MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-174P24
Chromosome	X (Build37)
Map Location	14,165,571 - 14,166,130
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cask, Gpr34, Gpr82, LOC385327, EG385328
Downstream gene	LOC668991, 4930403L05Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cask (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12361 MGI:1309489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23890 MGI:1346334
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr82 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319200 MGI:2441734
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC385327 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385327
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	EG385328 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:385328 MGI:3643774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668991 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	4930403L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67395 MGI:1914645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cask (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133504494 GeneID:12361 MGI:1309489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium/calmodulin-dependent serine protein kinase (MAGUK family) transcript_id : NM_009806.2

name	Gpr34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358042 GeneID:23890 MGI:1346334
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 34 transcript_id : NM_011823.3

name	Gpr82 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802746 GeneID:319200 MGI:2441734
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 82 transcript_id : NM_175669.3

name	EG385328 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77539461 GeneID:385328 MGI:3643774
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG385328 transcript_id : NM_001034100.1

name	4930403L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383460 GeneID:67395 MGI:1914645
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930403L05 gene transcript_id : NM_026128.2

name	Cask (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133504495 GeneID:12361 MGI:1309489
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0005829 - cytosol [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IDA]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : calcium/calmodulin-dependent serine protein kinase protein_id : NP_033936.2

name	Gpr34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560528 CCDS:CCDS30028.1 GeneID:23890 MGI:1346334
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G-protein-coupled receptor product : G protein-coupled receptor 34 protein_id : NP_035953.2

name	Gpr82 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316782 CCDS:CCDS30029.1 GeneID:319200 MGI:2441734
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor GPR82 product : G protein-coupled receptor 82 protein_id : NP_783600.1

name	EG385328 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77539462 GeneID:385328 MGI:3643774
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 note : novel protein similar to histone 1, H2a Hist1h2a product : hypothetical protein LOC385328 protein_id : NP_001029272.1

name	4930403L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385638 CCDS:CCDS30031.1 GeneID:67395 MGI:1914645
definition	GO_function : GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] GO_process : GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : novel gene similar to protein phosphatase 1 regulatory subunit 2 Ppp1r2 product : type 1 protein phosphatase inhibitor protein_id : NP_080404.1

name	LOC385327 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385327
definition	number : 3 pseudo : _no_value

name	LOC385327 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385327
definition	number : 2 pseudo : _no_value

name	LOC385327 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385327
definition	number : 1 pseudo : _no_value

name	LOC668991 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270997 GeneID:668991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to ribosomal protein L6 pseudo : _no_value transcript_id : XR_033255.1

clone name	MSMg01-527G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167O06
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-102I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-174P24.b	B6Ng01-174P24.g
ACC	GA002923	GA002924
length	795	659
definition	B6Ng01-174P24.b	B6Ng01-174P24.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaatggggttatttgatt ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg tctacttgtctgtctctataccagtaccatgcagtttttatcacaatttg ctctgtagtaaagctttaggtctggcatggtgattcccgccagaagttct tttatccttgagaagacttttttgctatcctaggttttttgttattccag acaaatttggcaaattggctccttccaattcgttgaagaaattgagtttg gaattttggatggggattgcattgaattctgtagattgcttttgg	gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacattgatggattttcatatattaaacc atccctgcatccatggaataaaacctacttggtcaggatggatgatttct ttaatatgttcttcgattcggttagcgagaattttattgaggatttttgc atcgatattcataagagaaaggggtctgaggttctctatctttgatggat ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg gtcctgggctttttttggctgggagactatttataactgcttctattttt taggggaaatgggactgtttagaaggtcaacttgatcctgattcaacttt ggtacctggtatctgtccagaaaatttgtccattttcgtccaggttttcc agtttttgttgagtatagccttttgtagaaggatctgatggtgtttttgg attttcttc
quality values	Open. Hide. 52 29 27 22 58 58 54 58 58 47 42 62 27 14 47 62 62 62 47 47 62 62 62 62 62 47 44 62 62 62 62 62 59 16 13 9 10 10 10 7 8 10 13 7 10 10 14 13 59 62 62 62 62 62 59 62 59 59 62 62 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 15 15 12 11 8 13 10 10 8 10 10 18 10 10 12 10 43 56 62 62 54 54 62 59 62 62 62 62 62 62 62 62 62 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 54 28 43 28 40 31 32 34 34 56 62 62 62 62 62 62 62 59 59 50 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 56 59 59 59 62 59 62 62 59 62 62 62 59 62 62 59 59 59 62 62 59 59 56 59 59 59 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 59 59 50 30 30 18 25 13 28 28 27 34 46 50 62 62 62 59 59 56 62 62 59 62 62 62 62 50 56 17 24 24 18 23 28 38 39 25 28 56 56 50 32 31 35 59 59 62 62 62 62 62 59 59 59 59 59 59 59 59 59 62 62 62 59 62 62 59 39 62 59 59 59 56 62 59 59 59 59 59 34 43 11 28 13 34 44 12 56 44 59 59 59 59 59 62 25 17 24 9 19 19 45 59 56 59 56 62 62 62 62 62 44 59 62 62 62 62 54 56 56 62 62 62 51 56 47 47 44 51 56 56 54 56 56 56 47 62 62 56 42 51 56 56 51 51 56 56 56 51 56 56 56 56 56 56 62 47 47 62 56 62 39 47 42 47 39 42 42 56 26 29 20 13 22 30 56 43 46 42 56 52 62 62 47 31 38 35 35 35 38 50 38 15 41 42 35 42 31 35 23 27 27 43 46 52 47 43 50 46 37 54 42 20 58 41 39 53 42 29 21 33 46 52 19 12 22 14 25 26 16 17 18 9 18 20 19 19 52 44 12 13 54 41 42 52 52 52 37 31 31 19 20 28 39 31 11 36 48 42 31 10 22 47 37 50 52 26 45 43 54 42 51 32 50 50 30 12 45 34 48 50 51 50 50 47 24 53 22 18 50 35 22 16 16 19 9 7 24 29 19 27 19 8 13 11 10 19 17 46 35 19 19 25 41 28 27 21 50 25 20 17 37 40 39 37 21 16 26 32 30 22 9 27 25 11 22 16 31 47 28 37 40 32 50 36 28 20 24 35 35 17 25 13 39 42 32 26 32 28 53 32 39 37 7 16 19 12 13 19 12 7 16 18 31 31 32 16 9 27 22 9 26 29 29 17 31 22 12 6	Open. Hide. 62 47 47 37 62 62 62 62 62 47 41 56 56 15 8 27 21 8 11 12 12 10 8 10 10 9 10 11 22 22 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 54 62 24 14 14 10 10 12 13 7 10 18 10 10 7 9 10 10 18 48 62 59 62 62 54 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 62 62 54 54 59 62 62 62 59 62 62 59 59 50 42 35 54 34 46 46 28 31 32 32 32 54 62 62 62 59 62 62 59 59 62 59 48 43 59 59 50 50 56 48 54 62 62 62 62 62 62 62 59 59 56 56 56 62 54 54 54 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 54 54 56 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 59 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 59 62 59 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 46 62 56 56 56 59 59 62 59 62 62 62 62 62 62 62 56 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 51 51 34 30 34 25 18 13 34 28 29 50 56 50 56 51 59 46 48 30 48 54 56 56 62 62 62 51 24 23 23 11 18 23 19 18 25 34 56 43 36 39 56 56 50 56 56 59 56 43 56 59 30 30 17 20 25 23 59 51 62 62 62 59 59 59 62 59 59 62 59 62 59 62 62 62 62 62 62 62 56 56 44 56 62 56 56 62 44 54 62 56 56 62 62 62 62 62 56 62 56 62 62 56 56 62 47 47 51 62 47 47 62 56 62 56 42 54 56 56 62 56 56 56 62 56 51 54 41 47 62 50 56 47 42 43 56 56 46 62 39 43 43 43 50 50 47 56 43 56 56 56 56 56 47 33 47 52 46 50 52 52 42 42 52 50 24 22 33 27 27 42 43 35 32 33 38 43 43 35 39 35 43 35 46 54 52 42 46 35 42 37 26 35 32 32 35 29 46 39 46 17 12 21 32 28 24 21 25 33 47 28 26 50 37 39 34 50 50 50 29 32 41 46 50 49 46 50 24 39 37 35 37 29 22 54 52 35 24 13 10 10 19 41 32 52 18 13 18 17 21 32 50 34 28 15 47 35 25 27 27 27 32 26 26 34 25 27 26 23 18 24 18

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_14165571_14166130
seq2: B6Ng01-174P24.g_162_725 (reverse)

seq1  GAAG-AAATCC-AAAACACCATCAGATCCTTCTACAAAAGGCTATACTCA  48
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATCCAAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCA  50

seq1  AC-AAAACTGGAAAACCTGGACG-AAATGGACAAA-TTTCTGGACAGATA  95
      || |||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  ACAAAAACTGGAAAACCTGGACGAAAATGGACAAATTTTCTGGACAGATA  100

seq1  CCAGGTACCAAAGTTGAATTAGGATCAAGTTGACCTTCTAAACAGTCCCA  145
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCA  150

seq1  TATCCCCTAAAGAAATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAA  195
      | ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTAAA-AAATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAA  199

seq1  AGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGA  249

seq1  AGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAG  295
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  AGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAG  299

seq1  GTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  349

seq1  CCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTAT  395
      ||||||||||||||| |||||||||||||| |||||||  ||||||||||
seq2  CCACAGAAAGATCCATCAAAGATAGAGAACCTCAGACCCCTTTCTCTTAT  399

seq1  GAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAG  445
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCGAAG  449

seq1  AACACATTAAAGCAATCATCCATCCTGACCAAGTAGTTTTTATTCCAGGG  495
      |||| ||||||| ||||||||||||||||||||||| |||||||||| ||
seq2  AACATATTAAAGAAATCATCCATCCTGACCAAGTAGGTTTTATTCCATGG  499

seq1  ATGCAGGGATGGTTTAATATATGAAAATCCATCAATGTAATCCACTATAT  545
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGCAGGGATGGTTTAATATATGAAAATCCATCAATGTAATCCATTATAT  549

seq1  AAACAAACTCAAAGA  560
      |||||||||||||||
seq2  AAACAAACTCAAAGA  564

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Alignment Information