BAC Information

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BAC

Clone NameB6Ng01-167E14
ChromosomeX (Build37)
Map Location 144,302,421 - 144,476,124
singlet/doubletdoublet
Overlap geneEG624023, LOC666184
Upstream geneEG245663, Htr2c, Il13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995
Downstream geneLOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545, LOC666837, LOC100039553, LOC100034729, LOC666861, EG666864, LOC434866, EG666868, EG624260, LOC434865, EG624310
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167E14.bB6Ng01-167E14.g
ACCDH958825DH958826
length1,203989
definitionDH958825|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E14, 5' end.DH958826|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,302,421 - 144,303,381)(144,475,138 - 144,476,124)
sequence
gaattcagtaggaattcagtgagaatattatctattcattaacattcaaa
tttacttcaagtagagatggtgaaactaattaggcattacaaaaaacaga
gctagaatacctcagggctagtctgcagggtgatttcttaggacagtagc
cagtcttacccaaacaagggaatgtacaatggcctagctaataggtaggt
ttaccatgtgagagttagggaatcccactgagacaggaaacttcactaca
gccaggtataacaggcaacattgcatattagaagcaagttggtgaattct
tctgacaactggagattctccacagatatttaagagaaaatccaatttca
ctcatacaagaatttatcaaggcctaggaaataggatgtttgtggtattg
cattattcatgagaaggtctgctagagcagaactccctggtgctagcttt
cacaaggctcaaaggagtagcacaaattgtaattagggtgtgaaatcctt
acctgtgattagctgaccctaagcagagctgttttatctttactgaaata
tgacatggttcctgtaaatccttttgaagtcattcctttgttttgtgtca
ggtaacttcaatgtactttgcctgctgtgacattctacctctttgttttc
tatattatattctacacaacctctcctgttgattttgtctgtcattccct
gactccttgtcaccctgtaactagagacccattctatgcagacagggaac
aaaaagggtctgcggcaggggactagtttaagaacttaggacaaaagctg
gtgtgaggtatagggagggaaacacaactgtcagtccagtagggcaccca
atatgaggtgtctggcacatcctcacactctcaagtcatttcttcctgca
gagcttccaggcaggactaagagatactaagaaaccaggaaatataaatc
tcttctgatgtccttggtctccagagaaacattctcagacctttggagcc
tagcatattagacacatgctcaagatcatgatgtatcatatgtaaaatac
aaaacaaaaatgctgtaatgtctcctagatggagatttagtacaataata
aaaatgttccgaattcacctgagtaaggagtaacaagtaaattctctaaa
gcttcagctcagagtaggtcagcacatttgaagctaaggttattaagagt
taa
gaattctttgtttagctctgtaccccatttttaaatggggttatgtgatt
ttctggagtccagcttcacaaaagaggtcacttgatatgcactcaggaat
tgtacagactagtgattgttactctgttctgggtctctgcagtggagttg
gaatgttccagagaacatccactccttcatcatgggttgtagagggagaa
tatatgtgcagctcagttgagcagtgtccaactgagctgtagagtgtgag
cagtggagaaacttattgatgtacatggtaccacttgtcattgaagctac
tctctattgctctaaatgggaagtcaggcaggtccactcttgacgcctac
cacagactgagactgacactggaaaaaacagtatcttcatagtttggctc
aaatttagggagtaaagattatctcaattttcttttgtctctagcacctt
tagggtgtatagaaaagacaacaagatttggggaaatggctcagttggcc
aagtacttgccagtaagtgtaaggatccaagttgcacccagggccccatt
aagataagccatgatgtgtggctgtaagcctgaagagcccaggtccttta
tggcagaggggttttccatcttatctttttcctccaccccaacacctgcc
ttggaaatatgttttttgtttgtttgtttgtttgtttgtttgtttttgtt
ttttcttgatcagtcattctagctttttctgcaatttgaagtctgtaatc
gattacttgaggacagaagatcctcaaaatcctctggacgtttcttctga
acgttgctatcatctaatatcagtagtgtctaaatttcaaatgcttaatg
ttgtgtgtggagagatgggctgacaaacctgagcttggtggtagatggga
gaacttacctatgtatgatgttttgagtcatgtgttcagtcacagcacct
ttggtgggacacacaggtgtagctttaaaatgttgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_144302421_144303381
seq2: B6Ng01-167E14.b_316_1250

seq1  CATTGCATATTAGAAGCAAGTTGGTGAATTCTTCTGACAACTGGAGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCATATTAGAAGCAAGTTGGTGAATTCTTCTGACAACTGGAGATTC  50

seq1  TCCACAGATATTTAAGAGAAAATCCAATTTCACTCATACAAGAATTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGATATTTAAGAGAAAATCCAATTTCACTCATACAAGAATTTATC  100

seq1  AAGGCCTAGGAAATAGGATGTTTGTGGTATTGCATTATTCATGAGAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTAGGAAATAGGATGTTTGTGGTATTGCATTATTCATGAGAAGGT  150

seq1  CTGCTAGAGCAGAACTCCCTGGTGCTAGCTTTCACAAGGCTCAAAGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGAGCAGAACTCCCTGGTGCTAGCTTTCACAAGGCTCAAAGGAGT  200

seq1  AGCACAAATTGTAATTAGGGTGTGAAATCCTTACCTGTGATTAGCTGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAATTGTAATTAGGGTGTGAAATCCTTACCTGTGATTAGCTGACC  250

seq1  CTAAGCAGAGCTGTTTTATCTTTACTGAAATATGACATGGTTCCTGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGAGCTGTTTTATCTTTACTGAAATATGACATGGTTCCTGTAAA  300

seq1  TCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAATGTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAATGTACTT  350

seq1  TGCCTGCTGTGACATTCTACCTCTTTGTTTTCTATATTATATTCTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTGTGACATTCTACCTCTTTGTTTTCTATATTATATTCTACACA  400

seq1  ACCTCTCCTGTTGATTTTGTCTGTCATTCCCTGACTCCTTGTCACCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCTGTTGATTTTGTCTGTCATTCCCTGACTCCTTGTCACCCTGT  450

seq1  AACTAGAGACCCATTCTATGCAGACAGGGAACAAAAAGGGTCTGCGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGACCCATTCTATGCAGACAGGGAACAAAAAGGGTCTGCGGCAG  500

seq1  GGGACTAGTTTAAGAACTTAGGACAAAAGCTGGTGTGAGGTATAGGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAGTTTAAGAACTTAGGACAAAAGCTGGTGTGAGGTATAGGGAGG  550

seq1  GAAACACAACTGTCAGTCCAGTAGGGCACCCAATATGAGGTGTCTGGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAACTGTCAGTCCAGTAGGGCACCCAATATGAGGTGTCTGGCAC  600

seq1  ATCCTCACACTCTCAAGTCATTTCTTCCTGCAGAGCTTCCAGGCAGGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCACACTCTCAAGTCATTTCTTCCTGCAGAGCTTCCAGGCAGGACT  650

seq1  AAGAGATACTAAGAAACCAGGAAATATAAATCTCTTCTGATGTCCTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATACTAAGAAACCAGGAAATATAAATCTCTTCTGATGTCCTTGGT  700

seq1  CTCCAGAAGAAACATTCTCAGACCTTTGGAGCCTAGCATATTAGAACACA  750
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCCAG-AGAAACATTCTCAGACCTTTGGAGCCTAGCATATTAG-ACACA  748

seq1  TGCTCAAAGATCATGATGTATCATATGTTAAAATACAAAACAAAAATGCT  800
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCTC-AAGATCATGATGTATCATATG-TAAAATACAAAACAAAAATGCT  796

seq1  GTTAAAATGTCT-CTAGATGGAGAATTTAGTACAATAATAAAAAAATGTT  849
      ||   ||||||| |||||||||| |||||||||||||||  |||||||||
seq2  GT---AATGTCTCCTAGATGGAG-ATTTAGTACAATAAT--AAAAATGTT  840

seq1  CCCAGATTCAACTGAAGTAAAGGAGTAACAGAGTAAAAATTTCTCTAAAG  899
      || | ||||| ||| ||| ||||||||||| ||||||   ||||||||| 
seq2  CCGA-ATTCACCTG-AGT-AAGGAGTAACA-AGTAAA---TTCTCTAAA-  882

seq1  GCTTCAGCTCAAGTAGTAGGTCAGCAAACATATTTGAAAGCTAGGGTTAT  949
      |||||||||||   ||||||||||    || ||||| |||||| ||||||
seq2  GCTTCAGCTCA--GAGTAGGTCAG----CACATTTG-AAGCTAAGGTTAT  925

seq1  TTAAAGAGTTAA  961
      |  |||||||||
seq2  T--AAGAGTTAA  935

seq1: chrX_144475138_144476124
seq2: B6Ng01-167E14.g_69_1057 (reverse)

seq1  TCCACAAACATTTTAAAGCTACACCTGTGTGTCCCACCAAAGGTGCTGGT  50
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCAC-AACATTTTAAAGCTACACCTGTGTGTCCCACCAAAGGTGCT-GT  48

seq1  GACTGAACACATGACTC-ACACATCATACATAGGTAAGTTCTCCCATCTA  99
      ||||||||||||||||| | ||||||||||||||||||||||||||||||
seq2  GACTGAACACATGACTCAAAACATCATACATAGGTAAGTTCTCCCATCTA  98

seq1  CCACCAAGCTTCAGGTTTGTCAG-CCATCTCTCCACACAC-ACATTAAGC  147
      ||||||||| ||||||||||||| |||||||||||||||| |||||||||
seq2  CCACCAAGC-TCAGGTTTGTCAGCCCATCTCTCCACACACAACATTAAGC  147

seq1  ATTTGAAA-TTAGACACTACTGATATTAGATGATAGCAACGTTCAGAAG-  195
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  ATTTGAAATTTAGACACTACTGATATTAGATGATAGCAACGTTCAGAAGA  197

seq1  AACGTCCAGAGGATTTTGAGGATCTTCTGTCCTCAAGTAATCGATTACAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCCAGAGGATTTTGAGGATCTTCTGTCCTCAAGTAATCGATTACAG  247

seq1  ACTTCAAATTGCAGAAAAAGCTAGAATGACTGATCAAGAAAAAACAAAAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAATTGCAGAAAAAGCTAGAATGACTGATCAAGAAAAAACAAAAA  297

seq1  CAAACAAACAAACAAACAAACAAACAAAAAACATATTTCCAAGGCAGGTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACAAACAAACAAAAAACATATTTCCAAGGCAGGTG  347

seq1  TTGGGGTGGAGGAAAAAGATAAGATGGAAAACCCCTCTGCCATAAAGGAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTGGAGGAAAAAGATAAGATGGAAAACCCCTCTGCCATAAAGGAC  397

seq1  CTGGGCTCTTCAGGCTTACAGCCACACATCATGGCTTATCTTAATGGGGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCTTCAGGCTTACAGCCACACATCATGGCTTATCTTAATGGGGC  447

seq1  CCTGGGTGCAACTTGGATCCTTACACTTACTGGCAAGTACTTGGCCAACT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGCAACTTGGATCCTTACACTTACTGGCAAGTACTTGGCCAACT  497

seq1  GAGCCATTTCCCCAAATCTTGTTGTCTTTTCTATACACCCTAAAGGTGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATTTCCCCAAATCTTGTTGTCTTTTCTATACACCCTAAAGGTGCT  547

seq1  AGAGACAAAAGAAAATTGAGATAATCTTTACTCCCTAAATTTGAGCCAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAAAAGAAAATTGAGATAATCTTTACTCCCTAAATTTGAGCCAAA  597

seq1  CTATGAAGATACTGTTTTTTCCAGTGTCAGTCTCAGTCTGTGGTAGGCGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAGATACTGTTTTTTCCAGTGTCAGTCTCAGTCTGTGGTAGGCGT  647

seq1  CAAGAGTGGACCTGCCTGACTTCCCATTTAGAGCAATAGAGAGTAGCTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGGACCTGCCTGACTTCCCATTTAGAGCAATAGAGAGTAGCTTC  697

seq1  AATGACAAGTGGTACCATGTACATCAATAAGTTTCTCCACTGCTCACACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAGTGGTACCATGTACATCAATAAGTTTCTCCACTGCTCACACT  747

seq1  CTACAGCTCAGTTGGACACTGCTCAACTGAGCTGCACATATATTCTCCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCTCAGTTGGACACTGCTCAACTGAGCTGCACATATATTCTCCCT  797

seq1  CTACAACCCATGATGAAGGAGTGGATGTTCTCTGGAACATTCCAACTCCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACCCATGATGAAGGAGTGGATGTTCTCTGGAACATTCCAACTCCA  847

seq1  CTGCAGAGACCCAGAACAGAGTAACAATCACTAGTCTGTACAATTCCTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAGACCCAGAACAGAGTAACAATCACTAGTCTGTACAATTCCTGA  897

seq1  GTGCATATCAAGTGACCTCTTTTGTGAAGCTGGACTCCAGAAAATCACAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATCAAGTGACCTCTTTTGTGAAGCTGGACTCCAGAAAATCACAT  947

seq1  AACCCCATTTAAAAATGGGGTACAGAGCTAAACAAAGAATTC  987
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCATTTAAAAATGGGGTACAGAGCTAAACAAAGAATTC  989