MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-152O05
Chromosome	X (Build37)
Map Location	84,990,807 - 84,991,915
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Il1rapl1, LOC667876
Downstream gene	EG667883, LOC667891, EG245506
Link	Open Mouse BAC browser

Click to get alignment info.

name	Il1rapl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331461 MGI:2687319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC667876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG667883 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667883 MGI:3648007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667891 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 79 ESTs, 25 Proteins pseudo : _no_value

name	EG245506 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245506 MGI:3646205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Il1rapl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407621 GeneID:331461 MGI:2687319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : interleukin 1 receptor accessory protein-like 1, transcript variant 1 transcript_id : XM_486726.4

name	EG245506 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407625 GeneID:245506 MGI:3646205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG245506 transcript_id : XM_111973.7

name	Il1rapl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407622 GeneID:331461 MGI:2687319
definition	codon_start : 1 product : similar to interleukin 1 receptor accessory protein-like 1 isoform 1 protein_id : XP_486726.4

name	EG245506 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407626 GeneID:245506 MGI:3646205
definition	codon_start : 1 product : similar to Novel DUF625 domain containing protein protein_id : XP_111973.7

name	LOC667876 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667876
definition	number : 1 pseudo : _no_value

name	EG667883 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667883
definition	number : 1 pseudo : _no_value

name	EG667883 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667883
definition	number : 2 pseudo : _no_value

name	LOC667891 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271801 GeneID:667891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 79 ESTs, 25 Proteins product : similar to glyceraldehyde-3-phosphate-dehydrogenase pseudo : _no_value transcript_id : XR_033570.1

clone name	MSMg01-456E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-481B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253K22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-152O05.b	B6Ng01-152O05.g
ACC	DH948351	DH948352
length	1,166	1,092
definition	DH948351\|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O05, 5' end.	DH948352\|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O05, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctagaaattctttaatttatttcttcatttctttccttattcaga gttccttgtgtagagagttattcagtttccataggtgaagcttgttttgt ggctgattatatggtcaattttggataaggttccctgagatgctgagaag aaggtatattcttttgtgtttgagtgaaatattctatagatatctgttag gtccatttgaatcatgacttctgttagtttagttatcttgctctgtagtt tctattatgattatctgttctttggtgagagtgggatgatgaagtctcct actattaataggcaaggttcaatgtggggtttaagttttagtaatgttgt tgctcttgccttttgggcatcaatgttcagaattgagaattattcttggt ggatttttccttttatgagtatgaagtgtccccttctcctgtgattactt ttggttgaatgtgtatttattaaatattagaatggctactctagcttgtt tcttgggggtgcttgcttgtaaaactttttttccagtcctttactctgag gtaattctatcatttttatttcttgtatacagtagagtaatggattctgt ttatgtatccattctgttagcatgtgtctttttattggggaactgaatcc attgatgttgagagttattgattaccaaaaattggtaattcttgttattt tgatgttggttgtttgaatatgcttggtgcagtgatactgttaggtgctg tggccttgttggagtaggtgtggccttattggaggaagtgtgtcactgtc agggtgggctttgatgctcttatactgtgctctgtgcagaagtgagtctg cttctggttgccctcagttcaagatatagattctcatttccttttccagc actatgtctgcctggacaatgctgtgcttcctgccatgatgataatgaac tgacctctgaatctttaaggcagcctcaaataatgttgtttttaagaagt gcttgtcatgtgtctttttataacacatggaaactctaactaaagccgaa gatgaaatacggatctggggaatttttggaaagcctgtaatagttgtgtt gagaactcggttttggaaattaatactcgttgattattagtaggagagtg ccaactcacgaacacc	gaattcaacatactcagaaaggactggaagagagttaacactcctttaac aatcttcatttccccaaggaagtcaaaatataatcaaagggatatttttt acaaaaagatttataacacatgtgggccaactgcgtcattatttgtctac aatggcagataatagcattttgtacttctagaaattacctctgatattgt tacatttcaagagtttttatatgacaagatcatattccaaacagttcata tgaagtgagacacttgtgaagagaaaaacaaaaagacagcaatcatgatt atgcttttattgataaatcatttttacttactccggttaaaaaaaaatca attcaactgaatttcaagacgttttggctaaatgctactcaatatttttc tcatgaatatatgttagttttctgttattactaaacctcaaaataattta ctgtttctcattttacttttatgagaacagtaatttgaaacccacataaa atgaacattccaacctgcttcatactgtcagtataactaaggaaaggtaa tatgaggtacttataggactgtaattttcttcatgttcagtgagcatatt tatcttttattgttttctctgtattcacatattaacagtaaagggtactc tatttgcgaagtgtgttgcctctgttgtgctactgtaaatggtttgaatt tggaagacaagacaaaatacaacctaagcatatagctaaatctcagatca tttagtagatttctttctgcagtgccactaccatataatcccgtgacaaa attcaagcattaacttctttacattacgatgcttttaaacataccaaggg tatctgaagccagatacattgatgaaaagatgtgatgttgatattgtcac gggatcaaaagactgtagctaataaattttgaatagtatttttgatttct gtacaataaatgtagaaggtcatgcatatttgaatctgtgaagaatagtg aatttttttattagccccagacattttgtgaggtgctacatatgtgataa aatccattgtcctgactgagatgatgcacactatatactaag
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Alignment Information

BAC End 1

BAC End 2

seq1: chrX_84990807_84991915
seq2: B6Ng01-152O05.g_68_1159

seq1  GAATTCAACATACTCAGAAAGGACTGGAAGAGAGTTAACACTCCTTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATACTCAGAAAGGACTGGAAGAGAGTTAACACTCCTTTAAC  50

seq1  AATCTTCATTTCCCCAAGGAAGTCAAAATATAATCAAAGGGATATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCATTTCCCCAAGGAAGTCAAAATATAATCAAAGGGATATTTTTT  100

seq1  ACAAAAAGATTTATAACACATGTGGGCCAACTGCGTCATTATTTGTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGATTTATAACACATGTGGGCCAACTGCGTCATTATTTGTCTAC  150

seq1  AATGGCAGATAATAGCATTTTGTACTTCTAGAAATTACCTCTGATATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGATAATAGCATTTTGTACTTCTAGAAATTACCTCTGATATTGT  200

seq1  TACATTTCAAGAGTTTTTATATGACAAGATCATATTCCAAACAGTTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCAAGAGTTTTTATATGACAAGATCATATTCCAAACAGTTCATA  250

seq1  TGAAGTGAGACACTTGTGAAGAGAAAAACAAAAAGACAGCAATCATGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGAGACACTTGTGAAGAGAAAAACAAAAAGACAGCAATCATGATT  300

seq1  ATGCTTTTATTGATAAATCATTTTTACTTACTCCGGTTAAAAAAAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTATTGATAAATCATTTTTACTTACTCCGGTTAAAAAAAAATCA  350

seq1  ATTCAACTGAATTTCAAGACGTTTTGGCTAAATGCTACTCAATATTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTGAATTTCAAGACGTTTTGGCTAAATGCTACTCAATATTTTTC  400

seq1  TCATGAATATATGTTAGTTTTCTGTTATTACTAAACCTCAAAATAATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAATATATGTTAGTTTTCTGTTATTACTAAACCTCAAAATAATTTA  450

seq1  CTGTTTCTCATTTTACTTTTATGAGAACAGTAATTTGAAACCCACATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTCATTTTACTTTTATGAGAACAGTAATTTGAAACCCACATAAA  500

seq1  ATGAACATTCCAACCTGCTTCATACTGTCAGTATAACTAAGGAAAGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATTCCAACCTGCTTCATACTGTCAGTATAACTAAGGAAAGGTAA  550

seq1  TATGAGGTACTTATAGGACTGTAATTTTCTTCATGTTCAGTGAGCATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGTACTTATAGGACTGTAATTTTCTTCATGTTCAGTGAGCATATT  600

seq1  TATCTTTTATTGTTTTCTCTGTATTCACATATTAACAGTAAAGGGTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTATTGTTTTCTCTGTATTCACATATTAACAGTAAAGGGTACTC  650

seq1  TATTTGCGAAGTGTGTTGCCTCTGTTGTGCTACTGTAAATGGTTTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCGAAGTGTGTTGCCTCTGTTGTGCTACTGTAAATGGTTTGAATT  700

seq1  TGGAAGACAAGACAAAATACAACCTAAGCATATAGCTAAATCTCAGATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGACAAGACAAAATACAACCTAAGCATATAGCTAAATCTCAGATCA  750

seq1  TTTAGTAGATTTCTTTCTGCAGTGCCACTACCATATAATCCCGTGACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGATTTCTTTCTGCAGTGCCACTACCATATAATCCCGTGACAAA  800

seq1  ATTCAAGCATTAACTTCTTTACATTACGATGCTTTTAAACATACCAAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCATTAACTTCTTTACATTACGATGCTTTTAAACATACCAAGGG  850

seq1  TATCTGAAGCCAAGATACATTGATGAAAAGATGTGATGTTGATATTGTCA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAAGCC-AGATACATTGATGAAAAGATGTGATGTTGATATTGTCA  899

seq1  CGGGATCAAAAAGACTGTAGCTAATAAATTTTGAAATAGTATTTTTGATT  950
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  CGGGATC-AAAAGACTGTAGCTAATAAATTTTG-AATAGTATTTTTGATT  947

seq1  TCTGTTACAATAAAATGTAGAAGGGTCATGCATATTTGAATCTGTGAAGA  1000
      |||| |||||| |||||||||| |||||||||||||||||||||||||||
seq2  TCTG-TACAAT-AAATGTAGAA-GGTCATGCATATTTGAATCTGTGAAGA  994

seq1  ATAGTGAATTTTTTTA-TAGCCCCAGACATTTTTGTGAAGGTGCTAACCA  1049
      |||||||||||||||| |||||||||||| ||||||| ||||||||  ||
seq2  ATAGTGAATTTTTTTATTAGCCCCAGACA-TTTTGTG-AGGTGCTA--CA  1040

seq1  TAATGTTGATAAAAATCCA-TGTCCTGACTGAGATTGATGGCACACACTT  1098
      | ||| |||| |||||||| |||||||||||||| |||||   ||||| |
seq2  T-ATG-TGAT-AAAATCCATTGTCCTGACTGAGA-TGATG---CACAC-T  1082

seq1  ATAATACTAAG  1109
      || ||||||||
seq2  AT-ATACTAAG  1092

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information