BAC Information

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BAC

Clone NameB6Ng01-157K02
ChromosomeX (Build37)
Map Location 120,870,181 - 120,871,263
singlet/doubletsinglet
Overlap genenone
Upstream gene3110007F17Rik, LOC100039751, LOC100039763, LOC665281, EG625591, LOC665325
Downstream geneEG382265, LOC665364, EG546368, LOC100038940, LOC100038941, EG625699, LOC100038942, LOC100039828, EG434843, EG665463
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K02.bB6Ng01-157K02.g
ACCDH951810DH951811
length1,2371,052
definitionDH951810|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K02, 5' end.DH951811|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggacgaaattcaagacagtctatcagaggtaaagtggggagag
agagtaggagcaaagaggaaacatggtgcaccaattaagcatacaggcct
ttccacgggtcttgaacctgaggaaaagttaatgtcagggaagaatacct
ggggagagattggaaggaaggagaaggaaaaagaaaagaaaaaaagatca
atcagcggaggtttctaggagaaggaacttatacccgcccctagatgagt
ttaagcggctagctcttagtagctcagaatcagaagaaggacttagctcc
tctgaagaaagggacttggaggaggaagcagtttgttataagggagaaag
gcaccagcaagataaaaagcgagctactcagtctagaaaaaggcaaaaag
tggctggcgaaagccagcttgctgctcgacctccagactgttggcttcag
ggtcctagtgcatctcagccctatttgaagaggtaccattcagagcttta
tgtgcagaggtatcattcagattcattcattccaaaagaggaacagagaa
aagtgcagcaagcgttcccagtttttgaaggagctgagggagggcgtgtt
cacgctccggtagagtatatacagattaaggacctcgcagaaacagtttg
caattatggagtcagtgcaaatttcactatagcacaagtcaaaaggcttg
cgaatcactctatgactcctggtgattggcagactgtagtaaaagctgca
gcccccagtatgggaatgaatcttgagtggaaagccttgtggcggactcc
tgccagacgcagcaagggccaatgccaccatggaaggggaccaaagaacg
tggacgtttgaattacttacaggtcaaggacagcatactgctaaccaaac
agattatcattaggagagtacgctcagatctcagctgccactgttaaggc
atggaaagcactctctagatggagagccagtgggcatttgaccaagatta
ctcaaggtgcacaggagttcttcttcagactttgtgacgatgacagagca
gcagggaggataattgagatcctgaagcagcaatgcctttatttgacatg
gttaggacagctaagcagaatgccgatcaccaataactccttaaagatat
agggtttacgaactgcttaagttgccttagagagaccttgagtcgctacc
atgccgggaatggccagactctactcttcttcagaga
gtctatcctttccaactgggctggaaaaggcagtactctgctacatatgt
gccaggggccatggactagcccaagtatgctctttggctggtggcttagt
ctctcagatcttccagggagtttgggttaatcgatactcttggtaatcct
atggggttgtcatcttcttcagttccttcaaacttttccctaactcttct
gtatgcgtccaaagattagctgtaattatctgcatctgtttcagtcagtt
gctgttagagacactaggggccctgtctatcaattggaggtggtctttcc
aggttccatctccccactgttgggtatttcggctaagatcaccaccgagt
tctgggagcctctcacatcccaggtctctgggactttctagagttcctaa
gagctccccaccaccagattacacgcctggtacctggatcagacaccctg
aaactggaatcatagatgatttcaacttacaaagaatgtgtagagaatcg
aatgttttctctggaagagtactggctatcactcctcaccactgagcaat
ctctccaattcaagaatagtatttctttaaggcaagatgtcttttctaga
agttcttaaattggaaattatagataaaactattttgtaacatgatgtta
aatgtctgagaatatgtttccatgtgtaccttaaaatactagattaattt
aaaatgttaattgtcactaaacaacattaataactatttttcattccatt
tttcatgcaggttattgaagactaaataaatagactgatgttatgccggg
catggttgtgcacgcctttaatcccagcactcgggaggcagaggtgggtg
gatttctgagttcgaggccagccaggtctacaaagtgagttctaggacag
ctggggcgccagggctatacagagaaattctatctcacaaaccaaaaaaa
tcaacaaaaaaacacaaaaaaaaaaacaaaaaaaaaaccaaaaaaaacca
aaataaattaataaaataaataagagctgattttattgattgatgcattt
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_120870181_120871263
seq2: B6Ng01-157K02.g_76_1127

seq1  GTCTATCCTTTCCAACTGGGCTGGAAAAGGCAGTACTCTGCTACATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCCTTTCCAACTGGGCTGGAAAAGGCAGTACTCTGCTACATATGT  50

seq1  GCCAGGGGCCATGGACTAGCCCAAGTATGCTCTTTGGCTGGTGGCTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGGCCATGGACTAGCCCAAGTATGCTCTTTGGCTGGTGGCTTAGT  100

seq1  CTCTCAGATCTTCCAGGGAGTTTGGGTTAATCGATACTCTTGGTAATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGATCTTCCAGGGAGTTTGGGTTAATCGATACTCTTGGTAATCCT  150

seq1  ATGGGGTTGTCATCTTCTTCAGTTCCTTCAAACTTTTCCCTAACTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTTGTCATCTTCTTCAGTTCCTTCAAACTTTTCCCTAACTCTTCT  200

seq1  GTATGCGTCCAAAGATTAGCTGTAATTATCTGCATCTGTTTCAGTCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCGTCCAAAGATTAGCTGTAATTATCTGCATCTGTTTCAGTCAGTT  250

seq1  GCTGTTAGAGACACTAGGGGCCCTGTCTATCAATTGGAGGTGGTCTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAGAGACACTAGGGGCCCTGTCTATCAATTGGAGGTGGTCTTTCC  300

seq1  AGGTTCCATCTCCCCACTGTTGGGTATTTCGGCTAAGATCACCACCGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCATCTCCCCACTGTTGGGTATTTCGGCTAAGATCACCACCGAGT  350

seq1  TCTGGGAGCCTCTCACATCCCAGGTCTCTGGGACTTTCTAGAGTTCCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAGCCTCTCACATCCCAGGTCTCTGGGACTTTCTAGAGTTCCTAA  400

seq1  GAGCTCCCCACCACCAGATTACACGCCTGGTACCTGGATCAGACACCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCCCACCACCAGATTACACGCCTGGTACCTGGATCAGACACCCTG  450

seq1  AAACTGGAATCATAGATGATTTCAACTTACAAAGAATGTGTAGAGAATCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAATCATAGATGATTTCAACTTACAAAGAATGTGTAGAGAATCG  500

seq1  AATGTTTTCTCTGGAAGAGTACTGGCTATCACTCCTCACCACTGAGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTCTCTGGAAGAGTACTGGCTATCACTCCTCACCACTGAGCAAT  550

seq1  CTCTCCAATTCAAGAATAGTATTTCTTTAAGGCAAGATGTCTTTTCTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAATTCAAGAATAGTATTTCTTTAAGGCAAGATGTCTTTTCTAGA  600

seq1  AGTTCTTAAATTGGAAATTATAGATAAAACTATTTTGTAACATGATGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAAATTGGAAATTATAGATAAAACTATTTTGTAACATGATGTTA  650

seq1  AATGTCTGAGAATATGTTTCCATGTGTACCTTAAAATACTAGATTAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGAGAATATGTTTCCATGTGTACCTTAAAATACTAGATTAATTT  700

seq1  AAAATGTTAATTGTCACTAAACAACATTAATAACTATTTTTCATTCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTAATTGTCACTAAACAACATTAATAACTATTTTTCATTCCATT  750

seq1  TTTCATGCAGGTTATTGAAGACTAAATAAATAGACTGATGTTATGCCGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCAGGTTATTGAAGACTAAATAAATAGACTGATGTTATGCCGGG  800

seq1  CATGGTTGTGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGTAGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATGGTTGTGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGTGGGTG  850

seq1  GATTTCTGAGTTCGAGGCCAGCCAGGTCTACAAAGTGAGTTCTAGGACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGAGTTCGAGGCCAGCCAGGTCTACAAAGTGAGTTCTAGGACAG  900

seq1  CTGGGGCGCCAGGGCTATACAGAGAAATTCTATCTCACAAAACCAAAAAA  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGGGGCGCCAGGGCTATACAGAGAAATTCTATCTCAC-AAACCAAAAAA  949

seq1  AAAAACAAACAAAAAAAAAAACAAACAAAAAAAAAAAAACAAAAAAAAAA  1000
      |  |||            ||| ||||| ||||||||||||||||||||  
seq2  ATCAAC------------AAAAAAACACAAAAAAAAAAACAAAAAAAA--  985

seq1  AAAACAAAAAAAAAAAACCAAAAAAATAAAATAAAATAAAAATAAAATAA  1050
           ||  ||||||||||        |||||||| |   ||||||||||
seq2  -----AACCAAAAAAAACC--------AAAATAAATT---AATAAAATAA  1019

seq1  AGAAG-TCTGATTTTATTGAATTGATGCATTTAA  1083
      | |||  |||||||||||| ||||||||||||||
seq2  ATAAGAGCTGATTTTATTG-ATTGATGCATTTAA  1052