BAC Information

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BAC

Clone NameB6Ng01-172E02
ChromosomeX (Build37)
Map Location 46,431,282 - 46,432,422
singlet/doubletsinglet
Overlap geneEnox2
Upstream geneXpnpep2, 1200013B08Rik, Zdhhc9, Utp14a, LOC637576, Bcorl1, Elf4, Aifm1, Rab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295
Downstream gene1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344, Olfr1323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172E02.bB6Ng01-172E02.g
ACCGA000922GA000923
length1,180900
definitionB6Ng01-172E02.b B6Ng01-172E02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggcaaaacactcttgcagagaatttgtttaagaggagatcc
tgtcctgccatcactgttaatgttattgaataggagttgcacaaaacatc
atggtagatgaaagcagctccactccaaacctacaatggattcccacttg
aagcttctaattatgctagttattattttcaatgacaagtgtatgttcaa
caataccattcatgacagtggagatctgaactcccaggggaataccaaaa
gacattatgtatcatttgtttgtcatctatgacaaagtatattctattgc
cataggcaggccacatcaggcaggccaaagaacagtctactggttcagca
gaaaactgcccgaaaggcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaggctacattgctaagccatcaataaaggtactttggagaatag
ctgcaggagggtcatttttaataagcatataataatcacacaaaataatg
gttttcatcatgatatttccatacatgtatacatgtatatgatttattta
tacactttaccacatttcctatccctttcccctcacattggctccctgcc
tagagggtttagatgatttagagtaaatcatagaggttactctaaaactg
taccaagatggtagatactctcccccctagaccttgacaagcagtaaggt
aggcagcattcactggacatgcttgtgtgaatgtgaaatgcccttcacag
gtcaagttggtggcactactgtggaaatgtctgaaacctttaaggactga
ctgcagacataatgtgagaaaacagttcatctgcttccaccatgcatttc
ctgtcatgataaaaagacttttcttaagctgtaagctgcagggcaagtgg
gggaaggatcaatgattgcagtctccagccctaaggacagaaagaaaagc
ttggaagctttccttagaagaaatcttggtgcttaagaaccccataatta
aaagacttaaccgcagcaggaattctgatgagctggattgccaaaagtat
gaagatacacctgactttcaaaagggattgcacctgttcatttttctgtt
tttttctacttttatttcattctggccattggttctgttctacattaacc
tatgggatccttacccctcctcagttgctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaacccctgatc
ttccacctcacaccagtcagactggctaagatcaaaaattcaggtgacag
cagatgctagtgaggatgtggagaaagagaaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggtttctc
agaaaattggacatagtactaccagaggatcaagaagtatctctcctggg
catatatccagaagatgttccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatatacagaagctggaaaagaacccag
atgtccctcaacagaggaatggatacagaaaatgtggtacatttacacaa
tggagtactattcaactattaaaaagaatgaatttatgaaattcctaggc
aaatggatggacctggaggtcatcctcctgagtgagataacccaatcaca
aaagaactcacatgatatgtactcactgataagtggatatttagccccag
aaacttagaaataccccaagatacaatatacgatctgcaaacatcatgaa
actcagaagaaacgaaagaccaggaatgtggacactttggccccttctta
gaaactgggaacaaaacacccatggaaggattacaagaataaagttgagc
tgaaatgacagattaccatcctaaagcactgcataccaggaattcatctc
gatataccagcctcgacactgaaccaatttgccatacactagaagtcttg
tctagagtacccatagactgttctcttgtagagctatgctgcttacacac

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_46431282_46432422
seq2: B6Ng01-172E02.b_46_1225

seq1  GAATTCTTTGGCAAAACACTCTTGCAGAGAATTTGTTTAAGAGGAGATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCAAAACACTCTTGCAGAGAATTTGTTTAAGAGGAGATCC  50

seq1  TGTCCTGCCATCACTGTTAATGTTATTGAATAGGAGTTGCACAAAACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGCCATCACTGTTAATGTTATTGAATAGGAGTTGCACAAAACATC  100

seq1  ATGGTAGATGAAAGCAGCTCCACTCCAAACCTACAATGGATTCCCACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGATGAAAGCAGCTCCACTCCAAACCTACAATGGATTCCCACTTG  150

seq1  AAGCTTCTAATTATGCTAGTTATTATTTTCAATGACAAGTGTATGTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTAATTATGCTAGTTATTATTTTCAATGACAAGTGTATGTTCAA  200

seq1  CAATACCATTCATGACAGTGGAGATCTGAACTCCCAGGGGAATACCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCATTCATGACAGTGGAGATCTGAACTCCCAGGGGAATACCAAAA  250

seq1  GACATTATGTATCATTTGTTTGTCATCTATGACAAAGTATATTCTATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTATGTATCATTTGTTTGTCATCTATGACAAAGTATATTCTATTGC  300

seq1  CATAGGCAGGCCACATCAGGCAGGCCAAAGAACAGTCTACTGGTTCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCAGGCCACATCAGGCAGGCCAAAGAACAGTCTACTGGTTCAGCA  350

seq1  GAAAACTGCCCGAAAGGC-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  399
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAAAACTGCCCGAAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  400

seq1  AAAAAAAGGCTACATTGCTAAGCCATCAATAAAGGTACTTTGGAGAATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGCTACATTGCTAAGCCATCAATAAAGGTACTTTGGAGAATAG  450

seq1  CTGCAGGAGGGTCATTTTTAATAAGCATATAATAATCACACAAAATAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGAGGGTCATTTTTAATAAGCATATAATAATCACACAAAATAATG  500

seq1  GTTTTCATCATGATATTTCCATACATGTATACATGTATATGATTTATTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATCATGATATTTCCATACATGTATACATGTATATGATTTATTTA  550

seq1  TACACTTTACCACATTTCCTATCCCTTTCCCCTCACATTGGCTCCCTGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTACCACATTTCCTATCCCTTTCCCCTCACATTGGCTCCCTGCC  600

seq1  TAGAGGGTTTAGATGATTTAGAGTAAATCATAGAGGTTACTCTAAAACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGTTTAGATGATTTAGAGTAAATCATAGAGGTTACTCTAAAACTG  650

seq1  TACCAAGATGGTAGATACTCTCCCCCCTAGACCTTGACAAGCAGTAAGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGATGGTAGATACTCTCCCCCCTAGACCTTGACAAGCAGTAAGGT  700

seq1  AGGCAGCATTCACTGGACATGCTTGTGTGAATGTGAAATGCCCTTCACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCATTCACTGGACATGCTTGTGTGAATGTGAAATGCCCTTCACAG  750

seq1  GTCAAGTTGGTGGCACTACTGTGGAAATGTCTGAAACCTTTAAGGACTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTGGTGGCACTACTGTGGAAATGTCTGAAACCTTTAAGGACTGA  800

seq1  CTGCAGACATAATGTGAGAAAACAGTTCATCTGCTTCCACCATGCATTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGACATAATGTGAGAAAACAGTTCATCTGCTTCCACCATGCATTTC  850

seq1  CTGTCATGAT-AATAGAC-TTTCTTAAGCTGTAAGCTGCAGGGCAAGTGG  897
      |||||||||| || |||| |||||||||||||||||||||||||||||||
seq2  CTGTCATGATAAAAAGACTTTTCTTAAGCTGTAAGCTGCAGGGCAAGTGG  900

seq1  GG--AGGATCAATGA-TGCAGTC-CCAG-CCTAA-GACAGAA--GAGAGC  939
      ||  ||||||||||| ||||||| |||| ||||| |||||||   | |||
seq2  GGGAAGGATCAATGATTGCAGTCTCCAGCCCTAAGGACAGAAAGAAAAGC  950

seq1  -TGGAAGCTT--CCTAGA--GAATCT--GTGC-TAAGAA-CCCAT-ATTA  979
       |||||||||  | ||||   |||||  |||| |||||| ||||| ||||
seq2  TTGGAAGCTTTCCTTAGAAGAAATCTTGGTGCTTAAGAACCCCATAATTA  1000

seq1  AAAGACT--AACGCAGCAGG-ATTCTGATGAGCT-GAT--GCAAAAGTAT  1023
      |||||||  | ||||||||| ||||||||||||| |||   |||||||||
seq2  AAAGACTTAACCGCAGCAGGAATTCTGATGAGCTGGATTGCCAAAAGTAT  1050

seq1  G-AGATACA-CTGAC-TCAAAAAGGGAATTTGCACCTGTTCA-TTTTCTG  1069
      | ||||||| ||||| |  ||||||||  ||||||||||||| |||||||
seq2  GAAGATACACCTGACTTTCAAAAGGGA--TTGCACCTGTTCATTTTTCTG  1098

seq1  --TTTTTCTACTTTTATTTCA-TCTGG-CAATGGTTCTG-TCTACATTTA  1114
        ||||||||||||||||||| ||||| || |||||||| |||||||| |
seq2  TTTTTTTCTACTTTTATTTCATTCTGGCCATTGGTTCTGTTCTACATTAA  1148

seq1  -CTAT-GGATCTTT---CCTCCTCAGTTGCTC  1141
       |||| ||||| ||   |||||||||||||||
seq2  CCTATGGGATCCTTACCCCTCCTCAGTTGCTC  1180