BAC Information

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BAC

Clone NameB6Ng01-167E12
Chromosome17 (Build37)X (Build37)
Map Location 69,999,523 - 70,000,33018,494,662 - 18,495,843
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG622645, Epb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535
Downstream geneLOC100043630, LOC623112, LOC623143, Dlgap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167E12.bB6Ng01-167E12.g
ACCDH958821DH958822
length9711,163
definitionDH958821|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E12, 5' end.DH958822|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,999,523 - 70,000,330)(18,494,662 - 18,495,843)
sequence
gaattctattttttcttgaattgggaatttaatgagtcttcattccttca
ggcactgaaagtcaggatagaccagcaatgccttctgagcccagcggagg
ctgctaagggcaccagagtgctctccccattgcaggaccttgggatcacc
tcaggaacataggtaagtggaacacaacatcagctccaaagaatcgcgga
gggtcttgtgccagcaggaacagagacggaggaatcccgcccgaccagag
gctgggatccattcaggttggggccagccctgcctagcagagggcatcta
gggcaccagaggactctccacgccacaggagccctagcacacccaggacc
tcctgatcacctgagagcacgtgggtgatagaagcaacagagcttcttgg
tcagggtcccctcagaccttcatcctcagccaggaggaggagctgagacc
cagacccctgggcaccttccttgccagaggagagttggcctacagggagg
gttctgaccccagaactcaggaggtggatcagagctccagactgctggac
acctgccctgcaagaggagagcttgcctgtagagagtgctccgaccactg
gaactcaggtgagagttggactcccaggaatgctgactgaggctaacaga
atcataagagtaacaatctccaaccagagacagcttgatcattaacacca
gagatttccagatggcgaaaggcaaacataagaatcttactaacagaaac
caagaacactgggcatcatcagaacgcagtacgcccaccacaatgagtcc
tggataccccagcacacccgaaaagcaagatgcagatttaaatcatatct
catgatggtggtagaagatttaaagaaggcattaataactcacttaaaga
aatacaggagaacagtgctaaagaggtagaagcccttaaagaggaagcat
aaaaatccctcaaggaattac
gaattcttgacaaatgggtatgaatctatcatgggggttaggctactcat
atcagccctctggagttacaaattatctctactcacagccaagaatacgg
caattcttcacctttcctttcccatagtttttgtagcccttaaatttgta
ctcaaccatgtctagttttgctcattctatgtaaaagtaataccaggact
attctgagcctagctcttaagatgctcttcatgatttctagtaaaaatag
atgtttcagttagtgcaaaatatgaacaatttttgacccagaagagaaga
cataatcaccagcagtcctgcactcttaaaaactataaatggtcctctaa
gaaggaggaaaatgatactactgaatataatgaaaaacacctgaactgat
aactgcatgaataactatgaaaatgattaaatattatttaaatgccctta
atagacagttagctgtccaaaataggagtcagtgaactttctgtaaacgg
caagatcaaatacagcgtatgagccaggcattgcagctcacatatgtaat
tctagcactgtgaagtggatgggaagttctaggctaccctgagctacact
gaaaccctcaaagattttcatactttctggatcatttgagctatgccatg
agactcaatgtacagagaaagcaaccataaacaacacatacattttttct
gataatatttatttatccaaacaatgatctgtattcgattcataaactgt
aacttgtcaatcttgtcttaaagtaaatttaatgagaatgcattataggg
ttcatatttataaattgtacaacaggtgccaagaagagcctaagttccat
gccatgatgacaatgtgctaaacctctgaaactgtaagcccgccccaatt
aattacatgtgtttttatacgagttgctctggtcatggtgtctcttccca
ggtacagaacattgactagaacccatctctctacatctcacagtcagagt
ttgcttttagcttttatttttttcactttgttttcttttgaacagagtcc
ctcctcacccagcttctgttgtgctgagtagaagattctgtctttctgac
ttttatgatgctatctgaaaatgcaattgtattcatggttctcataattc
ctttttttggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_69999523_70000330
seq2: B6Ng01-167E12.b_127_917

seq1  CCTTCTGTGCCCAGAGGAGGCTGCTGAGGCCTCCAGAGTGCTCTCCACGC  50
      ||||||| |||||| |||||||||| ||| | |||||||||||||| |  
seq2  CCTTCTGAGCCCAGCGGAGGCTGCTAAGGGCACCAGAGTGCTCTCCCCAT  50

seq1  TGTGGGACCTCGGTATCACCTCAGGATCACAGGTGGGTGGAATGCAACAT  100
      ||  |||||| || |||||||||||| || ||||  ||||||  ||||||
seq2  TGCAGGACCTTGGGATCACCTCAGGAACATAGGTAAGTGGAACACAACAT  100

seq1  CAGCTCCAAAGAATCATAGAGGGTCTTTTGCTGGCAGGAGCAGAGACAGG  150
      |||||||||||||||   ||||||||| |||  |||||| ||||||| | 
seq2  CAGCTCCAAAGAATCGCGGAGGGTCTTGTGCCAGCAGGAACAGAGACGGA  150

seq1  GGAACCCAGCCCTATCAGATGCTGGGATCTGTTCTGGTTTGGGCCAGCCC  200
      |||| || |||| | |||| |||||||||  ||| |||| ||||||||||
seq2  GGAATCCCGCCCGACCAGAGGCTGGGATCCATTCAGGTTGGGGCCAGCCC  200

seq1  CTCATCTTCTGCTTGAACCTGGCCAAGGGCATCTAGGGCACAAGATGACT  250
                   ||  ||| ||  |||||||||||||||| ||| ||||
seq2  -------------TG--CCTAGCAGAGGGCATCTAGGGCACCAGAGGACT  235

seq1  CTCCACGACGCAGGACCCCTAGCACACCCAGGACCTCCTGATCACCTGAG  300
      ||||||| | ||||| ||||||||||||||||||||||||||||||||||
seq2  CTCCACGCCACAGGAGCCCTAGCACACCCAGGACCTCCTGATCACCTGAG  285

seq1  AGCACGTGGGCGATAGAAGCAACAGAGCTTTTAGGTCAGAGTCACCTCGG  350
      |||||||||| ||||||||||||||||||| | |||||| ||| |||| |
seq2  AGCACGTGGGTGATAGAAGCAACAGAGCTTCTTGGTCAGGGTCCCCTCAG  335

seq1  GTCTTCATCCTCAGCCATGAGGCAGAACTGAGACCCAGATCCCTGGGCAC  400
        ||||||||||||||| ||||  || |||||||||||| ||||||||||
seq2  ACCTTCATCCTCAGCCAGGAGGAGGAGCTGAGACCCAGACCCCTGGGCAC  385

seq1  ATTCCTTGCCAGAGGAGAGTCAGCCTACAGGGGAGAGTTCTGACCCCAGA  450
       |||||||||||||||||||  ||||||| ||||| ||||||||||||||
seq2  CTTCCTTGCCAGAGGAGAGTTGGCCTACA-GGGAGGGTTCTGACCCCAGA  434

seq1  ACTCAGGAGGTGGGTCAGAGCTCCAGACTGCTGGACACCTGCCCTGAAAG  500
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  ACTCAGGAGGTGGATCAGAGCTCCAGACTGCTGGACACCTGCCCTGCAAG  484

seq1  AGGAGAGCTTGCCTGCAGAGAGTGCTCTGACCATTGGAACTCAGGAGAGA  550
      ||||||||||||||| ||||||||||| ||||| ||||||||||| ||||
seq2  AGGAGAGCTTGCCTGTAGAGAGTGCTCCGACCACTGGAACTCAGGTGAGA  534

seq1  GTTGGACTCCCAGAAGTGCTGACAGAGGCTAAAAGAATCATAGGAGGATC  600
      ||||||||||||| | ||||||| |||||||| ||||||||| ||| | |
seq2  GTTGGACTCCCAGGAATGCTGACTGAGGCTAACAGAATCATAAGAGTAAC  584

seq1  AAGCTCCAACCAGAGACAGCTTGAACATTAACACCAGAGATTTCCAGATG  650
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATCTCCAACCAGAGACAGCTTGATCATTAACACCAGAGATTTCCAGATG  634

seq1  GCGAAAGGCAAACATATGAATCTTACTAACAGGAACCAAGACCACTGAGC  700
      |||||||||||||||| ||||||||||||||| |||||||| ||||| ||
seq2  GCGAAAGGCAAACATAAGAATCTTACTAACAGAAACCAAGAACACTGGGC  684

seq1  ATCATCAGAACCCAGTACGCCCACCACAACGAGTCCTGGATACCCTAACA  750
      ||||||||||| ||||||||||||||||| ||||||||||||||| | ||
seq2  ATCATCAGAACGCAGTACGCCCACCACAATGAGTCCTGGATACCCCAGCA  734

seq1  CACCCGAAAAGCAAGACGCAGATTTAAATTCATATCTCATGATGGTGGTA  800
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  CACCCGAAAAGCAAGATGCAGATTTAAA-TCATATCTCATGATGGTGGTA  783

seq1  GAAGATTT  808
      ||||||||
seq2  GAAGATTT  791

seq1: chrX_18494662_18495843
seq2: B6Ng01-167E12.g_69_1231

seq1  GAATTCTTGACAAATGGGTATGAATCTATCATGGGGGTTAGGCTACTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACAAATGGGTATGAATCTATCATGGGGGTTAGGCTACTCAT  50

seq1  ATCAGCCCTCTGGAGTTACAAATTATCTCTACTCACAGCCAAGAATACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCCTCTGGAGTTACAAATTATCTCTACTCACAGCCAAGAATACGG  100

seq1  CAATTCTTCACCTTTCCTTTCCCATAGTTTTTGTAGCCCTTAAATTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTCACCTTTCCTTTCCCATAGTTTTTGTAGCCCTTAAATTTGTA  150

seq1  CTCAACCATGTCTAGTTTTGCTCATTCTATGTAAAAGTAATACCAGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCATGTCTAGTTTTGCTCATTCTATGTAAAAGTAATACCAGGACT  200

seq1  ATTCTGAGCCTAGCTCTTAAGATGCTCTTCATGATTTCTAGTAAAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGCCTAGCTCTTAAGATGCTCTTCATGATTTCTAGTAAAAATAG  250

seq1  ATGTTTCAGTTAGTGCAAAATATGAACAATTTTTGACCCAGAAGAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAGTTAGTGCAAAATATGAACAATTTTTGACCCAGAAGAGAAGA  300

seq1  CATAATCACCAGCAGTCCTGCACTCTTAAAAACTATAAATGGTCCTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCACCAGCAGTCCTGCACTCTTAAAAACTATAAATGGTCCTCTAA  350

seq1  GAAGGAGGAAAATGATACTACTGAATATAATGAAAAACACCTGAACTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGAAAATGATACTACTGAATATAATGAAAAACACCTGAACTGAT  400

seq1  AACTGCATGAATAACTATGAAAATGATTAAATATTATTTAAATGCCCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCATGAATAACTATGAAAATGATTAAATATTATTTAAATGCCCTTA  450

seq1  ATAGACAGTTAGCTGTCCAAAATAGGAGTCAGTGAACTTTCTGTAAACGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAGTTAGCTGTCCAAAATAGGAGTCAGTGAACTTTCTGTAAACGG  500

seq1  CAAGATCAAATACAGCGTATGAGCCAGGCATTGCAGCTCACATATGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCAAATACAGCGTATGAGCCAGGCATTGCAGCTCACATATGTAAT  550

seq1  TCTAGCACTGTGAAGTGGATGGGAAGTTCTAGGCTACCCTGAGCTACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCACTGTGAAGTGGATGGGAAGTTCTAGGCTACCCTGAGCTACACT  600

seq1  GAAACCCTCAAAGATTTTCATACTTTCTGGATCATTTGAGCTATGCCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTCAAAGATTTTCATACTTTCTGGATCATTTGAGCTATGCCATG  650

seq1  AGACTCAATGTACAGAGAAAGCAACCATAAACAACACATACATTTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAATGTACAGAGAAAGCAACCATAAACAACACATACATTTTTTCT  700

seq1  GATAATATTTATTTATCCAAACAATGATCTGTATTCGATTCATAAACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATTTATTTATCCAAACAATGATCTGTATTCGATTCATAAACTGT  750

seq1  AACTTGTCAATCTTGTCTTAAAGTAAATTTAATGAGAATGCATTATAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTCAATCTTGTCTTAAAGTAAATTTAATGAGAATGCATTATAGGG  800

seq1  TTCATATTTATAAATTGTACAACAGGTGCCAAGAAGAGCCTAAGTTCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTATAAATTGTACAACAGGTGCCAAGAAGAGCCTAAGTTCCAT  850

seq1  GCCATGATGACAATGTGCTAAACCTCTGAAACTGTAAGCCCGCCCCAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGATGACAATGTGCTAAACCTCTGAAACTGTAAGCCCGCCCCAATT  900

seq1  AATTACATGTGTTTTTATACGAGTTGCTCTGGTCATGGTGTCTCTTCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATGTGTTTTTATACGAGTTGCTCTGGTCATGGTGTCTCTTCCCA  950

seq1  GGTACAGAACATTGACTAAGAACCCATCTCTCTACATCCTCACCAGTCAG  1000
      ||||||||||||||||| ||||||||||||||||||| |||| |||||||
seq2  GGTACAGAACATTGACT-AGAACCCATCTCTCTACAT-CTCA-CAGTCAG  997

seq1  AGTTTGCTTTTAGCTTTTAATTTTTTTCACTTTGTTTTCTTTTGAAACAG  1050
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  AGTTTGCTTTTAGCTTTT-ATTTTTTTCACTTTGTTTTCTTTTG-AACAG  1045

seq1  AGTCCCTCCTCACCCAGCTTCCTGTGTGCTGAAGTTAGAGATTCTGTC-T  1099
      |||||||||||||||||||||   ||||||| |||   |||||||||| |
seq2  AGTCCCTCCTCACCCAGCTTCTGTTGTGCTG-AGTAGAAGATTCTGTCTT  1094

seq1  TCTGACTTTTTAATGATTGCTATCTTGGAAGATGCAAAATTGTATCTCAT  1149
      ||||||||||  |||| ||||||||  ||| ||||  |||||||| ||||
seq2  TCTGACTTTT--ATGA-TGCTATCT--GAAAATGC--AATTGTAT-TCAT  1136

seq1  TGAGTTCTTCATATATTCCTTTTTTTTTGGAAA  1182
         |||| ||||| |||||  ||||||||||||
seq2  --GGTTC-TCATA-ATTCC--TTTTTTTGGAAA  1163