BAC Information

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BAC

Clone NameB6Ng01-153O13
Chromosome4 (Build37)X (Build37)
Map Location 99,421,746 - 99,421,961122,923,708 - 122,924,401
singlet/doubletsingletsinglet
Overlap geneAlg6
Upstream geneAnkrd38, LOC100039541, Usp1, Dock7, Angptl3, LOC665193, Atg4c, LOC665212, LOC638890, LOC100042589, Foxd3
Downstream geneItgb3bp, BC020077, Pgm2, Ror1, Ube2u, LOC277707, LOC621573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153O13.bB6Ng01-153O13.g
ACCDH949092DH949093
length954905
definitionDH949092|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O13, 5' end.DH949093|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(99,421,746 - 99,421,961)(122,923,708 - 122,924,401)
sequence
gaattcttgtttatttaatcattttttgctgatccttgtgtttatattag
taaatcactaggaacatattttaatttaatagacacattctgtttaataa
acaaaaattaaaaaccatatatgaatgtttagagatagaacagtatgagt
aggtgaagtatatttctttttcttttttcccatattttattatatatttt
cttcatttacatttcaaatgctatccggaaattcccccataccctcctgc
cccattaatccccaacccacccactactccctctttcctgacactagcat
tcccctgtactggggcatataatcttcccatgatcaagtgtctctcctcc
cattgatgaccaactaggccatcctctgctacatatgcaactaaagacac
aagctctggggggtacttgttagatcatattgttgttcctcctatagggc
tgcagaccgctttagcaactagggtaatttctctcacaccttcattgggg
gggctctggttccatacaatagatgactgtgagcatccacttctgtattt
gccaggcactggatagctatatcagggtcctgtaagcaaaacctcactgg
catatgcaatagtgtctggtttaggtggttgtttataggatggatgccca
ggtagggcagtctctggatggtcctaccttacctctcagcactgtaattt
gtctctgtaactccttccatgggtattttcttctccattctaagaaggaa
cgaagtatctacacattgttcttcctctttcttgagtttctagtgttttg
caaattatatcttggatagtctaagtatctgggctaatatccacttatag
tgagtatatatcatgtgtgttcttttatcattgggttacctcactcagat
gatatcctccagatcatccatttgcctaagaattcatgaattcatgtttt
aata
gaattcctgatctttccaagactttgatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttttttatataatggattacattgatggatttgcatattctatcct
gtttcactccgagaccaatctttgctggagagcatgtgggactcataagc
atcaaagcttcttggacaggatcccatcagttcttcatcctcagccagga
agtagagctgaccctcagaccactttgcaccttcccagacagaggagagc
ttgattagagcgagtgctctgacccctgggactcaggagagaattaaatg
cccaggattgctgacagagagtaacagatggaacaagctccatccagaga
tagctagaacatctaacaccaaagtttaccagatggttaaaggcaaacat
aagaaccagtactcccaacacagtgagccctggataccccaacagaccag
aaaagcaagattcagatttaaaatcatatcttatgatgcaggtagaggat
tttaagaaggacattaataactcacttaaaaaaatactggagaacactgc
taaacaggtaaatgtccttaaagaggaaacaaaaagtccattaaagaatt
acaaaaataaaaaataaaataaaacaaaaccaaaacactacaaaacatat
gtaagtccttaaagaagaaacataaaaatccctgaatgaattagaggaaa
acacaaccaaacaggtgatagaattgaacaaaaccatccaagatctaaaa
atggaagtagaaaacaataaagaaaatccaaagcgagacaactctataga
tagaaatcctaggaagaaatcaggaacaatagattggagaataaccaaca
gatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_99421746_99421961
seq2: B6Ng01-153O13.b_206_416

seq1  TTTCTTTTTCTTTTTTCCTTCTTTTTTTATTAGATATTTTCTTTATTAAC  50
      ||||||||||||||||||  | | |||||||| |||||||||| ||| ||
seq2  TTTCTTTTTCTTTTTTCC--CATATTTTATTATATATTTTCTTCATTTAC  48

seq1  ATTTCAAATGCTATCCCAAAAGTTCCCTATACCTTTCCCCTCCCCCCTCC  100
      ||||||||||||||||  ||| | ||| |||||   | ||| |||| |  
seq2  ATTTCAAATGCTATCCGGAAATTCCCCCATACC---CTCCTGCCCCAT--  93

seq1  CCGCTCCCCTACTCACCC---ACTCCCAC-TTCTTGCCCCTGGCGTTCCC  146
          ||||| || |||||   |||||| | ||| || | || || |||||
seq2  -TAATCCCCAACCCACCCACTACTCCCTCTTTCCTGACACTAGCATTCCC  142

seq1  TTGTACTGGGGCATATAAAGATTGCAAGACCTAGGGGCCTCTCTTCCCAA  196
       |||||||||||||||||   |  || || | | | | ||||| ||||| 
seq2  CTGTACTGGGGCATATAATCTTCCCATGATC-AAGTGTCTCTCCTCCCAT  191

seq1  TGATGGCCAACTAGGCCATC  216
      ||||| ||||||||||||||
seq2  TGATGACCAACTAGGCCATC  211

seq1: chrX_122923708_122924401
seq2: B6Ng01-153O13.g_71_764

seq1  GAATTCCTGATCTTTCCAAGACTTTGATCATGAATGGGTGTTGGATCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTTCCAAGACTTTGATCATGAATGGGTGTTGGATCTTG  50

seq1  TCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTT  100

seq1  GAGTTTTTTTATATAATGGATTACATTGATGGATTTGCATATTCTATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTTTATATAATGGATTACATTGATGGATTTGCATATTCTATCCT  150

seq1  GTTTCACTCCGAGACCAATCTTTGCTGGAGAGCATGTGGGACTCATAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTCCGAGACCAATCTTTGCTGGAGAGCATGTGGGACTCATAAGC  200

seq1  ATCAAAGCTTCTTGGACAGGATCCCATCAGTTCTTCATCCTCAGCCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGCTTCTTGGACAGGATCCCATCAGTTCTTCATCCTCAGCCAGGA  250

seq1  AGTAGAGCTGACCCTCAGACCACTTTGCACCTTCCCAGACAGAGGAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGCTGACCCTCAGACCACTTTGCACCTTCCCAGACAGAGGAGAGC  300

seq1  TTGATTAGAGCGAGTGCTCTGACCCCTGGGACTCAGGAGAGAATTAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTAGAGCGAGTGCTCTGACCCCTGGGACTCAGGAGAGAATTAAATG  350

seq1  CCCAGGATTGCTGACAGAGAGTAACAGATGGAACAAGCTCCATCCAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATTGCTGACAGAGAGTAACAGATGGAACAAGCTCCATCCAGAGA  400

seq1  TAGCTAGAACATCTAACACCAAAGTTTACCAGATGGTTAAAGGCAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGAACATCTAACACCAAAGTTTACCAGATGGTTAAAGGCAAACAT  450

seq1  AAGAACCAGTACTCCCAACACAGTGAGCCCTGGATACCCCAACAGACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAGTACTCCCAACACAGTGAGCCCTGGATACCCCAACAGACCAG  500

seq1  AAAAGCAAGATTCAGATTTAAAATCATATCTTATGATGCAGGTAGAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAGATTCAGATTTAAAATCATATCTTATGATGCAGGTAGAGGAT  550

seq1  TTTAAGAAGGACATTAATAACTCACTTAAAAAAATACTGGAGAACACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAGGACATTAATAACTCACTTAAAAAAATACTGGAGAACACTGC  600

seq1  TAAACAGGTAAATGTCCTTAAAGAGGAAACAAAAAGTCCATTAAAGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGGTAAATGTCCTTAAAGAGGAAACAAAAAGTCCATTAAAGAATT  650

seq1  ACAAAAATAAAAAATAAAATAAAACAAAACCAAAACACTACAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATAAAAAATAAAATAAAACAAAACCAAAACACTACAAA  694