BAC Information

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BAC

Clone NameB6Ng01-136O02
ChromosomeX (Build37)
Map Location 159,109,743 - 159,110,306
singlet/doubletsinglet
Overlap genenone
Upstream geneRai2, Gm47, Nhs, Reps2, LOC654358, LOC100041557
Downstream geneLOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051, Grpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136O02.bB6Ng01-136O02.g
ACCDH936537DH936538
length1,2481,081
definitionDH936537|Mus musculus domesticus DNA, BAC clone: B6Ng01-136O02, 5' end.DH936538|Mus musculus domesticus DNA, BAC clone: B6Ng01-136O02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgacaaaaccaaattcatacaatatctttccacgaatccagc
cattcaaaggataataaagggaaaacaccaacacaaagatggaaattaca
ccctagaaatagcaagaaagtaatcctttaacaaaactaaaagaagacag
ccacaaggacagtttcctaactttaacaacaaaaatgacaggaaacacca
aaaacttttctttgatttctcttagcatcaatggactcaattccccaata
aaaagacatagactaacagactggcttcacaaacagaacccaaaattttg
ctgcttacaggaaacccacctcagggataaagacagacactacctcagag
taaaaggctggaaaacaattttccaagcgaatggtctgaataaacaagct
ggagtaaccattataatatcgaataaaattgacttccaacccaaagttat
caaaaaagacaaggaggggcacttcatactgatcaaaggcaaaatctacc
aagatgaactctcaattctgaatatctacgctccaaatgcaagaacagcc
acattcattaaagaaattttagtaaatcttaaagcacacattgcacctca
cacaataatagtaggagacttcaacaccccactctcaccaatggacagat
cctggaaacagaaactaaacagagacacatggacactaacagaagttatg
aaacaaatggatttaacaggtatctattttatcctcaaacaaaattatat
accttcttctcagcacctcatgttacctcctccaaaactgaccatataat
tggtcacaaaacaggcttcaacagatacaaaaatattgaaattatcccat
gcatcctatctgatcaccacggactaaaggctgatctttcaataacagca
taaataatagaaagccaacattcacggtggacactgaacaacactctact
caatgaaaccttggtcaaggaagaaataaaggaaagaaattaaagacttt
tagagtttaatgaaatgaacccacaacataatcaaacttatgggaaacaa
taaaggcagtctaaggaggaaacttaataggtcctggagtgcttcaaaag
gaactagagagagcatacactagcagtctgacggcacacttgaagctctt
gaatgaaggaagcatttcaccaaaggaatagtcagaatatcaacctaggc
ctgatcatcaagttggacaaagagaacattttcaagaaattaaaccca
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctagggtttatctat
cttgtttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgctgtctactcctcttgggtgaatttgctttctttttttctaggg
cttttagatgtgttgtcaagctgctagtatgtgctgtctccgtttcttct
tggaggcactcagcactatgagtttcctcttagaatgctttcaatggtgt
ccaatagttttggtacgtgtggcttcattttcattaactctaaaaagtct
tttaattctttttttattccttccctgacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159109743_159110306
seq2: B6Ng01-136O02.g_591_1149 (reverse)

seq1  TGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTTTTTAGAGTTTAAT  50
      |||||| |||||||||||| |||||| | ||||||||||||||| |||||
seq2  TGGTCAGGGAAGGAATAAAAAAAGAATTAAAAGACTTTTTAGAG-TTAAT  49

seq1  GAAAATGAAGCCACAACGTACCCAAACCTATGGGACA-CAATGAAAGCAT  99
      |||||||||||||| ||||| ||||| |||| ||||| || |||||||| 
seq2  GAAAATGAAGCCAC-ACGTA-CCAAAACTATTGGACACCATTGAAAGCA-  96

seq1  TTCTAAGAGGGAAACTCATAGCGCTGAGTGCCTCCAAGAAGAAACGGGAG  149
      |||||||| |||||||||||| ||||||||||||||||||||||| ||||
seq2  TTCTAAGA-GGAAACTCATAGTGCTGAGTGCCTCCAAGAAGAAAC-GGAG  144

seq1  ACAGCACATACTAGCAGCTTGACAACACATCTAAAAGCCCTAGAAAAAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACATACTAGCAGCTTGACAACACATCTAAAAGCCCTAGAAAAAAA  194

seq1  GGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCA  249
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAAGCAAATTCACCCAAGAGGAGTAGACAGCAGGAAATAATCAAACTCA  244

seq1  GGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAAC  294

seq1  CAAACGAGGAGTTGGTTCTTTGAGAAAATC-AACAAGATAGATAAACCCT  348
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  CAAACGAGGAGTTGGTTCTTTGAGAAAATCAAACAAGATAGATAAACCC-  343

seq1  TAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATC  393

seq1  AGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACAC  443

seq1  CATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGG  493

seq1  ACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAG  543

seq1  GATCAAGTTGACCATC  564
      ||||||||||||||||
seq2  GATCAAGTTGACCATC  559