BAC Information

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BAC

Clone NameB6Ng01-159E19
ChromosomeX (Build37)
Map Location 58,589,079 - 58,590,021
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp11c, LOC666517, LOC631784, LOC100039611, LOC100039621, Gm715, Hspa9-ps1, EG236831, LOC666559, LOC671636, Sox3, EG631922, Rpl7l1-ps, LOC627159, EG631990, LOC632000, LOC100039759, EG245440
Downstream geneLOC100039778, Ldoc1, LOC654353, EG627299, LOC666654, LOC385367, LOC671741, 4933402E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159E19.bB6Ng01-159E19.g
ACCDH953001DH953002
length1,199408
definitionDH953001|Mus musculus domesticus DNA, BAC clone: B6Ng01-159E19, 5' end.DH953002|Mus musculus domesticus DNA, BAC clone: B6Ng01-159E19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagccattttcctcctaccatgaaatttccttaatctttatca
attattaaactactccccatttcataataacatgattttaagaatgctaa
atgaatggcatagtaaagtatttaactagtgaaaactgactgattcaatt
cagcaaaactctctgaccaacttgttgtgaatattagtatgtcattcatt
tgtgctgctaaacaatgctccattgtatgaacatgccagagttgatttag
ccaacaggagttgaagagcacctagactctttcttatttggtgttcctag
gataaagatattatacataccattatacaagtttcaattaacacagaagt
tccatttctctgaaatgattgtccaagtgtacaatttctaaggaatgtga
ttaatatggattgaattttatttaaagaaactaaatgtttcctagagaga
ttataccattctgacatctatttggacaaggagctggaatacctcataat
gttcatttcaaaggacttctgttttgtctggatacattttggtttcccaa
ttactgacttcttgagctctaactgtgaggtataaagtattctgtgtccc
atgggttcttaagccaatctgcttcaatgaatctttcagagtcttcttaa
ttttattttaaatatgatatctaagcaatttacctattcttataaagaat
aatggagtaactgtacctcaagttcacattcccagaagcagaagtctttg
agcttagttttgatgattctatctctaaagtctatttttctgtactttcc
agatcagtaaatttcattgatttgttcttcagttaactgttttcactcta
tgcagtccatactctgccacccagcacaacctataagacttttgtgtcag
ttatcatatttttcaattgttttcttatttccttcattttcatggctttc
gcctctttcctaagattttctaatttttgtttataaagaatatgtactgc
ttttcttaagccagcttcatgaggactgttttcaaaaactttcttccgaa
aatttcaacattttcttcatcttactaatcaaaaccttggctgtgtgtgc
tctttttaaatgtgggaagcctttattaattatttaccacttatctaaat
tttttcactactacctactcacttttctctaggaaagagattcttgttt
tctactttgctcgttgttttctgctgtccttgccattttgttgtttgagt
ctgaatctgtgcctgcctgaatgccatcttaggagtctatgggtcactat
atatctgtgcctatgtgtgtgtgtccacaacaaaaggctttgctgtctct
tttattgaacggcaaagaaagcatcatatggggagggaatgaggggtgct
atggtggtttgaatgtgcttggctcatgggaaacagcactattaggaggt
gtggccttgttggaatgggtgtgggcttgttggaggaagtatgtcactag
gtaggagggctttgaggtcctatgctcagcccattgtggaagagaccctc
cttcttgttgcccatgagacagtcttctccttatttggttcgcgatataa
aactctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_58589079_58590021
seq2: B6Ng01-159E19.b_294_1242 (reverse)

seq1  AAACAAGAAATCTCTTTCCTTATAAGGAAAGT-AGTA-GTAGTAGTTGAA  48
      ||||||| ||||||||||||    || ||||| |||| ||||||| ||||
seq2  AAACAAG-AATCTCTTTCCT--AGAGAAAAGTGAGTAGGTAGTAG-TGAA  46

seq1  AAAAATTTTAG-TAA-TGGTTAATAATTAATAATAGCTTCTCACATTTAT  96
      ||||  ||||| ||| |||| ||||||||||||  ||||| |||||||| 
seq2  AAAA--TTTAGATAAGTGGTAAATAATTAATAAAGGCTTCCCACATTTAA  94

seq1  AAA-AG-ACACACAGC--AAGTTTTGA-TAGTAAGATGAAGAAAATGTTG  141
      ||| || |||||||||  | ||||||| ||||||||||||||||||||||
seq2  AAAGAGCACACACAGCCAAGGTTTTGATTAGTAAGATGAAGAAAATGTTG  144

seq1  AAATTTTCTG-AGAAAGTTTTTG-AAACAGTCCTCATGAAGCTGGCTTAA  189
      |||||||| | |||||||||||| ||||||||||||||||||||||||||
seq2  AAATTTTCGGAAGAAAGTTTTTGAAAACAGTCCTCATGAAGCTGGCTTAA  194

seq1  G-AAAGCAGTACATATTCTTTATAAACAAAAATTAGAAAATCTTAGGAAA  238
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGTACATATTCTTTATAAACAAAAATTAGAAAATCTTAGGAAA  244

seq1  GAGGCGAAAGCCATGAAAATGAAGGAAATAAGAAAACAATTGAAAAATAT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGAAAGCCATGAAAATGAAGGAAATAAGAAAACAATTGAAAAATAT  294

seq1  GATAACTGACACAAAAGTCTTATAGGTTGTGCTGGGTGGCAGAGTATGGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTGACACAAAAGTCTTATAGGTTGTGCTGGGTGGCAGAGTATGGA  344

seq1  CTGCATAGAGTGAAAACAGTTAACTGAAGAACAAATCAATGAAATTTACT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATAGAGTGAAAACAGTTAACTGAAGAACAAATCAATGAAATTTACT  394

seq1  GATCTGGAAAGTACAGAAAAATAGACTTTAGAGATAGAATCATCAAAACT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGAAAGTACAGAAAAATAGACTTTAGAGATAGAATCATCAAAACT  444

seq1  AAGCTCAAAGACTTCTGCTTCTGGGAATGTGAACTTGAGGTACAGTTACT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAAAGACTTCTGCTTCTGGGAATGTGAACTTGAGGTACAGTTACT  494

seq1  CCATTATTCTTTATAAGAATAGGTAAATTGCTTAGATATCATATTTAAAA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATTCTTTATAAGAATAGGTAAATTGCTTAGATATCATATTTAAAA  544

seq1  TAAAATTAAGAAGACTCTGAAAGATTCATTGAAGCAGATTGGCTTAAGAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAAGAAGACTCTGAAAGATTCATTGAAGCAGATTGGCTTAAGAA  594

seq1  CCCATGGGACACAGAATACTTTATACCTCACAGTTAGAGCTCAAGAAGTC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGGACACAGAATACTTTATACCTCACAGTTAGAGCTCAAGAAGTC  644

seq1  AGTAATTGGGAAACCAAAATGTATCCAGACAAAACAGAAGTCCTTTGAAA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTGGGAAACCAAAATGTATCCAGACAAAACAGAAGTCCTTTGAAA  694

seq1  TGAACATTATGAGGTATTCCAGCTCCTTGTCCAAATAGATGTCAGAATGG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTATGAGGTATTCCAGCTCCTTGTCCAAATAGATGTCAGAATGG  744

seq1  TATAATCTCTCTAGGAAACATTTAGTTTCTTTAAATAAAATTCAATCCAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTCTCTAGGAAACATTTAGTTTCTTTAAATAAAATTCAATCCAT  794

seq1  ATTAATCACATTCCTTAGAAATTGTACACTTGGACAATCATTTCAGAGAA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCACATTCCTTAGAAATTGTACACTTGGACAATCATTTCAGAGAA  844

seq1  ATGGAACTTCTGTGTTAATTGAAACTTGTATAATGGTATGTATAATATCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTTCTGTGTTAATTGAAACTTGTATAATGGTATGTATAATATCT  894

seq1  TTATCCTAGGAACACCAAATAAGAAAGAGTCTAGGTGCTCTTCAACTCCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTAGGAACACCAAATAAGAAAGAGTCTAGGTGCTCTTCAACTCCT  944

seq1  GTTGG  943
      |||||
seq2  GTTGG  949