BAC Information

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BAC

Clone NameB6Ng01-164L16
ChromosomeX (Build37)
Map Location 85,383,277 - 85,534,205
singlet/doubletdoublet
Overlap genenone
Upstream geneIl1rapl1, LOC667876
Downstream geneEG667883, LOC667891, EG245506, LOC667911, LOC100041707, EG436213, LOC667919, LOC100041727, LOC667934
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164L16.bB6Ng01-164L16.g
ACCDH956975DH956976
length8031,063
definitionDH956975|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L16, 5' end.DH956976|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,383,277 - 85,383,866)(85,533,136 - 85,534,205)
sequence
gaattctattctgcaccttgtgttgaatgtcttccatctggccataagac
tttcagggatctctacgatgtggccttaagaaaataaaaagcaatagtgt
ctgggtctggtgattttatatgggatggatccccaggtaggacagtctct
ggatgatccttccttccatcacagtactgaacttcatctctgtaactcct
tccacgggtattttgttccccattttaagaaggagcgaaatatcaacact
ttggtcttccttcttcatgagtttcatgtgtgttgcaaattgtatcttgg
gtattctaagtttctgggctaatatccacttatcagtgagtgcatatcat
gtgtggtttttttaagattgggttacctcactcaggatgatatcctccag
atgcatcaatttgcctaagaatttcatgaattcattgtttttaattgctg
agtaatactccattgtgtaaatgtaccacattttctatatccattcctct
gttgagggacatctgggttctttccaccttctggctattataaataaggc
tgctatgaacatagtggatcatgtgtccttattacaagttggaacttctt
ctgggtatatgcccaggagaggaattgctggatcgtctggtagtactatg
tctaattttccgaggaactgccaccaaactcagacactattgcatatgcc
agcaagattttgctgacaggaccctgactagctctctcttgtgagtctat
gccaatgtctggcaaatacagaagtagatgctcacagtcattttttggat
gga
gaattcttactcagataactccctgctattaaattagtctccattcttat
ctatactgattttgactatttccttccttctactaaatttggcctcagtt
gttttttttttttgtttgtttgtttgttttttgttttttttctcctccca
ctataaagtagtgttaggttattttaaattaatcttttatgatatagaca
ctaacttctctaaaatttgctgttaaaactgctttcactatatcatataa
gctttggcattttctggtttcatattcatgtgtcccataaaatgttacct
tttcatgtgtccattgctccaaagcttgttcagaaaatttttgaattgat
ttctatgtatttgtggattttccaaagtttcttttgtgcttatttttaaa
gttccaatgttatcagaaaatatattgttttgagtcttaacatgtactct
accctagaaaacaatgatagacatatatagtcaagaagaatatgcatttt
aactggcaatagttaccactccagaatatttatatcttctcaaaggaaat
cctttaacttttattttttactttttttgattaggtatattcttcattta
catttcaaatgctatcccaaaatacccccccacttccctacccacctact
cccacttcttggcactggcattccctagtactgaggcataaaaaatttgc
aagaccaaggggcctcctttcccaatggtggccaactaggccatcttctg
atacatatgcagctagagacacgagctccaggggtactggttagtttata
ctgttgttccacctatagggttgtagacccctttagctccttgggtactt
gatggacctggagggtatcatcctgagtgaggtaacccaatcccaaagga
actcacaggatatgtactcactgataagtggatattagctcagaaactta
gaatacccaagatacaagatattatttgcaaacaaatgaactgagaagat
gagaccaaagtattgacactttaaccctttctaaaatgggaccaaacatc
catgggaggagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_85383277_85383866
seq2: B6Ng01-164L16.b_48_637

seq1  GAATTCTATTCTGCACCTTGTGTTGAATGTCTTCCATCTGGCCATAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTGCACCTTGTGTTGAATGTCTTCCATCTGGCCATAAGAC  50

seq1  TTTCAGGGATCTCTACGATGTGGCCTTAAGAAAATAAAAAGCAATAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGGATCTCTACGATGTGGCCTTAAGAAAATAAAAAGCAATAGTGT  100

seq1  CTGGGTCTGGTGATTTTATATGGGATGGATCCCCAGGTAGGACAGTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTGGTGATTTTATATGGGATGGATCCCCAGGTAGGACAGTCTCT  150

seq1  GGATGATCCTTCCTTCCATCACAGTACTGAACTTCATCTCTGTAACTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATCCTTCCTTCCATCACAGTACTGAACTTCATCTCTGTAACTCCT  200

seq1  TCCACGGGTATTTTGTTCCCCATTTTAAGAAGGAGCGAAATATCAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGGGTATTTTGTTCCCCATTTTAAGAAGGAGCGAAATATCAACACT  250

seq1  TTGGTCTTCCTTCTTCATGAGTTTCATGTGTGTTGCAAATTGTATCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTTCCTTCTTCATGAGTTTCATGTGTGTTGCAAATTGTATCTTGG  300

seq1  GTATTCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTGCATATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTGCATATCAT  350

seq1  GTGTGGTTTTTTTAAGATTGGGTTACCTCACTCAGGATGATATCCTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTTTTTTTAAGATTGGGTTACCTCACTCAGGATGATATCCTCCAG  400

seq1  ATGCATCAATTTGCCTAAGAATTTCATGAATTCATTGTTTTTAATTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCAATTTGCCTAAGAATTTCATGAATTCATTGTTTTTAATTGCTG  450

seq1  AGTAATACTCCATTGTGTAAATGTACCACATTTTCTATATCCATTCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATACTCCATTGTGTAAATGTACCACATTTTCTATATCCATTCCTCT  500

seq1  GTTGAGGGACATCTGGGTTCTTTCCACCTTCTGGCTATTATAAATAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGGACATCTGGGTTCTTTCCACCTTCTGGCTATTATAAATAAGGC  550

seq1  TGCTATGAACATAGTGGATCATGTGTCCTTATTACAAGTT  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGAACATAGTGGATCATGTGTCCTTATTACAAGTT  590

seq1: chrX_85533136_85534205
seq2: B6Ng01-164L16.g_69_1131 (reverse)

seq1  AACTCCTCCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGTAAAGTGT  50
      |||||||||||||| ||||| ||  || ||| ||  ||||| ||||||||
seq2  AACTCCTCCCATGGATGTTTGGT--CCCATTTTAGAAAGGGTTAAAGTGT  48

seq1  CCATACTTTGGTCTTCATTCTTCTTCAGTTTCATTTGTTTTGCAAATTAT  100
      | ||||||||||| ||| ||||| |||| |||||||| ||||||||| ||
seq2  CAATACTTTGGTC-TCA-TCTTC-TCAG-TTCATTTG-TTTGCAAATAAT  93

seq1  ATCTTGTATCTTGGGTATTCTAAGTTTCTGAGCTAATATCCACTTATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTATCTTGGGTATTCTAAGTTTCTGAGCTAATATCCACTTATCAG  143

seq1  TGAGTACATATCCTGTGAGTTCCTTTGGGATTGGGTTACCTCACTCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACATATCCTGTGAGTTCCTTTGGGATTGGGTTACCTCACTCAGGA  193

seq1  TGATACCCTCCAGGTCCATCAAGTACCCAAGGAGCTAAAGGGGTCTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCCTCCAGGTCCATCAAGTACCCAAGGAGCTAAAGGGGTCTACAA  243

seq1  CCCTATAGGTGGAACAACAGTATAAACTAACCAGTACCCCTGGAGCTCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAGGTGGAACAACAGTATAAACTAACCAGTACCCCTGGAGCTCGT  293

seq1  GTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCACCATTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCACCATTGGG  343

seq1  AAAGGAGGCCCCTTGGTCTTGCAAATTTTTTATGCCTCAGTACTAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGCCCCTTGGTCTTGCAAATTTTTTATGCCTCAGTACTAGGGAA  393

seq1  TGCCAGTGCCAAGAAGTGGGAGTAGGTGGGTAGGGAAGTGGGGGGGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTGCCAAGAAGTGGGAGTAGGTGGGTAGGGAAGTGGGGGGGTATT  443

seq1  TTGGGATAGCATTTGAAATGTAAATGAAGAATATACCTAATCAAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATAGCATTTGAAATGTAAATGAAGAATATACCTAATCAAAAAAAG  493

seq1  TAAAAAATAAAAGTTAAAGGATTTCCTTTGAGAAGATATAAATATTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAAAGTTAAAGGATTTCCTTTGAGAAGATATAAATATTCTGG  543

seq1  AGTGGTAACTATTGCCAGTTAAAATGCATATTCTTCTTGACTATATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTAACTATTGCCAGTTAAAATGCATATTCTTCTTGACTATATATGT  593

seq1  CTATCATTGTTTTCTAGGGTAGAGTACATGTTAAGACTCAAAACAATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTGTTTTCTAGGGTAGAGTACATGTTAAGACTCAAAACAATATA  643

seq1  TTTTCTGATAACATTGGAACTTTAAAAATAAGCACAAAAGAAACTTTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGATAACATTGGAACTTTAAAAATAAGCACAAAAGAAACTTTGGA  693

seq1  AAATCCACAAATACATAGAAATCAATTCAAAAATTTTCTGAACAAGCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACAAATACATAGAAATCAATTCAAAAATTTTCTGAACAAGCTTT  743

seq1  GGAGCAATGGACACATGAAAAGGTAACATTTTATGGGACACATGAATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAATGGACACATGAAAAGGTAACATTTTATGGGACACATGAATATG  793

seq1  AAACCAGAAAATGCCAAAGCTTATATGATATAGTGAAAGCAGTTTTAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAAAATGCCAAAGCTTATATGATATAGTGAAAGCAGTTTTAACA  843

seq1  GCAAATTTTAGAGAAGTTAGTGTCTATATCATAAAAGATTAATTTAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTTTAGAGAAGTTAGTGTCTATATCATAAAAGATTAATTTAAAAT  893

seq1  AACCTAACACTACTTTATAGTGGGAGGAGAAAAAAAACAAAAAACAAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAACACTACTTTATAGTGGGAGGAGAAAAAAAACAAAAAACAAACA  943

seq1  AACAAACAAAAAAAAAAAACAACTGAGGCCAAATTTAGTAGAAGGAAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAAAAAAAAAAACAACTGAGGCCAAATTTAGTAGAAGGAAGGA  993

seq1  AATAGTCAAAATCAGTATAGATAAGAATGGAGACTAATTTAATAGCAGGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCAAAATCAGTATAGATAAGAATGGAGACTAATTTAATAGCAGGG  1043

seq1  AGTTATCTGAGTAAGAATTC  1070
      ||||||||||||||||||||
seq2  AGTTATCTGAGTAAGAATTC  1063