCCAC  8850
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAACATTAAATGACTGCTGGCTAGGCTGAGTTCTGGGACATATTGTAT  8900
                                                        
seq2  --------------------------------------------------  0

seq1  GCTTGTAAGCATGAGAATCTGAGTTTGATGCCCAGGAAAATGGACTGGAA  8950
                                                        
seq2  --------------------------------------------------  0

seq1  ACCTAAAAATATCCTCAAATATGTGTAGGTAATCAAATGTAATAAGGCTA  9000
                                                        
seq2  --------------------------------------------------  0

seq1  GGTCAAGAAGATAAGAGTTATTTACATGGACTCTTCAGCTACAGCACAAT  9050
                                                        
seq2  --------------------------------------------------  0

seq1  TTCAGGACCAGACAGGAATATATCAGAAATGTAGATAAAACATGTACTTC  9100
                                                        
seq2  --------------------------------------------------  0

seq1  AAATGTATAATTTCCTTCCAATTTGAATGGGAAGTACATTTCAGTTTAAA  9150
                                                        
seq2  --------------------------------------------------  0

seq1  AATCCTCCAAGATTTGGTCTTAATTACCCTTTCCAATTATAAAACCATAG  9200
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTCATTCTATACTCCTTTAGGAACCCCTGAGTCATATCCTGATAGAAC  9250
                                                        
seq2  --------------------------------------------------  0

seq1  CTAGTGGGGATACCCCCACTCAATTCCCGATTCGGTGTGCACCCCAAAAA  9300
                                                        
seq2  --------------------------------------------------  0

seq1  AATCACGAAGGACCATCTTGCTGTAATTAGACTAGGTAGTTTAATTACAG  9350
                                                        
seq2  --------------------------------------------------  0

seq1  AGCTCTGGACCCACATGCATCCCACACAGGAGATAAAGGATGTCGACCAG  9400
                                                        
seq2  --------------------------------------------------  0

seq1  GATACTCAAAAGCTAGGGTTTTTCATGGGGTAAGGGGCTTAGGGGTCTGG  9450
                                                       |
seq2  -------------------------------------------------G  1

seq1  AATTCAGCATATCGACACACTATTGGCTTATTCAAACATCAGCAGAAGAA  9500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCATATCGACACACTATTGGCTTATTCAAACATCAGCAGAAGAA  51

seq1  TTACATGTAAGTGCAGGGTGTCAGAGTTCTGTGAGTAGTTGACTCAGTTT  9550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTAAGTGCAGGGTGTCAGAGTTCTGTGAGTAGTTGACTCAGTTT  101

seq1  AGATAGACCTGTTATGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGCT  9600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGACCTGTTATGTCCTCACATTCCTCTTTATCTTTAAGGTTAAGCT  151

seq1  GTTCCCAGGATTGTTTTAACTATGGGGCATACCTGGGTTTGGTTTTCTTT  9650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGGATTGTTTTAACTATGGGGCATACCTGGGTTTGGTTTTCTTT  201

seq1  TTCCTCAGCCCCAGGCAGCCTCTAGGTTGGCAAATAATGAGGAATTTCTG  9700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGCCCCAGGCAGCCTCTAGGTTGGCAAATAATGAGGAATTTCTG  251

seq1  AGTTCGTTGTATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCAGTCA  9750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGTTGTATGACTTACAGGTCTTGAAATTTCATCTTTCTTTCAGTCA  301

seq1  TGTTTTTTTTCTCACCTCTGACACCATTTAAGTTTAACAATTCTTTCGGA  9800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTTCTCACCTCTGACACCATTTAAGTTTAACAATTCTTTCGGA  351

seq1  TTTGGTCTTAAGTACCCTTTCCAATTATAAAACCATAATCTGCATTCTAT  9850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCTTAAGTACCCTTTCCAATTATAAAACCATAATCTGCATTCTAT  401

seq1  GCTCCTTTAGGGACTCCTGAGTTGTATCCTATTTTTTTCTCACCTCTGAC  9900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTAGGGACTCCTGAGTTGTATCCTATTTTTTTCTCACCTCTGAC  451

seq1  ACCATATAGTTAAGAACATTTCCTCAAACAACAGGGATTGATTCCCAGCA  9950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATAGTTAAGAACATTTCCTCAAACAACAGGGATTGATTCCCAGCA  501

seq1  CATTGCTCACAGCCATCGATTCCAGGAGAATCGAGCCCTCTTCTGGACTG  10000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTCACAGCCATCGATTCCAGGAGAATCGAGCCCTCTTCTGGACTG  551

seq1  ATAAGGCATCTGGCACACACTTGAGTCACAGGCAACTCAGAGGAAAATAA  10050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCATCTGGCACACACTTGAGTCACAGGCAACTCAGAGGAAAATAA  601

seq1  CCAAAAAGATGTACTGAAAAATCTAAATGAAAAGAAATGAGTGGGCGGCG  10100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGATGTACTGAAAAATCTAAATGAAAAGAAATGAGTGGGCGGCG  651

seq1  CCATCTTCAGCTCCAGACAGCCGGCCACCTTCCTGGTGAGAGCACGGGGG  10150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTCAGCTCCAGACAGCCGGCCACCTTCCTGGTGAGAGCACGGGGG  701

seq1  TCTGCCCGGCCTGAGAGGTTTGTGGCACAGGCGCCGGCGGGAGCCTTCTT  10200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCGGCCTGAGAGGTTTGTGGCACAGGCGCCGGCGGGAGCCTTCTT  751

seq1  GGCTCCGGGACTCCGCGGAGGGCAGGCTGCACGGGTGACCGTGTGGAATA  10250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCGGGACTCCGCGGAGGGCAGGCTGCACGGGTGACCGTGTGGAATA  801

seq1  CAGAGTGCCAGCCGTTTCTGGGACAGGCGAGAGTCGCAGAGCTTCTGGGC  10300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGCCAGCCGTTTCTGGGACAGGCGAGAGTCGCAGAGCTTCTGGGC  851

seq1  GGTGCCATCTTCAGCTCCAGATAGCCGGCCACCTTCCTGGTGAGAGCACG  10350
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  GGTGCCATCTTCAGCTCCAGATAG-CGGCCACCTTTCTGGTGAGAGCACG  900

seq1  GGGGTCTG  10358
      ||||||||
seq2  GGGGTCTG  908

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BAC

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Alignment Information