BAC Information

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BAC

Clone NameB6Ng01-151M16
ChromosomeX (Build37)
Map Location 162,599,836 - 162,732,544
singlet/doubletdoublet
Overlap geneGemin8, Gpm6b
Upstream geneGlra2, LOC100040753
Downstream geneOfd1, Trappc2, Rab9, LOC100040795, A630018P17Rik, Egfl6, LOC100041912, LOC641660, LOC667791, EG667794, LOC100040850, LOC627268, Tmsb4x, Tlr8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151M16.bB6Ng01-151M16.g
ACCDH947523DH947524
length1,1731,161
definitionDH947523|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M16, 5' end.DH947524|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(162,599,836 - 162,600,740)(162,731,371 - 162,732,544)
sequence
gaattcatgaaattcttggacaaatggatgtatctggaagatagcatcct
tagtggggtaaccctatcacaaaagaagtcattagctatgcactcactga
taagtggatattagcccagaaacatagaacacccaagatacaatttgcaa
aacacaagaaaatcaaaaagagggaagaccaatgggtggatacttcattc
ctccttagaatagggaacaaaatacccatgaaaggagttacagagacaaa
gtttggagctaagacaaaaggatggactatccagaactaccccacctggg
gatccatcccataatcagccaccaaacccagacactattgcgtgtgccag
aaagattttgctgaagggaccctgttatagctgtctcgtatgaggctatt
ccagtgcctggcaaatacagaagtggatgctcacagtcatctataagatg
gaacacagggcccccaatagagaagctagaaaaagcacccaaggagctta
aggtatctgcaaccctataggtggaacaacaatatgaactaaccagtacc
cccagagctcggatctctagctgcatatgtatcagaagatggcctagtca
gccattactgggaagagagaccccttggtattgcaaactttatatgcccc
agtacaggggaatgccagggccaggaagtgggagtgcgtgggtaggggag
cagggcggagggagggtatagggaactttcaggatagcatttgaaatgca
tataaagaaaatatctaataaaaaataaaaaatttttaaaaaagaaaata
gaagttctgagaaggatgtaatccagagaattcaaagacaaacctagacc
agttcatctattacacaaggcaagttcaagatatataatatccatgccaa
gaaaaatctaacagtgaggaaggatggctgttaagctgatcttttcttaa
tctctatggcatcttagatactgtgcagtacatggagatgggctttacct
atgtctttgtaaagcatcttgtgggacagaaagcatactgtgtaggaaac
ttctctacaagacccttacttgttctgaggctcgacaatggccatggaaa
ttatctggctagagaaataatttgcaccattctcacgctgtttgagagtg
taatacatgaaactggatggaaa
gaattctgtactgtttttaaatatagggaactatttttaagggtcttcca
agtggtacagaaaattcctaaagctagggtctgtagatttttaccttatc
tttgttcactgccattaagatatttggggactggagttgaagagatagct
ctgtcagtaaagtgtctgtcatgccggcacatttgacccctagaaccaat
ataaaaggctgggtacctgggcaagtggagacttgctggaaagacagtat
agtcaagtaggtgagctcgaggttcagtgagagaccctgtctcagaaaat
aaggtggaaattgactgaggaagatatcggttatcagtctctaggtacat
gggggtacacctgtacacgtgtacacgtgcacatacacacacagagaaga
tctggaaaacacagtataagaaatagcgtctctatattgtcacatttttc
ctcctcagagctataaactttaatataccatattaggaagtagttttctc
catagatgttagataactgaagctacacttgaccaaagactctaaatcag
aaatatgtaaatcggtgagaaggaaatatacgttgtctaacctgaatagt
gttcaaaatatgaaaggatacaagtgggagaaaggcttatgtgccatgat
tcaggaaaacattaggtctgccctgaaatttattagaaaaggaaatggag
aaaagcagggggcggcaggaagcaacatctgtagagaatgaaaacatagt
ttgtcatctcacgtaaggagacattgagtaattggtttgcaaaggaactt
agttctccagctttgagtttccaaacagggtattcagaagcctatttgta
ccacttaaaaacatttaaaatgatgtgtacatgtgcatgtgggtgggagt
gtaggctttgcacacaggaatgcagtcagtgcatatgagtgcagtgcctg
gaagccagagagggtatcagattcccgcaacttgagatacaggcagtgtg
accaactggtctggatgctgagaatcaataggcctcattaaaaatgtgta
attggaggtaattattgtatgtaaccacatgtgtactggtaaccagaaat
cctagaaagagatgtcggacccccccttctgggcctgagattacaggtgg
tgtgagccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_162599836_162600740
seq2: B6Ng01-151M16.b_320_1217

seq1  ACTATCCAGAACTACCCCACCTGGGGATCCATCCCATAATCAGCCACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCAGAACTACCCCACCTGGGGATCCATCCCATAATCAGCCACCAA  50

seq1  ACCCAGACACTATTGCGTGTGCCAGAAAGATTTTGCTGAAGGGACCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACACTATTGCGTGTGCCAGAAAGATTTTGCTGAAGGGACCCTGT  100

seq1  TATAGCTGTCTCGTATGAGGCTATTCCAGTGCCTGGCAAATACAGAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTGTCTCGTATGAGGCTATTCCAGTGCCTGGCAAATACAGAAGTG  150

seq1  GATGCTCACAGTCATCTATAAGATGGAACACAGGGCCCCCAATAGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCACAGTCATCTATAAGATGGAACACAGGGCCCCCAATAGAGAAG  200

seq1  CTAGAAAAAGCACCCAAGGAGCTTAAGGTATCTGCAACCCTATAGGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAAGCACCCAAGGAGCTTAAGGTATCTGCAACCCTATAGGTGGA  250

seq1  ACAACAATATGAACTAACCAGTACCCCCAGAGCTCGGATCTCTAGCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATATGAACTAACCAGTACCCCCAGAGCTCGGATCTCTAGCTGCA  300

seq1  TATGTATCAGAAGATGGCCTAGTCAGCCATTACTGGGAAGAGAGACCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCAGAAGATGGCCTAGTCAGCCATTACTGGGAAGAGAGACCCCT  350

seq1  TGGTATTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAGG  400

seq1  AAGTGGGAGTGCGTGGGTAGGGGAGCAGGGCGGAGGGAGGGTATAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGTGCGTGGGTAGGGGAGCAGGGCGGAGGGAGGGTATAGGGAA  450

seq1  CTTTCAGGATAGCATTTGAAATGCATATAAAGAAAATATCTAATAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGATAGCATTTGAAATGCATATAAAGAAAATATCTAATAAAAAA  500

seq1  TAAAAAATTTTTAAAAAAGAAAATAGAAGTTCTGAGAAGGATGTAATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTTTTAAAAAAGAAAATAGAAGTTCTGAGAAGGATGTAATCCA  550

seq1  GAGAATTCAAAGACAAACCTAGACCAGTTCATCTATTACACAAGGCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCAAAGACAAACCTAGACCAGTTCATCTATTACACAAGGCAAGT  600

seq1  TCAAGATATATAATATCCATGCCAAGAAAAATCTAACAGTGAGGAAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATATATAATATCCATGCCAAGAAAAATCTAACAGTGAGGAAGGAT  650

seq1  GGCTGTTAAGCTGATCTTTTCTTAATCTCTATGGCATCTTAGATACTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTAAGCTGATCTTTTCTTAATCTCTATGGCATCTTAGATACTGTG  700

seq1  CAGTACATGGAGATGGGCTTTACCTATGTCTTTGTAAAGCATCTTGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGTACATGGAGATGGGCTTTACCTATGTCTTTGTAAAGCATCTTGT-GG  749

seq1  GACAGAAAGCATACTGTGTAGGAAACTTCTCTACAAGACCCTTACTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAAGCATACTGTGTAGGAAACTTCTCTACAAGACCCTTACTTGTT  799

seq1  CTGAGGCTCAAACAATGGCCAATGGAAATTATCT-GCTAGAG-AATAATT  848
      |||||||||  ||||||||| ||||||||||||| ||||||| |||||||
seq2  CTGAGGCTC-GACAATGGCC-ATGGAAATTATCTGGCTAGAGAAATAATT  847

seq1  TGCACCCAATTCTCACGCTGTTGAAGA-TGTAATAACATGAAAAACTGGA  897
      ||||||  ||||||||||||||  ||| |||||| |||||  ||||||||
seq2  TGCACC--ATTCTCACGCTGTTTGAGAGTGTAAT-ACATG--AAACTGGA  892

seq1  GTTGGAAA  905
        ||||||
seq2  --TGGAAA  898

seq1: chrX_162731371_162732544
seq2: B6Ng01-151M16.g_69_1229 (reverse)

seq1  TGTGGCTCACAACCACCTGTAATTCTAGCCCCAGAAGGGGGTGTCCGACA  50
      |||||||||| ||||||||||||   || |||||||||||| ||||||||
seq2  TGTGGCTCAC-ACCACCTGTAATCTCAGGCCCAGAAGGGGGGGTCCGACA  49

seq1  CTCT-TTTCTA-GATTTCTTGGTTACATGTACACATGTGGTATACATACA  98
       ||| |||||| |||||| |||||||  ||||||||||||| ||||||||
seq2  -TCTCTTTCTAGGATTTC-TGGTTACCAGTACACATGTGGT-TACATACA  96

seq1  TAATTTACCTCCATATACACATTTTTTTAATGAGGCCTATTTGATTCTCA  148
        | |||||||||  ||||||  |||||||||||||||| ||||||||||
seq2  ATAATTACCTCCAATTACACA--TTTTTAATGAGGCCTA-TTGATTCTCA  143

seq1  GCATCCAGACCAGTTGGGTCACAACTGCCTGTATCTCAAGTTGCGGGGAA  198
      ||||||||||||||| |||||| ||||||||||||||||||||| |||||
seq2  GCATCCAGACCAGTT-GGTCAC-ACTGCCTGTATCTCAAGTTGC-GGGAA  190

seq1  TCTGATACCCTCTTCTGGCCTTCCCAGGCACTGCACTCATATGCACTGAC  248
      |||||||||||| ||||||  | |||||||||||||||||||||||||||
seq2  TCTGATACCCTC-TCTGGC--TTCCAGGCACTGCACTCATATGCACTGAC  237

seq1  TGCATTCCTGTGTGCAAAGCCTACACTCCCACCCACATGCACATGTACAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCCTGTGTGCAAAGCCTACACTCCCACCCACATGCACATGTACAC  287

seq1  ATCATTTTTAAATGTTTTTAAGTGGTACAAATAGGCTTCTGAATACCCTG  348
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCA-TTTTAAATGTTTTTAAGTGGTACAAATAGGCTTCTGAATACCCTG  336

seq1  TTTTGGAAACTCAAAGCTGGAGAACTAAGTTCCTTTGCAAACCAATTACT  398
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTGGAAACTCAAAGCTGGAGAACTAAGTTCCTTTGCAAACCAATTACT  385

seq1  CAATGTCTCCTTACGTGAGATGACAAACTATGTTTTCATTCTCTACAGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTCCTTACGTGAGATGACAAACTATGTTTTCATTCTCTACAGAT  435

seq1  GTTGCTTCCTGCCGCCCCCTGCTTTTCTCCATTTCCTTTTCTAATAAATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTCCTGCCGCCCCCTGCTTTTCTCCATTTCCTTTTCTAATAAATT  485

seq1  TCAGGGCAGACCTAATGTTTTCCTGAATCATGGCACATAAGCCTTTCTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCAGACCTAATGTTTTCCTGAATCATGGCACATAAGCCTTTCTCC  535

seq1  CACTTGTATCCTTTCATATTTTGAACACTATTCAGGTTAGACAACGTATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTATCCTTTCATATTTTGAACACTATTCAGGTTAGACAACGTATA  585

seq1  TTTCCTTCTCACCGATTTACATATTTCTGATTTAGAGTCTTTGGTCAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCTCACCGATTTACATATTTCTGATTTAGAGTCTTTGGTCAAGT  635

seq1  GTAGCTTCAGTTATCTAACATCTATGGAGAAAACTACTTCCTAATATGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTCAGTTATCTAACATCTATGGAGAAAACTACTTCCTAATATGGT  685

seq1  ATATTAAAGTTTATAGCTCTGAGGAGGAAAAATGTGACAATATAGAGACG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAGTTTATAGCTCTGAGGAGGAAAAATGTGACAATATAGAGACG  735

seq1  CTATTTCTTATACTGTGTTTTCCAGATCTTCTCTGTGTGTGTATGTGCAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTTATACTGTGTTTTCCAGATCTTCTCTGTGTGTGTATGTGCAC  785

seq1  GTGTACACGTGTACAGGTGTACCCCCATGTACCTAGAGACTGATAACCGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACACGTGTACAGGTGTACCCCCATGTACCTAGAGACTGATAACCGA  835

seq1  TATCTTCCTCAGTCAATTTCCACCTTATTTTCTGAGACAGGGTCTCTCAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCTCAGTCAATTTCCACCTTATTTTCTGAGACAGGGTCTCTCAC  885

seq1  TGAACCTCGAGCTCACCTACTTGACTATACTGTCTTTCCAGCAAGTCTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTCGAGCTCACCTACTTGACTATACTGTCTTTCCAGCAAGTCTCC  935

seq1  ACTTGCCCAGGTACCCAGCCTTTTATATTGGTTCTAGGGGTCAAATGTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCCAGGTACCCAGCCTTTTATATTGGTTCTAGGGGTCAAATGTGC  985

seq1  CGGCATGACAGACACTTTACTGACAGAGCTATCTCTTCAACTCCAGTCCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCATGACAGACACTTTACTGACAGAGCTATCTCTTCAACTCCAGTCCC  1035

seq1  CAAATATCTTAATGGCAGTGAACAAAGATAAGGTAAAAATCTACAGACCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATCTTAATGGCAGTGAACAAAGATAAGGTAAAAATCTACAGACCC  1085

seq1  TAGCTTTAGGAATTTTCTGTACCACTTGGAAGACCCTTAAAAATAGTTCC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTAGGAATTTTCTGTACCACTTGGAAGACCCTTAAAAATAGTTCC  1135

seq1  CTATATTTAAAAACAGTACAGAATTC  1174
      ||||||||||||||||||||||||||
seq2  CTATATTTAAAAACAGTACAGAATTC  1161