BAC Information

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BAC

Clone NameB6Ng01-145P24
ChromosomeX (Build37)
Map Location 133,371,878 - 133,490,432
singlet/doubletdoublet
Overlap genePlp1, Rab9b, 1700014N06Rik, LOC621984, LOC100034363, 4930488E11Rik
Upstream geneGprasp2, Bhlhb9, LOC100041110, 2900062L11Rik, 6530401D17Rik, Bex2, Nxf3, Bex4, Tceal8, Tceal5, Bex1, LOC100040972, Wbp5, Ngfrap1, LOC666180, LOC237048, LOC666196, Kir3dl2, LOC100041079, Kir3dl1, Tceal3, Tceal1, Morf4l2, BC065397, Glra4, LOC100041122
Downstream geneLOC666244, 2810402A17Rik, Zcchc18, BC031748, LOC666277, LOC436231, LOC666288, LOC100041260, LOC100041272, LOC669737, Esx1, EG666303, Il1rapl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145P24.bB6Ng01-145P24.g
ACCDH943254DH943255
length1841,078
definitionDH943254|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P24, 5' end.DH943255|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,490,249 - 133,490,432)(133,371,878 - 133,372,941)
sequence
gaattctttttaatggtgcaggtttcaaacaccaggccttagttcacagt
agctaagccttgtacaaactctaggaagacactagacattagaaaaatcc
tctgctaatgatatataagtatatatatgtttatgtatatgtatatgtgt
atatgtatatatgtatatgtgtgtgtgtatatgt
gaattcccccaagtagtctaccatttgtagaactaggcttgataaatttg
aacctcaatttgaataattggtctggtattttcttttctaataaatgaca
gatgattttacttgctaatattatctcagcattttgataatttaggctta
ccatagaagttactgtctcttggtatatataggtcacataatagattctg
ccagctgttagctgttcagttcataagcttccatagagctctggagccgc
agagaggacaggcagaatttgaaacctaaagaactcccagatttcaggct
tatcctgtatttgttaactttgggtgaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaaaagaaaggaaggaaggaaggaaggaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
agaaaaaaaaagcccctgatcgaatttcctggaggaaaagttattgtagc
tgtttcattgtagatttgtgctgtcattccccaaagtgctttctgctgtg
ttgaaagagatataagaatttacaagaagacacttgagacttgttcttgg
gccaatatataaggtaaacaagcaggatgcacaagagtgaggagagctaa
aaggacatgtaagaaaccaatcaagatcaaggaaggtgaaataatctata
tctttttattttgttttggttaatataacagataacaaaccaattccttt
aaaaatctcacatgcacacacacacacaacacacatacacacgtacaaag
gagaggttaatcaactggcaagtgtttcctttcattcctgatagagaatt
tttgattttaacacctaaaggataaacttttagaaacctcatcttacaaa
atgtattttataaaatgaaggaaaattaaattaagaatgttctcaatcaa
acatcgtgtcctttgagagtggaattggttctatttggaccttcaataac
aggtaactcttaattaatagtatagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_133490249_133490432
seq2: B6Ng01-145P24.b_44_227 (reverse)

seq1  ACATATACACATACACATATACATATATACATATACACATATACATATAC  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACATATACACACACACATATACATATATACATATACACATATACATATAC  50

seq1  ATAAACATATATATACTTATATATCATTAGCAGAGGATTTTTCTAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATATATATACTTATATATCATTAGCAGAGGATTTTTCTAATGTC  100

seq1  TAGTGTCTTCCTAGAGTTTGTACAAGGCTTAGCTACTGTGAACTAAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCTTCCTAGAGTTTGTACAAGGCTTAGCTACTGTGAACTAAGGCC  150

seq1  TGGTGTTTGAAACCTGCACCATTAAAAAGAATTC  184
      ||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTGAAACCTGCACCATTAAAAAGAATTC  184

seq1: chrX_133371878_133372941
seq2: B6Ng01-145P24.g_71_1148

seq1  GAATTCCCCCAAGTAGTCTACCATTTGTAGAACTAGGCTTGATAAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCAAGTAGTCTACCATTTGTAGAACTAGGCTTGATAAATTTG  50

seq1  AACCTCAATTTGAATAATTGGTCTGGTATTTTCTTTTCTAATAAATGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAATTTGAATAATTGGTCTGGTATTTTCTTTTCTAATAAATGACA  100

seq1  GATGATTTTACTTGCTAATATTATCTCAGCATTTTGATAATTTAGGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTTACTTGCTAATATTATCTCAGCATTTTGATAATTTAGGCTTA  150

seq1  CCATAGAAGTTACTGTCTCTTGGTATATATAGGTCACATAATAGATTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGAAGTTACTGTCTCTTGGTATATATAGGTCACATAATAGATTCTG  200

seq1  CCAGCTGTTAGCTGTTCAGTTCATAAGCTTCCATAGAGCTCTGGAGCCGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGTTAGCTGTTCAGTTCATAAGCTTCCATAGAGCTCTGGAGCCGC  250

seq1  AGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTCCCAGATTTCAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTCCCAGATTTCAGGCT  300

seq1  TATCCTGTATTTGTTAACTTTGGGTGAAAGAAAGAAAGAAAGAAAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGTATTTGTTAACTTTGGGTGAAAGAAAGAAAGAAAGAAAGAAAG  350

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  400

seq1  AGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAGAA  450
      |||||||||||||||||||||||||||||||||||||||||    |||||
seq2  AGAAAGAAAGAAAGAAAAAGAAAGGAAGGAAGGAAGGAAGG----AAGAA  446

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  496

seq1  AAAGAGAAAAAAAAAGCCCCTGATCGAATTTCCTGGAGGAAAAGTTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAAAAAAAAGCCCCTGATCGAATTTCCTGGAGGAAAAGTTATTG  546

seq1  TAGCTGTTTCATTGTAGATTTGTGCTGTCATTCCCCAAAGTGCTTTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTTTCATTGTAGATTTGTGCTGTCATTCCCCAAAGTGCTTTCTGC  596

seq1  TGTGTTGAAAGAGATATAAGAATTTACAAGAAGACACTTGAGACTTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGAAAGAGATATAAGAATTTACAAGAAGACACTTGAGACTTGTTC  646

seq1  TTGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGAGGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCAATATATAAGGTAAACAAGCAGGATGCACAAGAGTGAGGAGAG  696

seq1  CTAAAAGGACATGTAAGAAACCAATCAAGATCAAGGAAGGTGAAATAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGACATGTAAGAAACCAATCAAGATCAAGGAAGGTGAAATAATC  746

seq1  TATATC-TTTTATTTTGTTTTGGTTTAATATAACAGATAACCAACC-ATT  798
      |||||| |||||||||||||||| ||||||||||||||||| |||| |||
seq2  TATATCTTTTTATTTTGTTTTGG-TTAATATAACAGATAACAAACCAATT  795

seq1  CCCTTAAAAATCTCACATGCACACACACACAC-ACACACACACACACGTA  847
      || ||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  CCTTTAAAAATCTCACATGCACACACACACACAACACACATACACACGTA  845

seq1  CAAA-GAGA-GTTAATCAACT-GCAAGTGTTTCC-TTCATTTCTGATAGA  893
      |||| |||| ||||||||||| |||||||||||| |||||| ||||||||
seq2  CAAAGGAGAGGTTAATCAACTGGCAAGTGTTTCCTTTCATTCCTGATAGA  895

seq1  GAA-TTTTGATTTTAACAACATAAAGGATAAACTTTTAGAAA-CTCATCT  941
      ||| ||||||||||||| || ||||||||||||||||||||| |||||||
seq2  GAATTTTTGATTTTAAC-ACCTAAAGGATAAACTTTTAGAAACCTCATCT  944

seq1  TACAAAATGTATTTTATAAAATTAAAGAAAATAAAATTAAGAATGTTCTC  991
      |||||||||||||||||||||| || |||||| |||||||||||||||||
seq2  TACAAAATGTATTTTATAAAATGAAGGAAAATTAAATTAAGAATGTTCTC  994

seq1  AATCAAACATCGTGTCCTTTGAG---TGAATT-GTTCTATTT-GACC-TC  1035
      |||||||||||||||||||||||    ||||| ||||||||| |||| ||
seq2  AATCAAACATCGTGTCCTTTGAGAGTGGAATTGGTTCTATTTGGACCTTC  1044

seq1  AATAACAGGTA---CTTAATT-ATAGT-TAGCTC  1064
      |||||||||||   ||||||| ||||| ||||||
seq2  AATAACAGGTAACTCTTAATTAATAGTATAGCTC  1078