BAC Information

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BAC

Clone NameB6Ng01-147F05
ChromosomeX (Build37)
Map Location 13,904,900 - 13,905,719
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668990, LOC100043947, LOC100043948, Nyx, LOC675416, Cask, Gpr34, Gpr82, LOC385327, EG385328
Downstream geneLOC668991, 4930403L05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147F05.bB6Ng01-147F05.g
ACCDH944239DH944240
length1,132818
definitionDH944239|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F05, 5' end.DH944240|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgggagtttaagctattactggttccatgttttattcacac
cccaggagatactgggcacaaagaagttctgtgtttaagtacagagaaga
acgtccctttgttatcctccgaggaccaaatgaacagtcggtgttcatcc
cactgtttccaagtcaccttgctatgataccagatggtaagactatcaag
ttggtcccactagcctacaacttactgtgttcctggagtaatttttcctg
attaaaagtattcgttttatttttttaatagattattttgagagtttcac
acatgagcattgcatctatgttatgccagcctctaccttcctctctaact
ccctcccaaatttggaatctctttttaacattattattgctatatgcata
tatattgtatgtgacctactatattcattgttttgcttgtatgtacatgt
gtccagggattggactgcttgggatggtcaacctatcaggagcttctccc
tggaagaaactgattctccctctctcagaaaccattggccacctgtagct
ctctatctaagaataggatcatatggaatttctcctgtccatgtgaccat
gacatttggtgttgccattatgctagctttgttcagaaaactatacgttg
gaagatcatggatactttttaccctgccatgtctagggcacacttatcta
tgaacaggtgttctgctcctctggcttttacaatattaatagcctctcct
acatgactttacttcagccttaagtgtaggggttgggttacagatatatc
agtggggaacctatggttatgggtctctttaatagtttccatctgttgca
aaaagaaagtttttgatgagtgaggattaaataatctgtgggtataagga
taggaagcaactcgtattgtcttagaaaatggcatagtaagttctaccct
ctgtatataacctctctagcactggcagtcagctagaaatcaagtatcag
gcatgttttcctcctgtaagcagccttaaagtccaataaacaccttttgg
tgcctccagaataatggtgcaccattgaccattttttggcatatctacca
tatcagacatgttagtgattgcaagctgtaaa
gaattcaatctactgtagaacacataaccaaaagtattacttaacaactg
tattatcactgacacaaatatgactgaaatttacttaagcaccataatct
taagattctccaaaggtgggaaaggatgagccctgcctgacaccttccta
gataccccatctccatgttatttacctcctacttagcaaagaatattttc
tatgcccattcctaatcttatcagtggtcaaaaaaaattatgctagaaag
cattctctcactgaggttgggaatagttcctgaagcatagtggtctgata
tctgaatataaaagaattatggttatataaaagataaagtaatatggtag
ttgtgaagattatcaatagtcactgctttaaggtctttgagatggtcata
agagtttcaaaccatgaaaaattacaatagaggtgcatctatagagggaa
gtcttagaaatgagtgataagctgaaattagaagggtgaatgagaatttt
acagagagagcagaaagataaacatagtgtataggcctgatactacttgt
attctaaaactaatactggtttctgaaaacctggttgcctcagagacaag
agaatctgcacatagacccacgtagcactatgtgaccttgctcccaagtt
attactgattgttaaatagataccaatagctaggcagaacagacatgtgg
gggttaggattccctggctagaggtcagagaagaaccatgggggtcgagt
ggtagggagaagaagtaaaggatgagagagagtctcctattccttactat
gttcatctgtgtttcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_13904900_13905719
seq2: B6Ng01-147F05.g_70_887

seq1  GAATTCAATCTACTGTAGAACACATAACCAAAAGTATTACTTAACAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTACTGTAGAACACATAACCAAAAGTATTACTTAACAACTG  50

seq1  TATTATCACTGACACAAATATGACTGAAATTTACTTAAGCACCATAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCACTGACACAAATATGACTGAAATTTACTTAAGCACCATAATCT  100

seq1  TAAGATTCTCCAAAGGTGGGAAAGGATGAGCCCTGCCTGACACCTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTCTCCAAAGGTGGGAAAGGATGAGCCCTGCCTGACACCTTCCTA  150

seq1  GATACCCCATCTCCATGTTATTTACCTCCTACTTAGCAAAGAATATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCCATCTCCATGTTATTTACCTCCTACTTAGCAAAGAATATTTTC  200

seq1  TATGCCCATTCCTAATCTTATCAGTGGTCAAAAAAAATTATGCTAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCATTCCTAATCTTATCAGTGGTCAAAAAAAATTATGCTAGAAAG  250

seq1  CATTCTCTCACTGAGGTTGGGAATAGTTCCTGAAGCATAGTGGTCTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCACTGAGGTTGGGAATAGTTCCTGAAGCATAGTGGTCTGATA  300

seq1  TCTGAATATAAAAGAATTATGGTTATATAAAAGATAAAGTAATATGGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATAAAAGAATTATGGTTATATAAAAGATAAAGTAATATGGTAG  350

seq1  TTGTGAAGATTATCAATAGTCACTGCTTTAAGGTCTTTGAGATGGTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAGATTATCAATAGTCACTGCTTTAAGGTCTTTGAGATGGTCATA  400

seq1  AGAGTTTCAAACCATGAAAAATTACAATAGAGGTGCATCTATAGAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTCAAACCATGAAAAATTACAATAGAGGTGCATCTATAGAGGGAA  450

seq1  GTCTTAGAAATGAGTGATAAGCTGAAATTAGAAGGGTGAATGAGAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGAAATGAGTGATAAGCTGAAATTAGAAGGGTGAATGAGAATTTT  500

seq1  ACAGAGAGAGCAGAAAGATAAACATAGTGTATAGGCCTGATACTACTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGCAGAAAGATAAACATAGTGTATAGGCCTGATACTACTTGT  550

seq1  ATTCTAAAACTAATACTGGTTTCTGAAAACCTGGTTGCCTCAGAGACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAACTAATACTGGTTTCTGAAAACCTGGTTGCCTCAGAGACAAG  600

seq1  AGAATCTGCACATAGACCCACGTAGCACTATGTGACCTTGCTCCCAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGCACATAGACCCACGTAGCACTATGTGACCTTGCTCCCAAGTT  650

seq1  ATTACTGATTGTTAAATAGATACCAATAGCTAGGCAGAACAGACATGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGATTGTTAAATAGATACCAATAGCTAGGCAGAACAGACATGTGG  700

seq1  GGGTTAGGATTCCCTGGCTAGAGGTCAGAGAAGAACCATGGGGGTCGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGATTCCCTGGCTAGAGGTCAGAGAAGAACCATGGGGGTCGAGT  750

seq1  GGTAGGGAGAAGAAGGTAAAGGATGAGAGAGAGTCTCCTATTCCTTACTA  800
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTAGGGAGAAGAA-GTAAAGGATGAGAGAGAGTCTCCTATTCCTTACTA  799

seq1  TGTTTCATCTGTGTTTCATC  820
      || |||||||||||||||||
seq2  TG-TTCATCTGTGTTTCATC  818