BAC Information

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BAC

Clone NameB6Ng01-154P23
ChromosomeX (Build37)
Map Location 159,737,303 - 159,878,884
singlet/doubletdoublet
Overlap genenone
Upstream geneReps2, LOC654358, LOC100041557, LOC667630, Rbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610
Downstream geneEG637051, Grpr, 1700045I19Rik, Ap1s2, Zrsr2, Car5b, Siah1b, Tmem27, Ace2, Bmx, Pir, Figf, Piga, Asb11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154P23.bB6Ng01-154P23.g
ACCDH949894DH949895
length951738
definitionDH949894|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P23, 5' end.DH949895|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,878,276 - 159,878,884)(159,737,303 - 159,738,035)
sequence
gaattccaagcacctattccaacaatataatacattgataagcctctgtt
cttctcagacccccttctccgcaatgtccttggctggaggcaggcaagtg
gagagaacttagaatcaacattctgttctccagtatggtccatgaaggtt
ccggatgagttatcgcctatctctgacaacgtctctactaggacagttgg
atacttccatctgaaagccaacccactttgggctcttgccaactagaaca
gccaggaaactggttatagatctgagctcttacaagatcctcgggaaaat
aatttctatttaagaagccctcttctttgcttgttccaaaactacaaata
taacaggaaggcgcacactcctctttgccgtctctgaccatgcaaaagga
tctcctctgagtgtcactgggacctcaaggaattcggctttttaagaggt
agagtccaggtaaaggctacttcctttttttattgttttatcacattctc
tgcccctccctcaactcttcccagatctacctgacttccctactcatcca
agtttgtgtcatttattctttataaagatttcaagattattctgtgccct
ccaaatattcatagatgcataaccttccacacaaacatggtgatttacca
gagattacattctcagaggaaactgttcatctttacctctcccagaagct
gtcagtttccaacagcttcttgactaggggttggatagtgtgtccaggcc
tactctccattctgggatttgttttaccttgggcacaagtttggtgcatg
gtttcccaaaacccagttccaactggattaacataagacctgatacccag
attcccatttaggaaaaaaaaaggaataagtttgaactcattgtcatggg
taagggctttttgaacagactctaatagtccagacattcaaccaaaaatt
a
gaattcttctggcttcttcaaccaggacaaaaacttagtaggagtcttca
cctcacccttgtggacctctttctagttgaccttcccagatatgcaaata
ggccctggacatgggttataagtcagtaaacctacttgtctaagctgacc
aattcaaaacgaggggaagggagagctcccaggccaccccaaacaagcaa
gcaagcaagcaagcaagcaagcaagcaagcaaacaatcccagccttctag
gcagagatggattttgatttctgaatcccctctctacttatgggtactct
gcctcttcgtgtgtgcagtgtgtgtgctgtatgtgtgtatgtttgtgtgt
gggatgtgtattttttttactatacttttatttaaaacttgtttgctttc
tatgactgtgatttacttcctgccttttaattctttaattgtcagaaaat
gagcccaacccaagactagcagccatgtctcaaaaaaaaaaaaaaaaaaa
tccagagccagaacaactgcaactgtgtctgtgcacttaaaactctgatg
tgtattatttctttgatgctacattttattgttatttttagtattcactt
ccaatgatagataacaaagctcatgaaaaatgttttttcctttcctttac
acagagaacgtgaaagtgaggaaagcaagggaacccacatatattttttt
atttctttcctttcttagaattgattccattggaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159878276_159878884
seq2: B6Ng01-154P23.b_47_655 (reverse)

seq1  AATATTTGGAGGGCACAGAATAATCTTGAAATCTTTATAAAGAATAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGGAGGGCACAGAATAATCTTGAAATCTTTATAAAGAATAAATG  50

seq1  ACACAAACTTGGATGAGTAGGGAAGTCAGGTAGATCTGGGAAGAGTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAACTTGGATGAGTAGGGAAGTCAGGTAGATCTGGGAAGAGTTGAG  100

seq1  GGAGGGGCAGAGAATGTGATAAAACAATAAAAAAAGGAAGTAGCCTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGCAGAGAATGTGATAAAACAATAAAAAAAGGAAGTAGCCTTTAC  150

seq1  CTGGACTCTACCTCTTAAAAAGCCGAATTCCTTGAGGTCCCAGTGACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTCTACCTCTTAAAAAGCCGAATTCCTTGAGGTCCCAGTGACACT  200

seq1  CAGAGGAGATCCTTTTGCATGGTCAGAGACGGCAAAGAGGAGTGTGCGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGATCCTTTTGCATGGTCAGAGACGGCAAAGAGGAGTGTGCGCC  250

seq1  TTCCTGTTATATTTGTAGTTTTGGAACAAGCAAAGAAGAGGGCTTCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTATATTTGTAGTTTTGGAACAAGCAAAGAAGAGGGCTTCTTAA  300

seq1  ATAGAAATTATTTTCCCGAGGATCTTGTAAGAGCTCAGATCTATAACCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATTATTTTCCCGAGGATCTTGTAAGAGCTCAGATCTATAACCAG  350

seq1  TTTCCTGGCTGTTCTAGTTGGCAAGAGCCCAAAGTGGGTTGGCTTTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGCTGTTCTAGTTGGCAAGAGCCCAAAGTGGGTTGGCTTTCAGA  400

seq1  TGGAAGTATCCAACTGTCCTAGTAGAGACGTTGTCAGAGATAGGCGATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTATCCAACTGTCCTAGTAGAGACGTTGTCAGAGATAGGCGATAA  450

seq1  CTCATCCGGAACCTTCATGGACCATACTGGAGAACAGAATGTTGATTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCGGAACCTTCATGGACCATACTGGAGAACAGAATGTTGATTCTA  500

seq1  AGTTCTCTCCACTTGCCTGCCTCCAGCCAAGGACATTGCGGAGAAGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTCCACTTGCCTGCCTCCAGCCAAGGACATTGCGGAGAAGGGGG  550

seq1  TCTGAGAAGAACAGAGGCTTATCAATGTATTATATTGTTGGAATAGGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAGAACAGAGGCTTATCAATGTATTATATTGTTGGAATAGGTGC  600

seq1  TTGGAATTC  609
      |||||||||
seq2  TTGGAATTC  609

seq1: chrX_159737303_159738035
seq2: B6Ng01-154P23.g_66_803

seq1  GAATTCTTCTGGCTTCTTCAACCAGGACAAAAACTTAGTAGGAGTCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGCTTCTTCAACCAGGACAAAAACTTAGTAGGAGTCTTCA  50

seq1  CCTCACCCTTGTGGACCTCTTTCTAGTTGACCTTCCCAGATATGCAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCTTGTGGACCTCTTTCTAGTTGACCTTCCCAGATATGCAAATA  100

seq1  GGCCCTGGACATGGGTTATAAGTCAGTAAACCTACTTGTCTAAGCTGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGACATGGGTTATAAGTCAGTAAACCTACTTGTCTAAGCTGACC  150

seq1  AATTCAAAACGAGGGGAAGGGAGAGCTCCCAGGCCACCCCAAACAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAACGAGGGGAAGGGAGAGCTCCCAGGCCACCCCAAACAAGCAA  200

seq1  GCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAATCCCAGCCTTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAATCCCAGCCTTCTAG  250

seq1  GCAGAGATGGATTTTGATTTCTGAATCCCCTCTCTACTTATGGGTACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGATGGATTTTGATTTCTGAATCCCCTCTCTACTTATGGGTACTCT  300

seq1  GCCTCTTCGTGTGTGCAGTGTGTGTGCTGTATGTGTGTATGTTTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCGTGTGTGCAGTGTGTGTGCTGTATGTGTGTATGTTTGTGTGT  350

seq1  GGGATGTGTATTTTTTTTACTATACTTTTATTTAAAACTTGTTTGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTGTATTTTTTTTACTATACTTTTATTTAAAACTTGTTTGCTTTC  400

seq1  TATGACTGTGATTTACTTCCTGCCTTTTAATTCTTTAATTGTCAGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTGTGATTTACTTCCTGCCTTTTAATTCTTTAATTGTCAGAAAAT  450

seq1  GAGCCCAACCCAAGACTAGCAGCCATGTCTCAAAAAAAAAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAACCCAAGACTAGCAGCCATGTCTCAAAAAAAAAAAAAAAAAAA  500

seq1  TCCAGAGCCAGAACAACTGCAACTGTGTCTGTGCACTTAAAACTCTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGCCAGAACAACTGCAACTGTGTCTGTGCACTTAAAACTCTGATG  550

seq1  TGTATTATTTCTTTGATGCTACATTTTATTGTTATTTTTAGTATTCACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATTTCTTTGATGCTACATTTTATTGTTATTTTTAGTATTCACTT  600

seq1  CCAATGATAGATAACAAAGCTCATG-AAAATGTATTTTCCTTTCC-TTAC  648
      ||||||||||||||||||||||||| ||||||| ||||||||||| ||||
seq2  CCAATGATAGATAACAAAGCTCATGAAAAATGTTTTTTCCTTTCCTTTAC  650

seq1  ACAGAGAACGTGAAAGTGAGG-AAGCAAGGGAA-CCACATATA-TTTTTT  695
      ||||||||||||||||||||| ||||||||||| ||||||||| ||||||
seq2  ACAGAGAACGTGAAAGTGAGGAAAGCAAGGGAACCCACATATATTTTTTT  700

seq1  ATTTCTTTCCTTTCTTAGAATTGTATCCATTGGAAGGT  733
      |||||||||||||||||||||||  |||||||||||||
seq2  ATTTCTTTCCTTTCTTAGAATTGATTCCATTGGAAGGT  738