MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-168B15
Chromosome	X (Build37)
Map Location	78,930,279 - 78,931,441
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Tmem47, LOC100041462, LOC100041474, 4930595M18Rik
Downstream gene	EG667799, EG629310
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tmem47 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192216 MGI:2177570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041462 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC100041474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	4930595M18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245492 MGI:3045300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667799 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667799 MGI:3648640
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 626 ESTs, 21 Proteins pseudo : _no_value

name	EG629310 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629310 MGI:3647741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Tmem47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20270284 GeneID:192216 MGI:2177570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 47 transcript_id : NM_138751.1

name	Tmem47 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365049 GeneID:192216 MGI:2177570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 47 transcript_id : NM_175771.3

name	LOC100041462 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271724 GeneID:100041462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to synaptosomal-associated protein 23 transcript_id : XM_001476422.1

name	4930595M18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382854 GeneID:245492 MGI:3045300
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930595M18 gene transcript_id : NM_173435.2

name	Tmem47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270285 CCDS:CCDS30254.1 GeneID:192216 MGI:2177570
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : transmembrane 4 superfamily member 10 product : transmembrane protein 47 protein_id : NP_620090.1

name	Tmem47 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461139 CCDS:CCDS30254.1 GeneID:192216 MGI:2177570
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : transmembrane 4 superfamily member 10 product : transmembrane protein 47 protein_id : NP_786965.1

name	LOC100041462 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271725 GeneID:100041462
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476472.1

name	4930595M18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734114 GeneID:245492 MGI:3045300
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC245492 protein_id : NP_775611.1

name	LOC100041474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041474
definition	number : 4 pseudo : _no_value

name	LOC100041474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041474
definition	number : 3 pseudo : _no_value

name	LOC100041474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041474
definition	number : 2 pseudo : _no_value

name	LOC100041474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041474
definition	number : 1 pseudo : _no_value

name	EG667799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667799
definition	number : 1 pseudo : _no_value

name	EG629310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629310
definition	number : 3 pseudo : _no_value

name	EG629310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629310
definition	number : 2 pseudo : _no_value

name	EG629310 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629310
definition	number : 1 pseudo : _no_value

clone name	MSMg01-443N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296D08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-529N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111K02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-168B15.b	B6Ng01-168B15.g
ACC	DH959429	DH959430
length	1,152	1,231
definition	DH959429\|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B15, 5' end.	DH959430\|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B15, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttgttcagttctgagccccattttttaatggggttatttgatt caattccagatttctttacacataagatggaatggtccagcagctaggtc cactgtcacagactttaattccgttcaattgatatgtcgcctcatgggag aaactgaaaggagatctagttagggaacagcagaacggcaaacttaaagc agggaccatgccgttgtagaagctggtgaggtgggacagaatattctgga cgaaattcaagacagtctatcagaggcagagcggggagagagagtaagaa ttgaaacgaaacaaggtgcactcaagaataaaggcctttccacggacctt gagcccgaggaaaagataatgtagggaaagaatgcccggggtgagtttag aaaaggagaaaagagaaaaacaaaggctaatataaaatataaagatataa aggataatataaaatataaagatacaaaggataatataaaatataaagat acaaaggataatataaattaagtcaatttaccctcctctcgaggactttg actattgaggcagccttcattaaaggcttaaacttagctctcagggccac tgtgcctcctttccattctctggcagtattcccagaagaaggagataagg aagtagagtctgaacatgagagagagaaaatacgttttaggaaagcagtt atcccctgtttgggatcttttagcaaaaaaagagaaaaaatgaaaataag ctatttcagagctctcctgggaacagaaggaaaatgggagacgtcctact tcctctctggctcctatggagatattcttagctctggttaggatatctgt gtccctttgagacaccaagttctcttcactgtctgtctgttgtctgtttt tggtgcaccaaatccaattgtccatatatatttcaattcatgtttgtttt tgttttgttgtttgaatgattattgttctgtgtttcatgttaaaaaatat aaatggttaaaactgtatcttctggctgtccatcctttaactgtttataa gttagctgcactgtgctaggagctagtacagctgaaaagccttgctgagt cgattacaaatgaactcttaagggcagcagccttgccttgtaacagaaag tt	gaattctctgtttagatttgttctccattttgaatcacacttgttggttt tttttgttccctagttccttgacgtctgtattcagttttggatagtgttc ctttatcagatatggagttgttaaaaatcgttatgcattctgttcactgt tacattatttgattgaatgtatgctctgctttacagaaatatttcaattt catgaaatcacaaatattaattttttatagtgcctattctaatggtattc tgttcagaaagtcttctcctgtgccaagaagtttaaggctattaccacgt tctcttctaagaatcactttaattgtgtctgagtttatattgggatcact acccatttagattttaattgtgtactgggtgataaatatgaatctatttg cattttccttcatgtatacatcaattttctcaagcaccatttgttgaaga gcttttttttctattgtgcttttcatgattctttattaaaattcagatgt tcatttgttttgggatttatgtctcaggcttcactttgattcaattgatc aacatgtctgtttttaatgtgtctaccatgaagtttttagttttatcatt ttgagttgttgagcaactcaaaatcaggaatggtaataccagcagcaggt attattgttcagaaatcttttagctactctgaatttttgtttttgttttt cgatataaaaataagtagtgtcctgtcaatgtacataaagaattgtattg gaattttaatggggaccacattgaatctgtacattgcatttggtaggata gacaattttactatgtagatcctacagatccacgagcatgggcatctttc cattttctgaaaacttctcaatttctttcttcagaaacttgaagttcttg ccatacattggaaattcctttaacaacctagtttctttatcagccatgtg tatttctatataggaggactactgatttttttggggtaaacttttcttca gctacatttctgaaagtgtttattagcagtgaagtccctttagagaaaat tgttgactatgcatagtacaatcatctgcaaataaaggtactttgatctt gtctattggatcccctttatctcctacagtggcctattggctgctagaga cttacacatcgatatatacagaatagaagcaagcaccagccgtgctgatc ctgagattatgaaagtcgtcatattgagtct
quality values	Open. Hide. 47 47 43 40 61 55 61 61 55 47 61 61 38 19 49 61 61 61 47 47 61 61 61 61 19 18 12 13 18 22 28 37 59 49 41 30 44 44 55 59 61 61 61 61 59 59 59 61 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 39 59 37 35 28 49 41 61 59 55 55 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 57 57 57 47 53 45 57 57 53 53 50 57 57 57 53 57 47 57 57 57 57 57 53 53 47 47 47 53 57 53 53 53 57 57 53 50 53 47 53 53 47 53 53 47 53 52 53 57 57 45 57 53 32 57 57 43 53 52 42 51 40 57 57 57 52 53 53 50 57 45 46 46 57 57 57 47 43 45 57 57 57 38 57 53 57 42 57 50 57 57 57 36 45 45 47 45 52 57 57 35 39 34 57 41 57 53 45 50 53 37 47 53 43 52 46 20 27 33 42 57 42 57 52 53 57 57 35 35 50 45 51 46 53 53 40 52 28 46 57 57 57 57 53 53 53 40 53 57 57 57 42 47 50 53 39 57 57 29 34 37 35 29 53 52 40 53 57 53 36 36 22 57 21 44 53 37 42 37 36 37 39 57 53 53 26 33 21 37 53 33 18 53 33 57 57 44 30 45 57 51 40 31 39 28 34 31 31 53 37 40 40 32 14 16 40 44 44 32 34 29 29 53 27 37 33 53 30 31 30 40 36 31 22 31 28 33 36 51 33 31 31 32 16 31 47 30 32 30 47 27 28 22 10 37 29 21 35 29 39 48 41 29 44 26 14 45 29 19 47 44 29 48 22 35 25 18 16 23 16 35 23 31 29 38 28 29 29 28 35 28 28 28 29 24 30 26 31 27 28 23 29 14 33 36 21 29 26 43 29 51 51 51 34 40 29 26 29 21 17 26 46 17 51 29 29 36 29 23 26 28 29 32 21 36 38 23 29 29 29 28 29 29 30 46 43 28 22 17 29 33 27 19 28 41 16 46 24 20 12 51 44 42 36 41 18 36 36 23 36 9 15 40 18 51 25 28 27 29 22 28 29 17 16 20 17 20 38 10 20 27 16 34 18 34 24 51 9 20 21 24 38 12 23 28 51 44 51 36 9 5 7 24 20 51 28 21 22 33 20 30 23 44 35 25 12 13 22 8 12 18 30 25 28 20 17 27 31 23 33 33 31 24 19 13 18 22 20 25 44 20 12 17 18 30 14 7 33 7 9 20 28 27 24 22 15 29 23 29 25 29 22 12 9 13 26 4 6 3 4 10 21 15 23 5 13 3 14 12 17 8 29 11 28 15 29 11 25 35 32 25 5 7 9 5 8 13 16 8 5 4 4 1 7 10 18 5 17 10 11 5 26 14 11 10 4 4 9 14 14 6 21 15 7 18 28 18 4 6 23 10 6 6 12 4 4 2 5 6 5 16 7 13 8 10 6 6 4 4 17 23 4 6 7 14	Open. Hide. 61 61 55 49 41 37 36 50 18 50 52 43 32 32 30 59 59 59 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 37 44 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 61 59 55 59 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 39 61 61 61 61 61 61 61 61 53 61 61 47 61 61 57 47 47 57 57 57 57 57 57 57 57 57 57 57 45 57 53 46 57 57 57 57 57 57 53 53 57 52 39 57 53 57 53 53 57 53 57 57 53 53 53 57 57 57 53 50 53 57 57 53 47 57 47 26 47 39 47 53 47 32 36 53 57 53 47 57 45 38 52 45 45 37 36 50 37 53 52 24 30 47 47 23 57 57 57 53 50 47 57 57 47 50 34 53 38 35 53 52 53 53 53 46 50 24 57 57 57 57 52 38 46 57 57 46 37 24 57 57 57 53 39 30 52 30 43 45 42 57 57 57 23 32 32 41 28 50 53 30 38 52 28 50 53 52 57 32 33 33 31 36 53 36 28 52 31 43 38 57 46 38 53 40 23 44 53 35 34 39 33 57 23 52 53 36 57 46 44 34 40 36 53 57 57 37 38 23 39 20 37 21 53 40 47 53 35 36 40 32 40 29 27 40 24 32 45 45 35 27 22 57 38 41 40 29 40 13 30 29 16 40 39 31 27 21 46 26 51 51 47 32 39 36 32 30 48 31 41 29 29 29 22 16 16 26 26 24 29 30 27 14 44 19 29 34 48 29 33 12 28 23 46 45 22 23 29 29 29 51 32 23 43 18 30 46 51 36 29 24 27 28 51 51 27 24 22 23 14 33 7 15 18 30 46 17 22 32 46 27 29 28 29 21 14 8 28 43 14 15 20 20 29 32 31 27 26 35 27 6 27 29 13 26 18 28 20 28 14 29 17 32 23 36 51 23 29 12 23 27 23 39 32 28 24 24 21 15 23 19 28 27 17 39 51 13 22 21 51 29 16 15 21 6 8 6 18 13 21 29 28 29 15 8 17 51 17 28 21 27 18 13 11 20 9 19 27 23 12 25 14 27 28 28 27 28 28 28 51 44 51 42 44 17 20 38 38 12 18 6 32 20 30 27 51 51 27 26 15 27 27 8 6 18 17 19 22 13 33 35 19 9 13 17 31 42 17 6 5 5 5 42 16 8 5 22 13 12 13 8 28 8 23 20 23 13 9 23 31 15 8 21 17 12 9 23 8 26 37 37 17 3 4 6 3 4 12 17 4 6 10 22 29 22 12 14 8 13 4 4 5 5 6 4 6 9 5 7 5 9 13 24 32 8 3 6 31 8 24 23 11 11 7 10 26 9 16 19 12 22 4 3 1 2 3 4 3 3 10 3 3 4 5 10 27 35 14 8 31 10 6 7 9 11 18 12 8 7 5 14 5 3 3 6 5 6 7 6 10 10 10 4 12 3 8 14 9 20 8 6 6 11 5 8 8 5 6 8 6 10 6 6 1 1 4 1 20 13 4 12 4 20 4 10 18 5 6 8 19 7 3 4 5 4 11 3 6 5 3 11 4 14 5 6 4 4 12 3 5 5 3 4 4 11 4 5 5 3 17 3 10 4 14 6 4 4 4 4 10 6 6 5 6 4 7 14 9 6 3 3 3 6 3

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_78930279_78931441
seq2: B6Ng01-168B15.b_45_1196

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  CAATTCCAGATTTCTTTACACATAAGATGGAATGGTCCAGCAGCTAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCAGATTTCTTTACACATAAGATGGAATGGTCCAGCAGCTAGGTC  100

seq1  CACTGTCACAGACTTTAATTCCGTTCAATTGATATGTCGCCTCATGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCACAGACTTTAATTCCGTTCAATTGATATGTCGCCTCATGGGAG  150

seq1  AAACTGAAAGGAGATCTAGTTAGGGAACAGCAGAACGGCAAACTTAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAAGGAGATCTAGTTAGGGAACAGCAGAACGGCAAACTTAAAGC  200

seq1  AGGGACCATGCCGTTGTAGAAGCTGGTGAGGTGGGACAGAATATTCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCATGCCGTTGTAGAAGCTGGTGAGGTGGGACAGAATATTCTGGA  250

seq1  CGAAATTCAAGACAGTCTATCAGAGGCAGAGCGGGGAGAGAGAGTAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATTCAAGACAGTCTATCAGAGGCAGAGCGGGGAGAGAGAGTAAGAA  300

seq1  TTGAAACGAAACAAGGTGCACTCAAGAATAAAGGCCTTTCCACGGACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACGAAACAAGGTGCACTCAAGAATAAAGGCCTTTCCACGGACCTT  350

seq1  GAGCCCGAGGAAAAGATAATGTAGGGAAAGAATGCCCGGGGTGAGTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCGAGGAAAAGATAATGTAGGGAAAGAATGCCCGGGGTGAGTTTAG  400

seq1  AAAAGGAGAAAAGAGAAAAACAAAGGCTAATATAAAATATAAAGATATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGAAAAGAGAAAAACAAAGGCTAATATAAAATATAAAGATATAA  450

seq1  AGGATAATATAAAATATAAAGATACAAAGGATAATATAAAATATAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAATATAAAATATAAAGATACAAAGGATAATATAAAATATAAAGAT  500

seq1  ACAAAGGATAATATAAATTAAGTCAATTTACCCTCCTCTCGAGGACTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGATAATATAAATTAAGTCAATTTACCCTCCTCTCGAGGACTTTG  550

seq1  ACTATTGAGGCAGCCTTCATTAAAGGCTTAAACTTAGCTCTCAGGGCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGAGGCAGCCTTCATTAAAGGCTTAAACTTAGCTCTCAGGGCCAC  600

seq1  TGTGCCTCCTTTCCATTCTCTGGCAGTATTCCCAGAAGAAGGAGATAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTCCTTTCCATTCTCTGGCAGTATTCCCAGAAGAAGGAGATAAGG  650

seq1  AAGTAGAGTCTGAACATGAGAGAGAGAAAATACGTTTTAGGAAAGCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGTCTGAACATGAGAGAGAGAAAATACGTTTTAGGAAAGCAGTT  700

seq1  ATCCCCTGTTTGGGATCTTTTAGCAAAAAAAGAGAAAAAATGAAAATAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTGTTTGGGATCTTTTAGCAAAAAAAGAGAAAAAATGAAAATAAG  750

seq1  CTATTTCAGAGCTCTCCTGGGAACAGAAGGAAAATGGGAGACGTCCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCAGAGCTCTCCTGGGAACAGAAGGAAAATGGGAGACGTCCTACT  800

seq1  TCCTCTCTGGCTCCTATGGAGATATTCTTAGCTCTGGTTAGGATATCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTGGCTCCTATGGAGATATTCTTAGCTCTGGTTAGGATATCTGT  850

seq1  GTCCCTTTGAGACACCAAGTTCTCTTCACTGTCTGTCTGTTGTCTGTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTGAGACACCAAGTTCTCTTCACTGTCTGTCTGTTGTCTGTTTT  900

seq1  TGGTGCACCAAATCCAATTGTCCATATATATTTCAATTCATGTTTGTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACCAAATCCAATTGTCCATATATATTTCAATTCATGTTTGTTTT  950

seq1  TGTTTTGTTGTTTGAATGATTATTGTTCTGTGTTTCATGTTAAAAAATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTGTTTGAATGATTATTGTTCTGTGTTTCATGTTAAAAAATAT  1000

seq1  AAATGGTTAAAACTGTATCTTCTGGCTGTCCATCCTTTAACTTGTTTATA  1050
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAATGGTTAAAACTGTATCTTCTGGCTGTCCATCCTTTAAC-TGTTTATA  1049

seq1  AGTTAGCTGCACTGTGGCTAGGAGCCAAGTACAGCTGAAAAAGCCCTGCT  1100
      ||||||||||||||| |||||||| | |||||||||| ||||||| ||||
seq2  AGTTAGCTGCACTGT-GCTAGGAG-CTAGTACAGCTG-AAAAGCCTTGCT  1096

seq1  GAGGGCCGATTACAAATGGAACTCTTAAAGGGGCAGGCAGCCTTTTGCTT  1150
      ||  | ||||||||||| ||||||||||  ||||| |||||| ||  |||
seq2  GA--GTCGATTACAAAT-GAACTCTTAA--GGGCA-GCAGCC-TTGCCTT  1139

seq1  GTAACAGAAAGTT  1163
      |||||||||||||
seq2  GTAACAGAAAGTT  1152

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Alignment Information