BAC Information

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BAC

Clone NameB6Ng01-159B24
ChromosomeX (Build37)
Map Location 112,428,024 - 112,429,059
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039201, Klhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
Downstream geneLOC100039255, LOC623913, LOC546363, LOC100039277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159B24.bB6Ng01-159B24.g
ACCDH952883DH952884
length1,0251,177
definitionDH952883|Mus musculus domesticus DNA, BAC clone: B6Ng01-159B24, 5' end.DH952884|Mus musculus domesticus DNA, BAC clone: B6Ng01-159B24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattccttttgaaggcagaaatagtatacatgcaggctcatgcc
aatttgttttaatctatacagtgttaagcggggtatacaaactaaaagtt
gatgcaatcattattgactaaaatatcattatatttagggaagagaggtt
tcagtcacctggaagagactaatataaaatccatgactctttgatatatg
ttgctgtgcagatgtggataatgggatacagaatcacaaaaaaataactt
atgcttggaaaaactgatctgacagttatctatattgctacataggaaaa
tctgaaacccagctttgatatggtaagtaccattgtagaaataatcctat
ttaattcttcaaagaacaatatgaggtaaaagtagctagtggcaaaatta
ggtggatttaaattattcttttataagtcacttcaatccatttcacaaat
attaatgcgtcaattcatttgtcactggtcatttttttaatttcttgtgg
tctctagtgcagtgtttctctttaacccaatagtttttgagcctcacaga
tctcctcataaaatcgtcagccttagtatgttactacaaaatggttattt
aacattttttaaataaataaaacatcactccctcctccctcatgattatg
taaggtataaaatactcccttagacattttaggggccttttgagagattt
tagagcctttcagtatgtacacacacacacacatacataaacatatacgt
atgtatatattctgagatctgtgggcaagcataaatgtggatctcgggtc
caccattgacaactagagccaatttgggtaagaattgcatacttatgcta
aatactaaacatcttgtcttcaaatctgcatattaaagtcatgtgtgcta
gcatagctctatgtggaaatgtaatttttagaaatattaagtaaagtaca
tcatcagtgtgacagcatattgatctacataccttatacaatttaagaga
gaatatttttttgtgctatggtctt
gaattctcatctgaggaatactgaatgggtgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacccagagat
tccacctcacaccagtcagaatggctaagatcaaaatttcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaaacttttacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaaggaaagatcccgcaatacctctcctaggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
attcatagcagccttatttataatagccagaagctgggaagaacccagat
gcccctcaacagaggaatggacacagaaaatgtggaacatttacacaatg
gagtactactcagcaattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctgaagggcatcatcctgagggaggtaacccaatcacaaa
agaacttacacaatatgtactcactgataagtggatattagcccagaacc
tttgagcacccaagatataagacataatttgctaaacatatgaaactcaa
gaagaacaaagacctaagtgtggacattttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagaca
aaggatcggccatctagagactgccatatccagggatccatcccataatc
agcctccaaacactgacaccattgcatacactagcaagattttgctgaaa
ggacctagatatagctgtcttcttgtgagactatgccgggtctagcaaca
cagaagtgatgctcatagtcagctactggatggatcatagggcccccatg
gagagctagaagaagtaccagagctaagggatctgcacctatatgtgtac
aacataatgaactaccctgtaccctcaaagctcgtggctctatctgtaat
ggtaaccgaagctgtcctagttggccctcatgaaaaagaggcttctcatt
ggctcggtgcaatttaatcgcctcaaatacagggaatgctccgggcccag
aagtgagaatgatgagtatgctgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112428024_112429059
seq2: B6Ng01-159B24.b_44_1068

seq1  GAATTCCATTCCTTTTGAAGGCAGAAATAGTATACATGCAGGCTCATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCCTTTTGAAGGCAGAAATAGTATACATGCAGGCTCATGCC  50

seq1  AATTTGTTTTAATCTATACAGTGTTAAGCGGGGTATACAAACTAAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTTTAATCTATACAGTGTTAAGCGGGGTATACAAACTAAAAGTT  100

seq1  GATGCAATCATTATTGACTAAAATATCATTATATTTAGGGAAGAGAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAATCATTATTGACTAAAATATCATTATATTTAGGGAAGAGAGGTT  150

seq1  TCAGTCACCTGGAAGAGACTAATATAAAATCCATGACTCTTTGATATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACCTGGAAGAGACTAATATAAAATCCATGACTCTTTGATATATG  200

seq1  TTGCTGTGCAGATGTGGATAATGGGATACAGAATCACAAAAAAATAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGCAGATGTGGATAATGGGATACAGAATCACAAAAAAATAACTT  250

seq1  ATGCTTGGAAAAACTGATCTGACAGTTATCTATATTGCTACATAGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGAAAAACTGATCTGACAGTTATCTATATTGCTACATAGGAAAA  300

seq1  TCTGAAACCCAGCTTTGATATGGTAAGTACCATTGTAGAAATAATCCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACCCAGCTTTGATATGGTAAGTACCATTGTAGAAATAATCCTAT  350

seq1  TTAATTCTTCAAAGAACAATATGAGGTAAAAGTAGCTAGTGGCAAAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTTCAAAGAACAATATGAGGTAAAAGTAGCTAGTGGCAAAATTA  400

seq1  GGTGGATTTAAATTATTCTTTTATAAGTCACTTCAATCCATTTCACAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTTAAATTATTCTTTTATAAGTCACTTCAATCCATTTCACAAAT  450

seq1  ATTAATGCGTCAATTCATTTGTCACTGGTCATTTTTTTAATTTCTTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGCGTCAATTCATTTGTCACTGGTCATTTTTTTAATTTCTTGTGG  500

seq1  TCTCTAGTGCAGTGTTTCTCTTTAACCCAATAGTTTTTGAGCCTCACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGTGCAGTGTTTCTCTTTAACCCAATAGTTTTTGAGCCTCACAGA  550

seq1  TCTCCTCATAAAATCGTCAGCCTTAGTATGTTACTACAAAATGGTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCATAAAATCGTCAGCCTTAGTATGTTACTACAAAATGGTTATTT  600

seq1  AACATTTTTTAAATAAATAAAACATCACTCCCTCCTCCCTCATGATTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTTAAATAAATAAAACATCACTCCCTCCTCCCTCATGATTATG  650

seq1  TAAGGTATAAAATACTCCCTTAGACATTTTAGGGGCCTTTTGAGAGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTATAAAATACTCCCTTAGACATTTTAGGGGCCTTTTGAGAGATTT  700

seq1  TAGAGCC-TTCAGTATGTACACACACACACACATACATAAACATATACGT  749
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCTTTCAGTATGTACACACACACACACATACATAAACATATACGT  750

seq1  ATGTATATATTCTGAGATCTGTGGGCAAGCATAAATGTGGATCTCGGGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATATTCTGAGATCTGTGGGCAAGCATAAATGTGGATCTCGGGTC  800

seq1  CACCATTGACAACTAGAGCCAATTTGGGTAAGAATTGCATACTTATGCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGACAACTAGAGCCAATTTGGGTAAGAATTGCATACTTATGCTA  850

seq1  AATACTAAACATCTTGTCTTCAAATCTGCATATTAAAGTCATGTGTGCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAAACATCTTGTCTTCAAATCTGCATATTAAAGTCATGTGTGCTA  900

seq1  GCATAGCTCTATGTGGAAATGTAATTTTTAAGAAAATAATTAAGGTAAAG  949
      ||||||||||||||||||||||||||||| |||||   ||||| ||||||
seq2  GCATAGCTCTATGTGGAAATGTAATTTTT-AGAAA--TATTAA-GTAAAG  946

seq1  TTACATCATCAGTGTGACAGCATATTTGATCTACAATACCTTTATAACAA  999
       ||||||||||||||||||||||| ||||||||| ||||| |||| ||||
seq2  -TACATCATCAGTGTGACAGCATA-TTGATCTAC-ATACC-TTAT-ACAA  991

seq1  ATTTTAAAGAGAGAATTATTTTTTTGTGCTAT-GTCTT  1036
         || ||||||||| |||||||||||||||| |||||
seq2  ---TTTAAGAGAGAA-TATTTTTTTGTGCTATGGTCTT  1025