BAC Information

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BAC

Clone NameB6Ng01-142P21
ChromosomeX (Build37)
Map Location 4,982,936 - 4,984,072
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933, LOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968, LOC546182
Downstream geneMycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751, Nudt10, Bmp15, Shroom4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142P21.bB6Ng01-142P21.g
ACCDH941047DH941048
length1,1511,114
definitionDH941047|Mus musculus domesticus DNA, BAC clone: B6Ng01-142P21, 5' end.DH941048|Mus musculus domesticus DNA, BAC clone: B6Ng01-142P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatcattaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggaagtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcatttcctca
gaaaattggacatagtactaccagaggatcccacaatacctctcctgggc
atatatccagaagatgttccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccaatg
tccctcaacagaggaatggatacagaaaatgtggtacatttacacagttg
agtaatggagtactactcagctattaaaaagaatgaatttatgaaattcc
taggcaaatggatggatctggaggatatcatcctgtgtgtggtaacccaa
tcacaaaagaactcacatgatatgcactcactgataagtggatattagcc
cagaaacttagaatacccaagatataagatacaatttgataaacacatga
aactcaagaagaacgaagaccaaagtgtggacactttgccccttcttaga
attgggaacaaaacacccatggaaggagtaacagaaacaaagtttggaac
tgagacgaaaggatggaccatctaaagactgccacacctgggtatccatc
caataatcagcctccaaacgctgacaccattgcataagccagcaagaatt
tgctgaaaggaccgtgatatagctgtctcttgtgatgctatgctggtgcc
tgtcaaacacagaagtggatgctcacagtcagttattggatggacacagg
acccccagtagagagctagtgaaagtacccaggagctaaggggtctgtac
cctatagtgacacatatgactaacagtaccctggagctcatgtctctagc
tgcattatagcagagatgactagtagcatcattgggaagaaaggtcctgt
tgcactttattgcttcagtacagggatgccaggccagaaagtgaatggtg
t
gaattctctgtttagctctgtaccccatttttaattgggttatttccttg
ttggagtctaacttcttgagttctttatatattttggagagccctctgtc
agatatagggttggtgaagatctttccccattctgtagactgttgttttg
tcttattgatggtgggttttgccttacagaagcttttcagtttcatgagg
tcccatttatcaattgttaatcttagagcctgagccactggtgttctgct
taggagtttgtctcctgtaccaacacattcaagacaattcccactttctt
ttctgttagatttagtgtatctggttttatgttgaggtctgtgatctact
tggacttgagttttgtgcagggtgataattatgtatctatttgcattctt
ctacatgcagacatccagttagactagcaccatttgttgaagatgttttc
ttttttttcccattgtacggttttggcttccttattcgtttaaatatctt
ctgcttctttctaccttccctgtgagtctgagattccaattcacactcct
gttatgctgacctctgccttcagcattattatttttctcttctattcctc
ttaaactttatttctattgtttcttacaaggcttctgatttgccaattat
tcttaagcataagctattaaattcatccattttttctctttaatactttc
tagcttataattttaatttgatatttttctaattgatatatacctcatta
tgctgtagattccctgttgaatttctggcttggaatttatttctttgtac
atataaatatttctgttttataatttagtatagcaatattttatggtcat
tgtatattgttgtttttaatggtttattattctttgaaaatttatgtacg
taccctgttatgttcatctcctaatgccccttctaactctctttgattct
ccaacatattccatgttccgatgcatatatctgccactttaagtatatat
cccaattatacgtcgaaactggggaatattataaatgctcacacccacag
attaagtacgctatacatataacagtgacttgaagagcaccctagctttc
tcgtgggtaaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_4982936_4984072
seq2: B6Ng01-142P21.g_71_1184

seq1  GAATTCTCTGTTTAGCTCTGTACCCCATTTTTAATTGGGTTATTTCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGCTCTGTACCCCATTTTTAATTGGGTTATTTCCTTG  50

seq1  TTGGAGTCTAACTTCTTGAGTTCTTTATATATTTTGGAGAGCCCTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTCTAACTTCTTGAGTTCTTTATATATTTTGGAGAGCCCTCTGTC  100

seq1  AGATATAGGGTTGGTGAAGATCTTTCCCCATTCTGTAGACTGTTGTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAGGGTTGGTGAAGATCTTTCCCCATTCTGTAGACTGTTGTTTTG  150

seq1  TCTTATTGATGGTGGGTTTTGCCTTACAGAAGCTTTTCAGTTTCATGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGATGGTGGGTTTTGCCTTACAGAAGCTTTTCAGTTTCATGAGG  200

seq1  TCCCATTTATCAATTGTTAATCTTAGAGCCTGAGCCACTGGTGTTCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTATCAATTGTTAATCTTAGAGCCTGAGCCACTGGTGTTCTGCT  250

seq1  TAGGAGTTTGTCTCCTGTACCAACACATTCAAGACAATTCCCACTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTTTGTCTCCTGTACCAACACATTCAAGACAATTCCCACTTTCTT  300

seq1  TTCTGTTAGATTTAGTGTATCTGGTTTTATGTTGAGGTCTGTGATCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTAGATTTAGTGTATCTGGTTTTATGTTGAGGTCTGTGATCTACT  350

seq1  TGGACTTGAGTTTTGTGCAGGGTGATAATTATGTATCTATTTGCATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTGAGTTTTGTGCAGGGTGATAATTATGTATCTATTTGCATTCTT  400

seq1  CTACATGCAGACATCCAGTTAGACTAGCACCATTTGTTGAAGATGTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGCAGACATCCAGTTAGACTAGCACCATTTGTTGAAGATGTTTTC  450

seq1  TTTTTTTTCCCATTGTACGGTTTTGGCTTCCTTATTCGTTTAAATATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCCCATTGTACGGTTTTGGCTTCCTTATTCGTTTAAATATCTT  500

seq1  CTGCTTCTTTCTACCTTCCCTGTGAGTCTGAGATTCCAATTCACACTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTTCTACCTTCCCTGTGAGTCTGAGATTCCAATTCACACTCCT  550

seq1  GTTATGCTGACCTCTGCCTTCAGCATTATTATTTTTCTCTTCTATTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCTGACCTCTGCCTTCAGCATTATTATTTTTCTCTTCTATTCCTC  600

seq1  TTAAACTTTATTTCTATTGTTTCTTACAAGGCTTCTGATTTGCCAATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTTTATTTCTATTGTTTCTTACAAGGCTTCTGATTTGCCAATTAT  650

seq1  TCTTAAGCATAAGCTATTAAATTCATCCATTTTTTCTCTTTAATACTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGCATAAGCTATTAAATTCATCCATTTTTTCTCTTTAATACTTTC  700

seq1  TAGCTTATAATTTTAATTTGATATTTTTCTAATTGATATATACCTCATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTATAATTTTAATTTGATATTTTTCTAATTGATATATACCTCATTA  750

seq1  TGCTGTAGATTCCCTGTTGAATTTCTGGCTTGGAATTTATTTCTTTGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAGATTCCCTGTTGAATTTCTGGCTTGGAATTTATTTCTTTGTAC  800

seq1  ATATAAATATTTCTGTTTTATAATTTAGTATAGCAATATTTTATGGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATATTTCTGTTTTATAATTTAGTATAGCAATATTTTATGGTCAT  850

seq1  TGTATATTTGTTTGTTTTTTAATGGTTTTATTTATTCTTTGAAAAATTTT  900
      |||||| |||||   |||||||||||||   ||||||||||||||  |||
seq2  TGTATA-TTGTT--GTTTTTAATGGTTT--ATTATTCTTTGAAAA--TTT  893

seq1  ATGTACGTACCCTGTTTATGTTCATCTTCCTAATGCCCCCTTCTAACTCT  950
      |||||||||||||| ||||||||||| |||||||| ||||||||||||||
seq2  ATGTACGTACCCTG-TTATGTTCATC-TCCTAATG-CCCCTTCTAACTCT  940

seq1  CCTTTTGATTCTTCCAACATATTCCATGTTCCGATGCATATATCTGCCAA  1000
      |  |||||||| |||||||||||||||||||||||||||||||||||| |
seq2  C--TTTGATTC-TCCAACATATTCCATGTTCCGATGCATATATCTGCC-A  986

seq1  CTTATAAGTATAATATCCAAATTATACAGTCAGAAACTGGGAAAATAATA  1050
      ||| ||||||| |||||| |||||||| ||| ||||||||| ||   || 
seq2  CTT-TAAGTAT-ATATCCCAATTATAC-GTC-GAAACTGGGGAA--TATT  1030

seq1  ATAAATGGCTCACA-CCACAGATTAAGGTACGC-ATACCATATACCAAGT  1098
      |||||| ||||||| ||||||||||| |||||| ||| |||||| | |||
seq2  ATAAAT-GCTCACACCCACAGATTAA-GTACGCTATA-CATATAAC-AGT  1076

seq1  GACTTGAAGAGCA-GCTAGCTTTCT-GTGGGTACAGAAATA  1137
      |||||||||||||  |||||||||| |||||||   |||||
seq2  GACTTGAAGAGCACCCTAGCTTTCTCGTGGGTA---AAATA  1114