BAC Information

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BAC

Clone NameB6Ng01-153B12
ChromosomeX (Build37)
Map Location 132,790,205 - 132,791,158
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621322, Pramel3, EG621352, EG331529, EG621380, EG666040, EG666045, AV320801, EG621467, Nxf7, 4930534P07Rik, 1700008I05Rik, 1700129I15Rik, Gprasp1, Gprasp2, Bhlhb9, LOC100041110, 2900062L11Rik, 6530401D17Rik, Bex2, Nxf3, Bex4, Tceal8, Tceal5, Bex1, LOC100040972, Wbp5
Downstream geneNgfrap1, LOC666180, LOC237048, LOC666196, Kir3dl2, LOC100041079, Kir3dl1, Tceal3, Tceal1, Morf4l2, BC065397, Glra4, LOC100041122, Plp1, Rab9b, 1700014N06Rik, LOC621984, LOC100034363, 4930488E11Rik, LOC666244, 2810402A17Rik, Zcchc18, BC031748, LOC666277, LOC436231, LOC666288, LOC100041260, LOC100041272, LOC669737, Esx1, EG666303
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153B12.bB6Ng01-153B12.g
ACCDH948501DH948502
length751946
definitionDH948501|Mus musculus domesticus DNA, BAC clone: B6Ng01-153B12, 5' end.DH948502|Mus musculus domesticus DNA, BAC clone: B6Ng01-153B12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctccgagccccatcttttaagggggttatttgatt
ttctggagtccaccatcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttccgaatctgttggtggcct
ttttatcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctattcaggaattttttccctgtgcccatatcttcgagacttttccccac
tttctcctttataagtttcagtgtctttggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagagaggaatgggtcgataagc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaatt
gctgtctttttccactggatggttttttttgttgttgttgttgtttttgt
tttgttttttttttttttagtttttatttatttatttttttttgagaatg
caaatacaaaggtaatttttttccattttttattaggtatttagctcatt
tacatttccaatgctataccaaaagtcccccatacccactcacccccact
ccctatccactcactcccctttttgggcctggggtcccccgatctggggg
atacaaatttgctttcccaaggggcttctcttcatgtggctgattaagca
t
gaattcactcaacaagcatgctgacttcagatgttatctgctagcattcc
caggtgtcttaccttaaaggcttagtggagactagatgtctactcagctt
actgataacattccaggagttttacctaatggcggggaggatgttaagac
agacgtgcaagctgaaaaatatatggccatttaagggacaaagataacca
agataatattgtccctttgacctacagcattccagcccttcacaatgagg
gcattcctgcattccagtcctttgacaaaaaccagtcagcgggactgttc
tagacacagcactgttgggaaactttgctctacattgctcatcctaggga
tccatatcttcaataaaataaaataaaataaaataaaataaaatagaata
agcagggaaccagcattctctgtgaggaggttggatgcacaaaggagtcc
ctaccttttggttgcactcactcagcattcaactttagtcaagggtcagc
agtgccaggctgagcaatgctgatatccttcccttcccaagcagagagtt
ccagatttgaggttacactgtgcttgttctcaattacttggcagaatgca
gtttttgacccccaaactcagctaggaattttggtggcctagatcaactg
ccacatatttctccccattttctaatttttttaagatttatttatttgtt
atatgcaagtacactgtagctgtcttcagacaccccagaagagggcaccg
gatctcaaaacatgtggttgctggaatttgaactcaggaccctcggaaga
gcagtcagtactcttaaccactgagccatctctccagccccctctcccca
tttttctataattgtgttgaatacaagattttggtgttgttaggttttgt
ttatttgttttttccaggacaggttctctgtgtagcctggctgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_132790205_132791158
seq2: B6Ng01-153B12.g_71_1015

seq1  GAATTCACTCAACAAGCATGCTGACTTCAGATGTTATCTGCTAGCATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAACAAGCATGCTGACTTCAGATGTTATCTGCTAGCATTCC  50

seq1  CAGGTGTCTTACCTTAAAGGCTTAGTGGAGACTAGATGTCTACTCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCTTACCTTAAAGGCTTAGTGGAGACTAGATGTCTACTCAGCTT  100

seq1  ACTGATAACATTCCAGGAGTTTTACCTAATGGCGGGGAGGATGTTAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAACATTCCAGGAGTTTTACCTAATGGCGGGGAGGATGTTAAGAC  150

seq1  AGACGTGCAAGCTGAAAAATATATGGCCATTTAAGGGACAAAGATAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTGCAAGCTGAAAAATATATGGCCATTTAAGGGACAAAGATAACCA  200

seq1  AGATAATATTGTCCCTTTGACCTACAGCATTCCAGCCCTTCACAATGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATATTGTCCCTTTGACCTACAGCATTCCAGCCCTTCACAATGAGG  250

seq1  GCATTCCTGCATTCCAGTCCTTTGACAAAAACCAGTCAGCGGGACTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTGCATTCCAGTCCTTTGACAAAAACCAGTCAGCGGGACTGTTC  300

seq1  TAGACACAGCACTGTTGGGAAACTTTGCTCTACATTGCTCATCCTAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACAGCACTGTTGGGAAACTTTGCTCTACATTGCTCATCCTAGGGA  350

seq1  TCCATATCTTCAATAAAATAAAATAAAATAAAATAAAATAAAATAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATCTTCAATAAAATAAAATAAAATAAAATAAAATAAAATAGAATA  400

seq1  AGCAGGGAACCAGCATTCTCTGTGAGGAGGTTGGATGCACAAAGGAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGAACCAGCATTCTCTGTGAGGAGGTTGGATGCACAAAGGAGTCC  450

seq1  CTACCTTTTGGTTGCACTCACTCAGCATTCAACTTTAGTCAAGGGTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTTTGGTTGCACTCACTCAGCATTCAACTTTAGTCAAGGGTCAGC  500

seq1  AGTGCCAGGCTGAGCAATGCTGATATCCTTCCCTTCCCAAGCAGAGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGGCTGAGCAATGCTGATATCCTTCCCTTCCCAAGCAGAGAGTT  550

seq1  CCAGATTTGAGGTTACACTGTGCTTGTTCTCAATTACTTGGCAGAATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTGAGGTTACACTGTGCTTGTTCTCAATTACTTGGCAGAATGCA  600

seq1  GTTTTTGACCCCCAAACTCAGCTAGGAATTTTGGTGGCCTAGATCAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGACCCCCAAACTCAGCTAGGAATTTTGGTGGCCTAGATCAACTG  650

seq1  CCACATATTTCTCCCCATTTTCTAA-TTTTTTAAGATTTATTTATTTGTT  699
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCACATATTTCTCCCCATTTTCTAATTTTTTTAAGATTTATTTATTTGTT  700

seq1  ATATGCAAGTACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAGTACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCG  750

seq1  GATCTCAAAACATGTGGTTGCTGGAATTTGAACTCAGGACCCTCGGAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCAAAACATGTGGTTGCTGGAATTTGAACTCAGGACCCTCGGAAGA  800

seq1  GCAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGCCCCCTCTCCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGCCCCCTCTCCCCA  850

seq1  TTTTTCTATAAATTGTGTTGAATACAAGATTTTGGTGTTGTTAGGTTTTT  899
      ||||||||| ||||||||||||||||||||||||||||||||||||||  
seq2  TTTTTCTAT-AATTGTGTTGAATACAAGATTTTGGTGTTGTTAGGTTT--  897

seq1  GTTTTTATTTTTGTTTTTTTCCAGGACAGGGTTTCTCTGTGTAGCCTTGG  949
       | |||||||    ||||||||||||||||  |||||||||||||| |||
seq2  -TGTTTATTT---GTTTTTTCCAGGACAGG--TTCTCTGTGTAGCC-TGG  940

seq1  CTGTC  954
      |||||
seq2  CTGTC  945