BAC Information

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BAC

Clone NameB6Ng01-154D07
ChromosomeX (Build37)
Map Location 124,932,857 - 124,934,000
singlet/doubletsinglet
Overlap genenone
Upstream gene4930412D23Rik, LOC385523, LOC100040516, Mdm4-ps, EG237030
Downstream geneLOC100040538, LOC100040550, LOC100040562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154D07.bB6Ng01-154D07.g
ACCDH949314DH949315
length1,1441,228
definitionDH949314|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D07, 5' end.DH949315|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggtgaagacattttataaataatgatttctgacctctgaac
ttcaaagttcatcacctgaggtcatgcttagaatcctacatttctaagaa
gaattcaggtgatacagacataaatattatacgaatacacatttagaaac
tccacattaaagcttgtttctcttcacatgattgcaaccctgtaattttg
atcttataatacatgaaaagtggttatgaaatcaatgaatgcttagaagg
accactgaaaatctctgcttcactaggttgttttaagtggattttgtcat
ttctatcttaaatgttaaccacttagaaacatagagcattctttactcat
attccacttttaaagaatagttccacaggcttcagtggtacatgccttta
atcacaagcctcagaaggcagatgctggcacagttttgttagttcaatgc
aagggtggtatagtgtagtgagttccaggatagccaatgctgtgtaaaaa
gattatgtctcaacctgccccttcaaacgaaaataaaagaatttttttgt
agaaatgagtaatagttcattgattggaatatataaggaatattctccta
aaaataacaagtccatgtggttgtaagctgaaagcttctacttgtggtaa
aaaattgacatgtagcctttcttaatgggcactttcttaatactatctca
atgactagcagatatattattcagattttttacttctgtgacacaatccc
taagaaaagtaattttaaattattgattgattgattgattgattgattaa
gtttctttattggaaattaaataaataaaataataaataataagaaaagt
catttttaaaggagacaaggttatataaaaatttaaaggtagctgctcat
ggttgcttaaattgattatttgaggtggtctgtcatgaaacatttacatg
ggtgatagggatattatggtagaacaattaggccccactttataggcata
ggagaaaacaaacagaaattggaagtgctgtatctaataaaccctgtaat
ggtgctgatattatacctggatgactgacttcctgatactaagccctact
cgagatcccaccatcccagcaccggggagctaaggaacatatct
gaattccctgctaggaaaacatagctatcacattgccctaaaagacacag
agggcaacaaaccaaggaatgaaatatctactcaataagataatactaga
tatcagcacctagagttacaaccaacccaaactcagattcctagacacta
gcataaaacaaaatcagtgacatccaggacaatatgactctactggagct
taacaaccctactgcaacccttgatagatgcaataaagtgaagtacaaga
aatgaaccttaaaatagcatttattaatattatagaggcccttaaacaga
aaataaatctcctgaagaaatctggaaagaaaaagcagttgaaggaaatg
actaaagaagttcaagacttgaaagtaaaaatagaatcagtaaagaaaac
ctaaaaggaggtcttgaaattagaaaatgaaatattaaggaacttgaata
gtagcatcagaggcaaaccttggcaacagaatacaatagagaaaagaaaa
aatcaagcattaaaaacaaggtataaagttgaatatctcaatcaaaacag
tgtaaaatctaaaagatcaaggcataaaacatccaggaaatctgggaaaa
tattaaagaccaaatctacaaatgataggaataaaagaagaagaaaccta
agtcaaaggaacagaaaattatttttaataaaatcatagaagaatatttc
cctaaactaaagcagtagatgcctatcaatttacaagtacacagaaccct
acatatgctggacatgaaaagaaaatttctacagcacatattgagcaaaa
taacaaacatatagaagaaagaacagttaaagttacaagggtaaaggatc
aggtaacatataaaggcagacttttagttttagttttgtttttgtttatt
tatttatttattcaaaacaggcttttctgtgtagctctggctgtcctgaa
ctcactctgtagaccaggctggcctcgaactcagaaatttgcctgcctct
gcctcccaaatgttggataaagtgtgcgccaccacaccggatcaaagcag
acttttagtatacttgttcctcatgagacctaaccaagaaagacctgaca
aatgcctacaactctaaagaccccatgcgagccagaaatcctatggccac
aaactcaatctaatgatgcaacaaacccttccagaatatcccaatttaag
acccgataaccttaggtgtcacagtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_124932857_124934000
seq2: B6Ng01-154D07.b_47_1190 (reverse)

seq1  AGATATGTTCCTTAGCT-CCCGGTGCTGCGATTGGTGAGATCTTCGAAGG  49
      ||||||||||||||||| |||||||||| || ||||| |||| ||||  |
seq2  AGATATGTTCCTTAGCTCCCCGGTGCTGGGA-TGGTGGGATC-TCGA--G  46

seq1  TAGGGCTTAGTATCAGGAAGTCAGTCATCCAGGTATAATATTCAGCA-CA  98
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  TAGGGCTTAGTATCAGGAAGTCAGTCATCCAGGTATAATA-TCAGCACCA  95

seq1  TTACAGGGTATATTAAGATACAGCCACTTCCAATTTCTGTTTGTTTTCT-  147
      ||||||||| |||| |||||||| ||||||||||||||||||||||||| 
seq2  TTACAGGGTTTATT-AGATACAG-CACTTCCAATTTCTGTTTGTTTTCTC  143

seq1  CTATG-CTATAAAGTGAG--CTAATTTGTTCTACCATAATATCCCTATCA  194
      ||||| |||||||||| |  |||| |||||||||||||||||||||||||
seq2  CTATGCCTATAAAGTGGGGCCTAA-TTGTTCTACCATAATATCCCTATCA  192

seq1  -CCATGTAAATGTTTCATGACAGACCA-CTCAAATAATCAATTTAAGCAA  242
       |||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCCATGTAAATGTTTCATGACAGACCACCTCAAATAATCAATTTAAGCAA  242

seq1  CCATGAGCAGCTACCTTTAAATTTTTATATAACCTTGTCTCCTTTAAAAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGCAGCTACCTTTAAATTTTTATATAACCTTGTCTCCTTTAAAAA  292

seq1  TGACTTTTCTTATTATTTATTATTTTATTTATTTAATTTCCAATAAAGAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTCTTATTATTTATTATTTTATTTATTTAATTTCCAATAAAGAA  342

seq1  ACTTAATCAATCAATCAATCAATCAATCAATAATTTAAAATTACTTTTCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATCAATCAATCAATCAATCAATCAATAATTTAAAATTACTTTTCT  392

seq1  TAGGGATTGTGTCACAGAAGTAAAAAATCTGAATAATATATCTGCTAGTC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATTGTGTCACAGAAGTAAAAAATCTGAATAATATATCTGCTAGTC  442

seq1  ATTGAGATAGTATTAAGAAAGTGCCCATTAAGAAAGGCTACATGTCAATT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGATAGTATTAAGAAAGTGCCCATTAAGAAAGGCTACATGTCAATT  492

seq1  TTTTACCACAAGTAGAAGCTTTCAGCTTACAACCACATGGACTTGTTATT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCACAAGTAGAAGCTTTCAGCTTACAACCACATGGACTTGTTATT  542

seq1  TTTAGGAGAATATTCCTTATATATTCCAATCAATGAACTATTACTCATTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGAATATTCCTTATATATTCCAATCAATGAACTATTACTCATTT  592

seq1  CTACAAAAAAATTCTTTTATTTTCGTTTGAAGGGGCAGGTTGAGACATAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAAAAATTCTTTTATTTTCGTTTGAAGGGGCAGGTTGAGACATAA  642

seq1  TCTTTTTACACAGCATTGGCTATCCTGGAACTCACTACACTATACCACCC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTACACAGCATTGGCTATCCTGGAACTCACTACACTATACCACCC  692

seq1  TTGCATTGAACTAACAAAACTGTGCCAGCATCTGCCTTCTGAGGCTTGTG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTGAACTAACAAAACTGTGCCAGCATCTGCCTTCTGAGGCTTGTG  742

seq1  ATTAAAGGCATGTACCACTGAAGCCTGTGGAACTATTCTTTAAAAGTGGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGCATGTACCACTGAAGCCTGTGGAACTATTCTTTAAAAGTGGA  792

seq1  ATATGAGTAAAGAATGCTCTATGTTTCTAAGTGGTTAACATTTAAGATAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTAAAGAATGCTCTATGTTTCTAAGTGGTTAACATTTAAGATAG  842

seq1  AAATGACAAAATCCACTTAAAACAACCTAGTGAAGCAGAGATTTTCAGTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAAAATCCACTTAAAACAACCTAGTGAAGCAGAGATTTTCAGTG  892

seq1  GTCCTTCTAAGCATTCATTGATTTCATAACCACTTTTCATGTATTATAAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTAAGCATTCATTGATTTCATAACCACTTTTCATGTATTATAAG  942

seq1  ATCAAAATTACAGGGTTGCAATCATGTGAAGAGAAACAAGCTTTAATGTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTACAGGGTTGCAATCATGTGAAGAGAAACAAGCTTTAATGTG  992

seq1  GAGTTTCTAAATGTGTATTCGTATAATATTTATGTCTGTATCACCTGAAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCTAAATGTGTATTCGTATAATATTTATGTCTGTATCACCTGAAT  1042

seq1  TCTTCTTAGAAATGTAGGATTCTAAGCATGACCTCAGGTGATGAACTTTG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTAGAAATGTAGGATTCTAAGCATGACCTCAGGTGATGAACTTTG  1092

seq1  AAGTTCAGAGGTCAGAAATCATTATTTATAAAATGTCTTCACCAGAGAAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAGAGGTCAGAAATCATTATTTATAAAATGTCTTCACCAGAGAAT  1142

seq1  TC  1144
      ||
seq2  TC  1144