BAC Information

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BAC

Clone NameB6Ng01-156A04
ChromosomeX (Build37)
Map Location 48,188,441 - 48,284,780
singlet/doubletdoublet
Overlap gene2610018G03Rik
Upstream geneOlfr1322, LOC100040344, Olfr1323, EG665816, Olfr1324, LOC100041788, 6720401G13Rik
Downstream geneLOC100040422, Rap2c, LOC385355, Mbnl3, LOC665866, LOC385356, Hs6st2, Usp26, LOC100040479, LOC665888
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156A04.bB6Ng01-156A04.g
ACCDH950632DH950633
length801,055
definitionDH950632|Mus musculus domesticus DNA, BAC clone: B6Ng01-156A04, 5' end.DH950633|Mus musculus domesticus DNA, BAC clone: B6Ng01-156A04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,284,701 - 48,284,780)(48,188,441 - 48,189,494)
sequence
tgcacacattccctcattgaaattcacaataaagtaggcgatagcaccac
ttctacttagtgggggtggggggtgggtgg
gaattctcctgggagaaagcaaacttcttatatgtcttagtattctcagt
gtttagtgcagcccctggcttggtgttcaagaagaacaaagtgaagaaaa
caggcaaggttgtgtgaacttaggcagaagatagggtcaaagtgagagtg
caaatacatgtcatctgcttcttagtaacaactccatcttaatcaactat
aggattctcatggcagatgttattacatagcacatggactcttaaaaaat
ccaagtagacttggggaaaaagttgtagaataggagatttggttgttttc
agtgttgagtttctgtccctcagatacttctcggtatctctgataatagc
ccttcagtgagtgcctgccattactgtactcttttcacgattgcttacat
atagttgtaacaaaaccatgaaagtttttctaagccagttgaaggttggt
aattttacacaactgcctttcttagagatcctggcaacaacttccttctc
ctcactgtgagctgatggcatagtcacttcctatttggtctcaactgcca
gggtttttttggtctgtttttaactgccacctttgactagaactgttcac
atgagaagcctatgaattaaagaacaagtagccaattcagagggggaaaa
tatcacccagaacggcagttgaacatcacttcatggtgacacatgaaaag
gctctcctgtgactaaaggctacaaccccaggatcaaagaggctacccga
tcttattacaaagacctcagtttccccaattaattctctcaagaaatgcc
tttcaatgttcttccacagaagtctctccactacccttgtggcaagacaa
actgtcattatggagtgacccatggagcaaccagtgtttctcttggcaca
aggagagcggtgagggctcctgtacaggcatctgccactctacagcatga
ttctgtcacctaagagggaggggtagccaaattggaaccagggaaggagc
cactctaccttaggtttcagcatcttttgcttgaagggattcaagatcca
cattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_48284701_48284780
seq2: B6Ng01-156A04.b_51_130 (reverse)

seq1  CCACCCACCCCCCACCCCCACTAAGTAGAAGTGGTGCTATCGCCTACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACCCCCCACCCCCACTAAGTAGAAGTGGTGCTATCGCCTACTTT  50

seq1  ATTGTGAATTTCAATGAGGGAATGTGTGCA  80
      ||||||||||||||||||||||||||||||
seq2  ATTGTGAATTTCAATGAGGGAATGTGTGCA  80

seq1: chrX_48188441_48189494
seq2: B6Ng01-156A04.g_66_1120

seq1  GAATTCTCCTGGGAGAAAGCAAACTTCTTATATGTCTTAGTATTCTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGGAGAAAGCAAACTTCTTATATGTCTTAGTATTCTCAGT  50

seq1  GTTTAGTGCAGCCCCTGGCTTGGTGTTCAAGAAGAACAAAGTGAAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTGCAGCCCCTGGCTTGGTGTTCAAGAAGAACAAAGTGAAGAAAA  100

seq1  CAGGCAAGGTTGTGTGAACTTAGGCAGAAGATAGGGTCAAAGTGAGAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAGGTTGTGTGAACTTAGGCAGAAGATAGGGTCAAAGTGAGAGTG  150

seq1  CAAATACATGTCATCTGCTTCTTAGTAACAACTCCATCTTAATCAACTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACATGTCATCTGCTTCTTAGTAACAACTCCATCTTAATCAACTAT  200

seq1  AGGATTCTCATGGCAGATGTTATTACATAGCACATGGACTCTTAAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCTCATGGCAGATGTTATTACATAGCACATGGACTCTTAAAAAAT  250

seq1  CCAAGTAGACTTGGGGAAAAAGTTGTAGAATAGGAGATTTGGTTGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAGACTTGGGGAAAAAGTTGTAGAATAGGAGATTTGGTTGTTTTC  300

seq1  AGTGTTGAGTTTCTGTCCCTCAGATACTTCTCGGTATCTCTGATAATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGAGTTTCTGTCCCTCAGATACTTCTCGGTATCTCTGATAATAGC  350

seq1  CCTTCAGTGAGTGCCTGCCATTACTGTACTCTTTTCACGATTGCTTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTGAGTGCCTGCCATTACTGTACTCTTTTCACGATTGCTTACAT  400

seq1  ATAGTTGTAACAAAACCATGAAAGTTTTTCTAAGCCAGTTGAAGGTTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGTAACAAAACCATGAAAGTTTTTCTAAGCCAGTTGAAGGTTGGT  450

seq1  AATTTTACACAACTGCCTTTCTTAGAGATCCTGGCAACAACTTCCTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACACAACTGCCTTTCTTAGAGATCCTGGCAACAACTTCCTTCTC  500

seq1  CTCACTGTGAGCTGATGGCATAGTCACTTCCTATTTGGTCTCAACTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTGAGCTGATGGCATAGTCACTTCCTATTTGGTCTCAACTGCCA  550

seq1  GGGTTTTTTTGGTCTGTTTTTAACTGCCACCTTTGACTAGAACTGTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTTTTGGTCTGTTTTTAACTGCCACCTTTGACTAGAACTGTTCAC  600

seq1  ATGAGAAGCCTATGAATTAAAGAACAAGTAGCCAATTCAGAGGGGGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGCCTATGAATTAAAGAACAAGTAGCCAATTCAGAGGGGGAAAA  650

seq1  TATCACCCAGAACGGCAGTTGAACATCACTTCATGGTGACACATGAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCCAGAACGGCAGTTGAACATCACTTCATGGTGACACATGAAAAG  700

seq1  GCTCTCCTGTGACTAAAGGCTACAACCCCAGGATCAAAGAGGCTACCCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCTGTGACTAAAGGCTACAACCCCAGGATCAAAGAGGCTACCCGA  750

seq1  TCTTATTACAAAGACCTCAGTTTCCCCAATTAATTCTCTCAAGAAATGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTACAAAGACCTCAGTTTCCCCAATTAATTCTCTCAAGAAATGCC  800

seq1  TTTCAATGTTCTTCCACAGAAGTCTCTCCACTACCCTTGTGGCAAGACAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCAATGTTCTTCCACAGAAGTCTCTCCACTACCCTTGTGGCAAGAC-A  849

seq1  AACTGTCATTATGGAGTGACCCATGGAGCAACCAGTGTTTCTCTTGGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCATTATGGAGTGACCCATGGAGCAACCAGTGTTTCTCTTGGCAC  899

seq1  AAGGAGAGCGGTGAGGGCTCCTGTACAGGCATCTGCCACTCTACAGCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGCGGTGAGGGCTCCTGTACAGGCATCTGCCACTCTACAGCATG  949

seq1  ATTCTGTCACCTAAGAGGGAGGGGTAGCCAAATTGGAACCAGGGAAGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCACCTAAGAGGGAGGGGTAGCCAAATTGGAACCAGGGAAGGAG  999

seq1  CCACTCTACCTTAGGTTTCAGGCATC-TGTGCTTGAAGTGA-TCCAGA-C  1047
      |||||||||||||||||||| ||||| | ||||||||| || || ||| |
seq2  CCACTCTACCTTAGGTTTCA-GCATCTTTTGCTTGAAGGGATTCAAGATC  1048

seq1  CACATTG  1054
      |||||||
seq2  CACATTG  1055