MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-147K03
Chromosome	X (Build37)
Map Location	17,217,356 - 17,218,501
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Maoa, Maob, Ndph, LOC100043063, Efhc2, Fundc1, EG278181
Downstream gene	EG668994, EG436196, EG331391, Dusp21, LOC100043951, Utx, LOC100043952, 4930578C19Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Maoa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17161 MGI:96915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Maob (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109731 MGI:96916
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17986 MGI:102570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043063 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Efhc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74405 MGI:1921655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fundc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72018 MGI:1919268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG278181 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278181 MGI:3643718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins

name	EG668994 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668994 MGI:3645165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins pseudo : _no_value

name	EG436196 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436196 MGI:3646107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins

name	EG331391 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331391 MGI:3643621
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins

name	Dusp21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73547 MGI:1920797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043951 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Utx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22289 MGI:1095419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043952 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	4930578C19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75905 MGI:1923155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Maoa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579838 GeneID:17161 MGI:96915
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monoamine oxidase A transcript_id : NM_173740.2

name	Maob (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27370153 GeneID:109731 MGI:96916
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monoamine oxidase B transcript_id : NM_172778.1

name	Ndph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098076 GeneID:17986 MGI:102570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Norrie disease homolog transcript_id : NM_010883.2

name	LOC100043063 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270999 GeneID:100043063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043063 transcript_id : XM_001477606.1

name	Efhc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348726 GeneID:74405 MGI:1921655
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EF-hand domain (C-terminal) containing 2 transcript_id : NM_028916.2

name	Fundc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381937 GeneID:72018 MGI:1919268
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FUN14 domain containing 1 transcript_id : NM_028058.2

name	EG278181 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271052 GeneID:278181 MGI:3643718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins product : predicted gene, EG278181 transcript_id : XM_205276.2

name	EG436196 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271054 GeneID:436196 MGI:3646107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins product : predicted gene, EG436196 transcript_id : XM_488332.2

name	EG331391 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271056 GeneID:331391 MGI:3643621
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins product : predicted gene, EG331391 transcript_id : XM_285437.3

name	Dusp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037324 GeneID:73547 MGI:1920797
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 21 transcript_id : NM_028568.1

name	Utx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859491 GeneID:22289 MGI:1095419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitously transcribed tetratricopeptide repeat gene, X chromosome transcript_id : NM_009483.1

name	4930578C19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347804 GeneID:75905 MGI:1923155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930578C19 gene transcript_id : NM_175228.3

name	Maoa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579839 CCDS:CCDS30033.1 GeneID:17161 MGI:96915
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence TAS] [Evidence IDA] GO_function : GO:0008131 - amine oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006584 - catecholamine metabolism [Evidence IEA]; GO:0042420 - dopamine catabolism [Evidence IDA]; GO:0006118 - electron transport [Evidence IEA]; GO:0042135 - neurotransmitter catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : monoamine oxidase A protein_id : NP_776101.2

name	Maob (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370154 GeneID:109731 MGI:96916
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] codon_start : 1 exception : mismatches in translation product : amine oxidase (flavin-containing) protein_id : NP_766366.1

name	Ndph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754808 CCDS:CCDS30034.1 GeneID:17986 MGI:102570
definition	GO_process : GO:0001890 - placenta development [Evidence IMP] codon_start : 1 product : Norrie disease homolog protein_id : NP_035013.1

name	LOC100043063 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271000 GeneID:100043063
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477656.1

name	Efhc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037365 GeneID:74405 MGI:1921655
definition	codon_start : 1 exception : mismatches in translation product : EF-hand domain (C-terminal) containing 2 protein_id : NP_083192.1

name	Fundc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312526 CCDS:CCDS30035.1 GeneID:72018 MGI:1919268
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : FUN14 domain containing 1 protein_id : NP_082334.1

name	EG278181 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271053 GeneID:278181 MGI:3643718
definition	codon_start : 1 product : similar to KIAA0026 protein_id : XP_205276.2

name	EG436196 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271055 GeneID:436196 MGI:3646107
definition	codon_start : 1 product : similar to KIAA0026 protein_id : XP_488332.2

name	EG331391 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271057 GeneID:331391 MGI:3643621
definition	codon_start : 1 product : similar to KIAA0026 protein_id : XP_285437.3

name	Dusp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037325 CCDS:CCDS30036.1 GeneID:73547 MGI:1920797
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : novel dual specificity phosphatase, catalytic domain containing protein product : dual specificity phosphatase 21 protein_id : NP_082844.1

name	Utx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859492 CCDS:CCDS30037.1 GeneID:22289 MGI:1095419
definition	GO_component : GO:0005742 - mitochondrial outer membrane translocase complex [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA] codon_start : 1 product : ubiquitously transcribed tetratricopeptide repeat gene, X chromosome protein_id : NP_033509.1

name	4930578C19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424860 CCDS:CCDS30038.1 GeneID:75905 MGI:1923155
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC75905 protein_id : NP_780437.1

name	LOC100043951 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043951
definition	number : 1 pseudo : _no_value

name	LOC100043952 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043952
definition	number : 2 pseudo : _no_value

name	LOC100043952 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043952
definition	number : 1 pseudo : _no_value

name	EG668994 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94407022 GeneID:668994 MGI:3645165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins product : predicted gene, EG668994 pseudo : _no_value transcript_id : XR_002283.1

clone name	MSMg01-425J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332L07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-524M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272E08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-326J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-151H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-127M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348A08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-387O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-147K03.b	B6Ng01-147K03.g
ACC	DH944460	DH944461
length	1,199	1,139
definition	DH944460\|Mus musculus domesticus DNA, BAC clone: B6Ng01-147K03, 5' end.	DH944461\|Mus musculus domesticus DNA, BAC clone: B6Ng01-147K03, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcaactgaggaataccaaatggctgagaagtacctgaaaaaaaa atgttcagcatccttaatcatcagggaaatacaaatcaaaacaaccatga gattccacctcaccccagtcataatggctaagatcaaaaattcatgtgac agcagatgctgacgaggatgtggagaaataggaacactcctccgttgttg gtgagattgcaagcttgtacaaccactctggaaatcagtctggctgttcc tcagaaaattggacatagtactacctgaggacccagcaataccccttctg ggcatgtacccagaagatattccaactggtaatatggacacatgctccac tatgttcatagcagccatatttataatagccagaaggttgaaagaaccca gatgcccctcaacagaggaatggatacagaaaatgtggtacatttacaca atggtgtactactcgggtattaaaaacaatgaatttatgaaattcttagg caaatggatggatctggaggatatcatcctgagtgaagtaacccaatcac aaaagaacacacatgatatgcactcactgataagtggatattattccaga aacttagaacacccaagatacaatttgcaaaacacatgaaactcaagaag aaggaagaccaaagtgtggatactttgttccttcttagaatggggaacaa aatacccatggaaggagttgcaaagacaaagttcaaagctgagcctgaag gaacgaccatccagagactgccctatttggggatccaccccataaacaac caccaaacccaatcactagataaatgccaacaagagcctgctgataggaa cctgatatagctgtctcctatgaggctctgccagtgcctggcaaatacag aagtggatgctcacagtcatccattgaatggagcacaatgtccccagtga aggagcagagaaatacccagggagctaaaaggtctgaagcccataggagg accatcaatacgaactaccagtattcccggggtccttggaactatacaca atcaagaaaacacatggtggaactgtggctcttagcttatatatgtagca aaggatgcctagttggtcatcattggagcaaagcctgtcctggaagctct atgcctagattaggaatgcaagacaagaatggggatggggtgttgtaga	gaattcaatttccacaaccaaggtgaaaaagctggtgttctacactgagt tgagaggcaggtgtattttgtggttcattggccagctaatccatcctatt tggcttcaggtcaagataaaccttgtctcaaaaataagttggatgaggct agagagatggctctgtggtcaagagctttgggtacattttagaaggccag gattcaatttccaaaacatagccattcacaaccatttgtaactccggttc cagaagatccaaaacatttgtatggtctccattggtgtaaggcacacaca tggtgtgcacacacatacatgtgggcaaaatacagaaaaagtaaaagaaa aaatttaaattgtaataaaaatgcagatggcatttgaagaatgataccaa agattgacctttagcttccacgagcatgtgcatctacatttacacattcc gacatgaactgaacacacatccacaagcacaaacacacacacatgacatc aataatcttactgagaacaacaaaataaattccaagggaaataaaaccac attgtctttatgcaagatgcttgtggaaaaaaattttccttgcaaattaa caacaataaatctctaacaagactgacagagcttaaaaagaaaattagga ataaaaagcaattataactaaattactacagaaatttagaaataagtgaa agaggccccagaggcccccaaataacacaagcaattgatattgttctttc tttcccaccataattaaatgctgaagataccacatactttaggtacagga gaaataaaactggaactagcctgaaacttctttccttctggtgagctttc acaatgctcataatgtgtcatgtaggctgttagggtagatagggttataa aatggtattaccgagcaatgatccgtgaatgctataaatactggggctgg cagtcagatgtgcccactgttacaatagtgacataaaagttatgagagta accaatgactggacttgagtcttctctataggagattaaattcatgatgg tactttcacttgatcaaactactactatatttggcttaggtatgtgttgt tcaattgtaacactaatgtcattggcatttttgtgatgc
quality values	Open. Hide. 61 61 21 36 61 61 61 43 24 61 61 61 61 61 61 61 61 30 38 61 61 49 49 55 55 61 61 31 38 24 20 21 12 21 23 37 36 43 59 61 61 55 59 61 61 61 61 61 55 59 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 39 45 43 23 24 37 30 44 59 59 59 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 42 37 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 57 57 57 57 57 57 57 57 57 57 47 47 53 47 57 53 53 53 47 33 32 50 57 57 53 53 57 53 53 47 57 57 46 47 47 57 53 47 53 53 53 45 53 53 43 53 53 57 57 57 53 42 47 57 57 53 50 57 53 57 57 57 57 57 53 57 43 27 57 53 57 57 50 57 52 32 57 53 57 50 52 23 47 29 47 47 53 53 57 45 53 57 52 39 52 46 53 53 57 53 52 47 47 43 32 38 42 52 53 38 42 57 42 42 53 57 57 53 53 53 30 33 57 57 33 34 34 25 35 38 37 46 38 57 52 50 17 57 52 33 52 41 31 38 39 46 34 47 50 30 31 53 53 37 44 40 35 30 57 52 33 40 53 40 53 17 39 44 40 40 43 41 29 53 53 8 8 35 42 36 52 30 48 37 53 27 41 48 29 31 33 40 43 14 53 40 40 32 20 57 36 37 57 57 40 33 30 29 45 27 27 39 44 35 27 38 21 46 23 32 20 32 29 45 28 22 31 18 47 29 21 45 25 12 45 31 31 27 26 24 24 25 29 27 27 51 34 30 37 25 24 13 30 29 25 48 28 36 28 29 32 29 44 28 29 28 37 26 37 28 29 39 35 10 21 29 29 29 27 32 38 25 20 30 33 29 30 34 35 24 29 28 29 29 25 34 15 29 11 29 28 38 26 12 37 20 25 29 29 15 22 29 27 23 14 27 51 29 26 21 30 20 33 39 39 28 29 36 24 29 23 28 25 38 31 22 28 21 30 28 33 21 33 27 26 23 36 26 29 30 25 28 26 21 39 28 19 11 15 9 8 4 8 25 35 29 24 27 28 33 26 34 25 31 20 25 35 17 31 10 12 40 12 23 51 19 23 23 24 21 26 20 19 51 20 16 12 25 33 20 44 44 6 10 11 19 29 34 19 21 32 23 28 28 26 16 33 20 23 15 32 17 20 28 19 20 23 35 28 33 19 33 26 23 12 29 27 25 21 33 7 15 27 22 15 18 18 26 30 25 11 11 30 44 22 9 14 17 15 31 16 29 17 20 10 9 13 27 16 28 10 6 3 8 29 7 21 15 9 16 37 42 30 9 11 12 14 26 30 29 13 21 27 13 21 12 20 6 3 7 17 4 5 9 8 19 26 22 20 8 10 5 4 5 10 11 20 19 12 17 15 24 14 14 19 6 6 9 5 19 4 10 19 24 5 13 7 16 13 7 19 5 3 3 13 5 7 16 4 5 4 15 10 9 9 4 4 3 7 4 3 6 6 9 5 2 3 5 15 4 4 5 9 7 20 6 3 18 12 11 4 4 13 6 7 10 10 3 5 7 13 20 6 6 9 4 4 5 8 6 3 11 10 16 10 4 4 7 3 8 2 3 3 3 14 6 12 8 4 7 4 2	Open. Hide. 55 59 49 59 61 11 14 14 12 23 23 13 12 12 19 23 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 52 52 30 36 28 36 28 55 36 59 59 61 59 59 59 59 61 61 61 59 55 59 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 59 59 61 61 61 61 61 59 55 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 53 61 47 61 61 61 61 57 53 57 53 57 57 57 47 57 57 57 43 57 57 57 57 57 57 57 57 53 52 57 57 50 53 53 57 53 43 57 53 45 47 53 53 57 57 53 57 57 57 53 53 53 53 45 57 53 57 38 57 57 57 45 53 53 57 40 53 57 53 52 57 57 57 57 36 52 57 57 39 43 57 53 41 53 57 39 38 38 57 57 57 53 45 50 42 52 50 57 50 53 50 57 53 52 53 57 37 57 53 42 53 50 38 52 30 45 46 41 43 53 57 57 50 38 57 57 50 43 30 57 50 53 57 46 57 52 43 52 20 53 26 33 20 41 35 33 28 10 34 14 57 57 57 35 17 57 53 38 38 52 50 37 42 48 52 38 40 33 34 30 53 52 40 27 42 38 29 44 37 36 48 37 57 37 52 18 57 17 28 57 32 33 21 33 28 33 36 33 35 53 36 57 41 37 41 28 48 37 30 57 37 40 24 24 37 41 30 37 30 40 40 47 47 57 53 37 14 44 29 33 41 28 28 57 37 22 53 57 44 30 34 51 46 30 30 31 44 31 31 29 32 30 30 27 30 47 29 31 46 46 46 29 30 39 41 32 46 14 14 36 25 29 37 28 28 33 18 24 29 23 35 32 51 32 18 19 33 28 31 19 37 29 35 29 24 33 20 51 29 43 16 31 20 25 29 29 36 19 20 10 22 32 30 37 21 16 34 28 51 33 15 29 21 35 18 9 5 39 34 25 25 28 21 8 46 51 22 24 26 33 10 25 22 29 16 23 33 22 43 22 29 25 26 28 35 27 28 18 28 19 17 21 30 9 9 22 23 14 15 8 5 36 6 8 14 16 23 19 42 42 17 25 21 23 32 17 33 20 12 9 20 7 29 21 28 21 26 30 51 28 19 25 19 16 13 13 12 9 5 13 6 9 11 23 28 17 26 7 28 34 51 51 31 19 29 9 20 13 20 33 11 17 9 29 26 27 21 21 15 13 9 22 22 22 26 26 12 6 15 14 18 28 10 17 4 11 20 15 26 17 25 20 6 8 10 21 8 19 6 16 9 24 9 34 8 23 17 15 17 17 11 3 6 17 27 9 18 5 4 4 5 4 3 3 4 14 15 17 22 21 17 42 14 15 11 12 14 4 6 15 5 7 16 3 10 27 26 5 17 24 14 5 17 5 13 5 5 9 11 11 9 18 10 14 7 8 24 11 5 4 3 8 5 19 16 12 4 6 21 4 7 9 4 3 9 10 9 18 5 8 8 4 2 2 2 3 10 16 5 4 5 3 3 4

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_17217356_17218501
seq2: B6Ng01-147K03.g_69_1207 (reverse)

seq1  GCATCACAAATATATGCAAATGAACATAAGTGTTTACAAATTGACAACAC  50
      |||||||||  | |||| |||| |||| |||| |||||| |  |||||||
seq2  GCATCACAA--AAATGCCAATG-ACATTAGTG-TTACAATTGAACAACAC  46

seq1  ATACCTTTAGCAAAATAATAGTAGTAGTTTTGATCAAGTTTATAGTACCA  100
      ||||| | ||| |||| |||||||||| |||||||||| | | |||||||
seq2  ATACC-TAAGCCAAAT-ATAGTAGTAG-TTTGATCAAG-TGAAAGTACCA  92

seq1  TCCATGAA-TTAATCTCCTATAGAGAAGACCTCAAGTCCAGTCATTGGTT  149
      | |||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  T-CATGAATTTAATCTCCTATAGAGAAGA-CTCAAGTCCAGTCATTGGTT  140

seq1  ACTCTCATAACTTTTATGTCACTATTGTAACAGTGGGCACATCTTGACTG  199
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTCTCATAACTTTTATGTCACTATTGTAACAGTGGGCACATC-TGACTG  189

seq1  CCAG-CCCAGTA-TTATAGCATTCACGGATCATTGCTCGGTAATACCA-T  246
      |||| ||||||| ||||||||||||||||||||||||||||||||||| |
seq2  CCAGCCCCAGTATTTATAGCATTCACGGATCATTGCTCGGTAATACCATT  239

seq1  TTATAA-CCTATCTACCCTAACAGCCTACATGACACATTATGAGCATTGT  295
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACCCTATCTACCCTAACAGCCTACATGACACATTATGAGCATTGT  289

seq1  GAAAGCTCACCAGAAGGAAAGAAGTTTTCAGGCTAGTTCCAGTTTTATTT  345
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAAGCTCACCAGAAGGAAAGAAG-TTTCAGGCTAGTTCCAGTTTTATTT  338

seq1  CTCCTGTACCTAAAGTATGTGGTATCTTCAGCATTTAATTATGGTGGGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTACCTAAAGTATGTGGTATCTTCAGCATTTAATTATGGTGGGAA  388

seq1  AGAAAGAACAATATCAATTGCTTGTGTTATTTGGGGGCCTCTGGGGCCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAACAATATCAATTGCTTGTGTTATTTGGGGGCCTCTGGGGCCTC  438

seq1  TTTCACTTATTTCTAAATTTCTGTAGTAATTTAGTTATAATTGCTTTTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTATTTCTAAATTTCTGTAGTAATTTAGTTATAATTGCTTTTTA  488

seq1  TTCCTAATTTTCTTTTTAAGCTCTGTCAGTCTTGTTAGAGATTTATTGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATTTTCTTTTTAAGCTCTGTCAGTCTTGTTAGAGATTTATTGTT  538

seq1  GTTAATTTGCAAGGAAAATTTTTTTCCACAAGCATCTTGCATAAAGACAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTGCAAGGAAAATTTTTTTCCACAAGCATCTTGCATAAAGACAA  588

seq1  TGTGGTTTTATTTCCCTTGGAATTTATTTTGTTGTTCTCAGTAAGATTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTTATTTCCCTTGGAATTTATTTTGTTGTTCTCAGTAAGATTAT  638

seq1  TGATGTCATGTGTGTGTGTTTGTGCTTGTGGATGTGTGTTCAGTTCATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCATGTGTGTGTGTTTGTGCTTGTGGATGTGTGTTCAGTTCATGT  688

seq1  CGGAATGTGTAAATGTAGATGCACATGCTCGTGGAAGCTAAAGGTCAATC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATGTGTAAATGTAGATGCACATGCTCGTGGAAGCTAAAGGTCAATC  738

seq1  TTTGGTATCATTCTTCAAATGCCATCTGCATTTTTATTACAATTTAAATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATCATTCTTCAAATGCCATCTGCATTTTTATTACAATTTAAATT  788

seq1  TTTTCTTTTACTTTTTCTGTATTTTGCCCACATGTATGTGTGTGCACACC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTACTTTTTCTGTATTTTGCCCACATGTATGTGTGTGCACACC  838

seq1  ATGTGTGTGCCTTACACCAATGGAGACCATACAAATGTTTTGGATCTTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGCCTTACACCAATGGAGACCATACAAATGTTTTGGATCTTCT  888

seq1  GGAACCGGAGTTACAAATGGTTGTGAATGGCTATGTTTTGGAAATTGAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCGGAGTTACAAATGGTTGTGAATGGCTATGTTTTGGAAATTGAAT  938

seq1  CCTGGCCTTCTAAAATGTACCCAAAGCTCTTGACCACAGAGCCATCTCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCTTCTAAAATGTACCCAAAGCTCTTGACCACAGAGCCATCTCTC  988

seq1  TAGCCTCATCCAACTTATTTTTGAGACAAGGTTTATCTTGACCTGAAGCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCATCCAACTTATTTTTGAGACAAGGTTTATCTTGACCTGAAGCC  1038

seq1  AAATAGGATGGATTAGCTGGCCAATGAACCACAAAATACACCTGCCTCTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGATGGATTAGCTGGCCAATGAACCACAAAATACACCTGCCTCTC  1088

seq1  AACTCAGTGTAGAACACCAGCTTTTTCACCTTGGTTGTGGAAATTGAATT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTGTAGAACACCAGCTTTTTCACCTTGGTTGTGGAAATTGAATT  1138

seq1  C  1146
      |
seq2  C  1139

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information