BAC Information

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BAC

Clone NameB6Ng01-144O21
ChromosomeX (Build37)
Map Location 143,874,703 - 143,875,521
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666730, EG245663, Htr2c, Il13ra2
Downstream geneV1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545, LOC666837, LOC100039553
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144O21.bB6Ng01-144O21.g
ACCDH942476DH942477
length1,209959
definitionDH942476|Mus musculus domesticus DNA, BAC clone: B6Ng01-144O21, 5' end.DH942477|Mus musculus domesticus DNA, BAC clone: B6Ng01-144O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatagcgaatcgctgattatctcctaaaaaaaat
gttcaacatttttagtcatcagggaaatgcaaatcaaagcaaccccgaga
ttccacctcacaccagtcacaatggctaagatcaaaaactcaggtgacag
cagatgctggcaatgatgtagagaaagaggaacagtcctccattgctggt
gggattgcaagctggtacaaccactctggaaattattttagcagttcctc
agaaaattggacatactactaccagaggactgaacaataccactcctggg
catctattcagaagatgctacaacttgtagtaaggacaggtgctccatta
tgttcgttgcacccttatttataacagcccaaatctggaaagaaccctca
acagagaaattgatacaaaaagtgtggtttatttacacagtggagtactg
cgtagctattaaaaacaatgaatttatgaaattcttatacaaatggatgg
atctggaggatatcatcctgaatgaaataacccaattacattagaacaca
cattatatgtactcagtgagcagtggatattagcccagaagttcagaata
cccaagatacaattctcaaaacacatgaaagtcaagaagaaggaataaca
atgtgtggatactttaatctttcttagaatagggaacaaaatatttatgg
atggagttacagagacaaagtgtgaagcagagactgaaggaatggccatc
cagagactgccccatctggggatctatccaatagacaaccatcaaaccca
gactctattgtggaaaccaacaagtgcttgctgacaggagtctgatatag
ctgtctcctgggaggctctgccattgcctggcaaattcagaagtggatgc
tacagtcatccatttgatggagcacagggtctccagtgaagagctataga
aagtatcaatggctgaagggtttgcagtcctcctcggagacaaaaatatg
aactaatagtactctcagggctccctggactaaaccactaatcaagaaaa
cacatggtgggactcatagctctagctgctatgtagaagagatgcaagtt
gtcatcaattgaagagaagccttccttgtgagtttcattgcctcagtaag
ggaatgccagtccgagttagagatgactgatgaacaggtaggttagggga
catgatgtc
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgtgttctttatatatgttggatattagtccc
ctctctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattcttgatcttacagcacaagccattgctgat
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtttctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatagac
tagactaatttttaactgacaaatgaattcctaatggtttcatggaatgt
gcttcatcaagttcataatggtgatatgtgtgtctacctcctacttcttt
catcactgcttcattctcacacgttattctgccaaaagcctgaggttaat
caggccttgattttggtaatcactttgcagaagatgccaggttttttcat
cagggcagccaagtaaaaagtggtggatagatccaggaaggggtatgtac
aaaatacatacacatatatgatttcaggtgaaggaggagagacaggaatg
ccataacttcctgtgttagagggatgtagactcttctaatggatacaaac
aacaaaaatcccctctcacagggaaaatgcttttagggaaagaggattat
ttcctgtttgtggaaattcctcttgtgtctatcatcctctgattggcata
cctttaaatgctttcaggagtatgattatgagattttttttcataaagag
ttttaccaaatatttaacaaatcaatgaccctctcccatgcatgcccagt
tctgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_143874703_143875521
seq2: B6Ng01-144O21.g_213_1025 (reverse)

seq1  ACACACACGAACTTGGGCATGCATGGGAGAGGGTCATTGATTTGTTAAAT  50
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  ACACACA-GAAC-TGGGCATGCATGGGAGAGGGTCATTGATTTGTTAAAT  48

seq1  ATTTGGTAAAACTCTTTTATGGAAAAAAAATCTCATAATCATACTTCCCT  100
      |||||||||||||| ||||| ||||||||||||||||||||||||  |||
seq2  ATTTGGTAAAACTC-TTTAT-GAAAAAAAATCTCATAATCATACT--CCT  94

seq1  GAAAGCATTTAAAGGTATGCCAATCAGAGGATGATAGACACAAGAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATTTAAAGGTATGCCAATCAGAGGATGATAGACACAAGAGGAAT  144

seq1  TTCCACAAACAGGAAATAATCCTCTTTCCCTAAAAGCATTTTCCCTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAAACAGGAAATAATCCTCTTTCCCTAAAAGCATTTTCCCTGTGA  194

seq1  GAGGGGATTTTTGTTGTTTGTATCCATTAGAAGAGTCTACATCCCTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGATTTTTGTTGTTTGTATCCATTAGAAGAGTCTACATCCCTCTAA  244

seq1  CACAGGAAGTTATGGCATTCCTGTCTCTCCTCCTTCACCTGAAATCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAAGTTATGGCATTCCTGTCTCTCCTCCTTCACCTGAAATCATAT  294

seq1  ATGTGTATGTATTTTGTACATACCCCTTCCTGGATCTATCCACCACTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATGTATTTTGTACATACCCCTTCCTGGATCTATCCACCACTTTT  344

seq1  TACTTGGCTGCCCTGATGAAAAAACCTGGCATCTTCTGCAAAGTGATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGCTGCCCTGATGAAAAAACCTGGCATCTTCTGCAAAGTGATTAC  394

seq1  CAAAATCAAGGCCTGATTAACCTCAGGCTTTTGGCAGAATAACGTGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCAAGGCCTGATTAACCTCAGGCTTTTGGCAGAATAACGTGTGAG  444

seq1  AATGAAGCAGTGATGAAAGAAGTAGGAGGTAGACACACATATCACCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCAGTGATGAAAGAAGTAGGAGGTAGACACACATATCACCATTA  494

seq1  TGAACTTGATGAAGCACATTCCATGAAACCATTAGGAATTCATTTGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTGATGAAGCACATTCCATGAAACCATTAGGAATTCATTTGTCAG  544

seq1  TTAAAAATTAGTCTAGTCTATCGATCCATACTTATCTCCTTGTACTAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTAGTCTAGTCTATCGATCCATACTTATCTCCTTGTACTAAGG  594

seq1  TCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAAACACTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAAACACTGAAA  644

seq1  CTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGA  694

seq1  AAAATTCCTGAACAGATCAGCAATGGCTTGTGCTGTAAGATCAAGAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCTGAACAGATCAGCAATGGCTTGTGCTGTAAGATCAAGAATTG  744

seq1  ACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACC  794

seq1  GTCAATAAGACAAAAAGAC  819
      |||||||||||||||||||
seq2  GTCAATAAGACAAAAAGAC  813