BAC Information

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BAC

Clone NameB6Ng01-172D02
ChromosomeX (Build37)
Map Location 41,694,081 - 41,694,669
singlet/doubletsinglet
Overlap genenone
Upstream geneGm362, LOC100039977, LOC100039987, LOC637141
Downstream geneWdr40c, Wdr40b, LOC665585, 1110059M19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172D02.bB6Ng01-172D02.g
ACCGA000876GA000877
length701,164
definitionB6Ng01-172D02.b B6Ng01-172D02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttttttttttttttttttttttttttgtttttttttttgtttt
tttttttgtttttttttttt
gaattctgtagctccagctagaaatatttcaaattattgtttctaaaagc
aatcagtaaagtagaataaaatagagatcactctaataaattaagaaaac
cattcatggtcttaattattaattcaaaaatgacattgaaaacaataaac
agaaacagaaattggagagcacaaaaacttgagtcaaataaaaatcgaga
aacttgggagcagatgaccttaaacaggaaaataattttttttaatttga
aaaaagtgctcttgaaagaaatctgaaatgagtgataatagcctctgaga
aatacagtgcagcataattccaaaaatatttgaagtttaggtccatgtaa
aagagagaggaaataaaacatagggaatatatttaatgaaataatagttg
aacattttctcaaaagataagcacatataaatataagaggtttaaagcac
ccttactccccaaatagtttttttatctcaaaaaggtccattgtgagata
gatttaactcaaactgtcaaaagtggaaagcaagaaatttctaaaaacag
tgagagaaaagtaccaggcacatttaaaggaaccttccattagactaatg
acaagttttaagcagagacattattgcccaggagaaaatgggtgacattt
tcaaattcctgaagttaaaaataaactgcaagctgccaaccaagaatgct
aaatccagcaatgacatactttagacgtgaatgataaataacatatttct
aagagaagcaaaaactgggggaattaattatcatttgaatggccttacaa
tggatatttaagcatttgtacaaagagcagaatgaaagataatttccacc
tttaaactacatgaaactatgaactctaccaatagtgtgctctaagaata
tgaaagtcaaaattaaaacttatgaataaagaaaattatcaaattcagaa
tcacatagaagtataaaggacatacaaaaaaaacagaaaatacaaatcct
agatagtatataaaacaataatatatttagatgaacttgctgatacatat
ctgagcaccattatacacaaagtagatcaatgaagccacatccgagcaga
ttcaaggagtaacgaaagttttgctttttatagaaccgctggagactgta
atcagctaattgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_41694081_41694669
seq2: B6Ng01-172D02.g_655_1229

seq1  TTAGACTAATGACAAGTTTTAAGCAGAGACATTATTGCCCAGGAGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTAATGACAAGTTTTAAGCAGAGACATTATTGCCCAGGAGAAAAT  50

seq1  GGGTGACATTTTCAAATTCCTGAAGTTAAAAATAAACTGCAAGCTGCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACATTTTCAAATTCCTGAAGTTAAAAATAAACTGCAAGCTGCCAA  100

seq1  CCAAGAATGCTAAATCCAGCAATGACATACTTTAGACGTGAATGATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATGCTAAATCCAGCAATGACATACTTTAGACGTGAATGATAAAT  150

seq1  AACATATTTCTAAGAGAAGCAAAAACTGGGGGAATTAATTATCATTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTTCTAAGAGAAGCAAAAACTGGGGGAATTAATTATCATTTGAA  200

seq1  TGGCCTTACAATGGATATTTAAGCATTTGTACAAAGAGCAGAATGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTACAATGGATATTTAAGCATTTGTACAAAGAGCAGAATGAAAGA  250

seq1  TAATTTCCACCTTTAAACTACATGAAACTATGAACTCTACCAATAGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCCACCTTTAAACTACATGAAACTATGAACTCTACCAATAGTGTG  300

seq1  CTCTAAGAATATGAAAGTCAAAATTAAAACTTATGAATAAAGAAAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGAATATGAAAGTCAAAATTAAAACTTATGAATAAAGAAAATTAT  350

seq1  CAAATTCAAGAATCACATAGAAGTAATAAAGGACATACAAAAAAAACAGA  400
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  CAAATTC-AGAATCACATAGAAGT-ATAAAGGACATACAAAAAAAACAGA  398

seq1  AAATAACAAATCCTAGGAATAAGTATTATAAAAC-ATAATATAATTAGAT  449
      |||| |||||||||||  || |||| |||||||| |||||||| ||||||
seq2  AAAT-ACAAATCCTAG--AT-AGTA-TATAAAACAATAATATATTTAGAT  443

seq1  GAAACTTGCTGATTACATTATCTGAGCACAATTAATACAACAAAAATTAG  499
      | |||||||||| |||| ||||||||||| ||||     ||| ||| |||
seq2  G-AACTTGCTGA-TACA-TATCTGAGCACCATTA----TACACAAAGTAG  486

seq1  AATCAATGAAGCCACATCAGAGGCAGATCCAAAGAGTACAGAAGTTTTTT  549
       ||||||||||||||||| || |||||| ||| |||||  |||   ||||
seq2  -ATCAATGAAGCCACATCCGA-GCAGATTCAAGGAGTAACGAA-AGTTTT  533

seq1  GCTTTTTATAG-ACAGGT-GAGACTGTGAATCAG-TAATTGTG  589
      ||||||||||| || | | |||||||| |||||| ||||||||
seq2  GCTTTTTATAGAACCGCTGGAGACTGT-AATCAGCTAATTGTG  575