BAC Information

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BAC

Clone NameB6Ng01-140A06
ChromosomeX (Build37)
Map Location 31,258,355 - 31,259,491
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040458, LOC100040467, EG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205, LOC100040533, LOC100039328, LOC100040552, LOC100040575
Downstream geneLOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298, LOC100039460, LOC100040781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140A06.bB6Ng01-140A06.g
ACCDH938854DH938855
length1,1161,011
definitionDH938854|Mus musculus domesticus DNA, BAC clone: B6Ng01-140A06, 5' end.DH938855|Mus musculus domesticus DNA, BAC clone: B6Ng01-140A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaccagtccacaaaatagaaactacctatcttattctatgaagc
cacaattactctgatacctaaaatcacacaatgacccaacaaagaacaag
aacttcagaccaatcttgcctatggatattttttggagaccatactgtga
gaaaggaagcctttcgcagcttcccaccctaataagccaaatggccttgt
gttaaggagctggtcgcctcctcctccctatctcatgctggcaccaaaga
ccctaaaaagactgaattatccctatctcttcctgactcccaagacttct
aaggacatgagttatgtgctgagcccagcctgaaacccaggacagttaag
gaggaatctacattccagagataagactcagagtgcctcccgcctgcaat
ctgaattcggccttcatgtcctcagatgcccacttctttgttctttgtta
gttacccctcagcccctctctatttcccatgatgtgtgcttataacctgg
catttcagcctaataaactgagaccttgacaggaatcctccttggtctct
gttcttctttcttgctcttttctcttccaggtttgcggtcccccttgcac
ccacgaataactgggtctgctggacgggacagatattgatgcaaaagtac
tcaacaaaattcttgcaaactgaatctaagaatacatcaaaaccgttatt
caccatgatcaattgggtttcatcccttacagggattgttcagtatatgc
aactccttcaacataatatactatataaacaaacccaaggaaagaaacca
catgatcatctcattagatgctgaaacagccttcaatgaaatgtaacacc
cattcatgttaaaagtcttggaaagatcacgagttcacggctcatttcta
aacataataaaagcaatgtactgatactaaacaggcacatgaaattaaat
ggagagaactaaagcaattccactaaagccagggacagacaggttgccca
ctcttttcttatctattcaatacagtactcaaattctagctagaacaagg
tgacaatgtaggaatcagggaatacaaatcagaaaggactaagacaagta
tcactattttcgatga
gaattcttcttgatgaaaattaataactgccacctgcgtgctgttggggg
tgggaatgcatgcccactgcagtcaggctgaagggccttgactgacctgc
gtgaaaaacaaagtccagacagtgaaaggcacagtacaaaagcttctttt
ggggaagtccaggtactccattcaattgtaaatcagcaatgatcaggcca
gacttagagctcccggtgtgggggaggtggttttgagaattgcagaaagg
cttacagcttccctgggagtggcagctgtgctctaatttaactttttggc
taaagaggatttttagccatgatcaaggttagagtcatacttactagaag
attcaggatctgtgtctagttgtcgaactaatctctcaggcagccatcac
gctccgtcttctttttgtgaaaaaaacacagacattcccagaaaaatcag
agacttttccctttcccagattaggaccgggtctggacccttccattcgt
tagttaatgggtcctgccactttaccatggcatataaactagaagtaact
ggatgccagtggcgatccactgcagactgacttttaacatcagtttgcaa
aaaatttagaacaaataaagcaaaagcaagatgtgcctttggtgaccttg
gggggatataactgcccctgtttttttttttttaagatattatttattta
ttttttagatttatttatttattatatgtaagtacactgtagctgtcttc
agacactccagaagagggcatcagacttctttatggatggttatgagtcc
accatgtggttactgggatttgaactcaggaccttcggaggagcagtcag
agctcttaacactgagccatctccgtacccacttgttttgtttttaaaag
ccatttttaatgcactgccgttccactattcctgtccttgagttaggatt
ccgcttatattgatgccgaccatcacagaagagaatatttttgccaatag
gaggaccgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_31258355_31259491
seq2: B6Ng01-140A06.b_49_1164

seq1  GAATTCTACCAGTCCACAAAATAGAAACAAAAGGAACACTACCTATATTA  50
      ||||||||||||||||||||||||||           ||||||||| |||
seq2  GAATTCTACCAGTCCACAAAATAGAA-----------ACTACCTATCTTA  39

seq1  TTCTATGAACCCACAATTACTCTGATACCTGAAATCACACAAAGACCCAA  100
      ||||||||| |||||||||||||||||||| ||||||||||| |||||||
seq2  TTCTATGAAGCCACAATTACTCTGATACCTAAAATCACACAATGACCCAA  89

seq1  CAAAGAACAAGAACTTCAGACCAATCTTGCCTATGGATATTTTTTGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAACAAGAACTTCAGACCAATCTTGCCTATGGATATTTTTTGGAGA  139

seq1  CCATACTGTGAGAAAGGAAGCCTTTCGCAGCTTCCCACCCTAATAAGCAA  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCATACTGTGAGAAAGGAAGCCTTTCGCAGCTTCCCACCCTAATAAGCCA  189

seq1  AATGGCCTTGTGTTAAAGAGCTGGTCGCCTCCTCCTCCCTATCTCATGCT  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATGGCCTTGTGTTAAGGAGCTGGTCGCCTCCTCCTCCCTATCTCATGCT  239

seq1  GGCACCAAAGACCCTAAAAAGACTGAATTATCCCTATCTCTTCCTGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCAAAGACCCTAAAAAGACTGAATTATCCCTATCTCTTCCTGACTC  289

seq1  CCAAGACTTCTAAGGACATGAGTTATGTGCTGAGCCCAGCCTGAAACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACTTCTAAGGACATGAGTTATGTGCTGAGCCCAGCCTGAAACCCA  339

seq1  GGACAGTTAAGGAGGAATCTACATTCCGGAGATAAGACTCAGAGTGCCTC  400
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGACAGTTAAGGAGGAATCTACATTCCAGAGATAAGACTCAGAGTGCCTC  389

seq1  CCACCTGCAATCTGAATTCGGCCTTCATGTCCTCAGATGCCCACTTCTTT  450
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTGCAATCTGAATTCGGCCTTCATGTCCTCAGATGCCCACTTCTTT  439

seq1  GTTCTTTGTTAATTACCCCTCAGCCCCTCCCTATTTCCCCTCGATGTGTG  500
      ||||||||||| ||||||||||||||||| ||||||||| | ||||||||
seq2  GTTCTTTGTTAGTTACCCCTCAGCCCCTCTCTATTTCCCAT-GATGTGTG  488

seq1  CTTATAACCTGGCATTTCAGCCTAATAAACTGAGACCTTGACAGGAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAACCTGGCATTTCAGCCTAATAAACTGAGACCTTGACAGGAATCC  538

seq1  TCCTTGGTCTCTGTTCTTCTTTCTTGCTCTTTTCTCTTCCAGGTTTGCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGTCTCTGTTCTTCTTTCTTGCTCTTTTCTCTTCCAGGTTTGCGG  588

seq1  TCCCCCTTGCACCCATGAATAACTTGGTCTGCTGGACAGGACAGATATTG  650
      ||||||||||||||| |||||||| |||||||||||| ||||||||||||
seq2  TCCCCCTTGCACCCACGAATAACTGGGTCTGCTGGACGGGACAGATATTG  638

seq1  ATGCAAAAGTACTCAACAAAATTCTTGCAAACTGAATCTAATAATACATC  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGCAAAAGTACTCAACAAAATTCTTGCAAACTGAATCTAAGAATACATC  688

seq1  AAAACCTTTATTAACCAGGATCAAGTGGGTTTCATCCCATACAGGGATTG  750
      |||||| ||||| |||| |||||| ||||||||||||| |||||||||||
seq2  AAAACCGTTATTCACCATGATCAATTGGGTTTCATCCCTTACAGGGATTG  738

seq1  TTCAGTATATGCAACTCCTTCAACATAATATACTATATAAACAAACCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATATGCAACTCCTTCAACATAATATACTATATAAACAAACCCAA  788

seq1  GGAAAGAAACCACATGATCATCTCATTAGATGCTGAAACAGCCTTCAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGAAAGAAACCACATGATCATCTCATTAGATGCTGAAACAGCCTTCAATG  838

seq1  AAATGTAACACCCATTCATGTTAAAAGTCTTGGAAAGATGAGGAGTTCAC  900
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  AAATGTAACACCCATTCATGTTAAAAGTCTTGGAAAGATCACGAGTTCAC  888

seq1  GGCTCATTTCGAAACATAATAAAAGCAATATACTGATAATAAACAGGCAA  950
      |||||||||| |||||||||||||||||| |||||||| ||||||||| |
seq2  GGCTCATTTCTAAACATAATAAAAGCAATGTACTGATACTAAACAGGC-A  937

seq1  CATGAAATTAAATGGAGAGAAACTAAAGCAATTCCACTAAAGCCAGGGAC  1000
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CATGAAATTAAATGGAGAG-AACTAAAGCAATTCCACTAAAGCCAGGGAC  986

seq1  AAGACAAGGTTGCCCACTCTTTCCTTATCTATTCAATACAGTACTCAAAA  1050
       |||| |||||||||||||||| ||||||||||||||||||||||| |||
seq2  -AGAC-AGGTTGCCCACTCTTTTCTTATCTATTCAATACAGTACTC-AAA  1033

seq1  TTCTAGCTAGAACAAGTGGACAATATAAGGAAATCAAGGAATACAAATCG  1100
      ||||||||||||||||  |||||| ||  | ||||| |||||||||||| 
seq2  TTCTAGCTAGAACAAGGTGACAATGTA--GGAATCAGGGAATACAAATCA  1081

seq1  GAAAGGACTAAGGCAAAGTATCACTATTTTCAGATGA  1137
      |||||||||||| | |||||||||||||||| |||||
seq2  GAAAGGACTAAGAC-AAGTATCACTATTTTC-GATGA  1116