BAC Information

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BAC

Clone NameB6Ng01-175E08
ChromosomeX (Build37)
Map Location 18,301,828 - 18,303,049
singlet/doubletsinglet
Overlap genenone
Upstream geneEG436196, EG331391, Dusp21, LOC100043951, Utx, LOC100043952, 4930578C19Rik
Downstream geneLOC100043098, EG628855, LOC385333, EG628871, LOC100043953, BC049702, LOC675558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175E08.bB6Ng01-175E08.g
ACCGA003119GA003120
length1,2321,042
definitionB6Ng01-175E08.b B6Ng01-175E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcaatgctacatttcctaacttgaaaatggtgtgtgactata
cagaaagaaaaatgtttttatttttatgccatgatattaaagtatttgca
caaaaaagtgacatgacctttgcaactaactatgagaaaatgtcacaaaa
tcttaacaatgggtaaatgtacttataggtgtccatcaacatacccatta
taatacccattggaactctctttcctttgacaactttccaaagagttttt
acaaaacaagagatatttttaaaaacaaaggaagaaacctggtttgtact
attctacaaaagaggttctatagttcacacttccctaacctgtacaatgg
cctgttttccatccacaatacaacaaataaaaggaggaagaaccatttca
aaagactatgatgctcaatattctgtaaaatgagcatcttctggaaggtg
attttttttttctctgtgcccagttactatttggtaccactttgggtatc
tactgtacatgtctcttcttgagatttttctgaatgcctctttggttact
tctcttcattttctgtaaaaaaaatgatctccacccagtccatcattcac
cttcctctatcaatgttgtctaaaacctgagagatgctggcaagcatcct
ctgcttctactaagctcacatgaaaagagaaaattagtggagctaatagg
aatttgcttgtgaatataagaaaggactttaaatattctctccccaacct
acccttcacagttaaaaataagcagggctgtacataatgacacatgcttt
aatctcagcctaacaaggtacaacgaggtagatctctgtgaattcaaatc
aatcctgatctacatagtgagttccagaaaagtcagaactatgtaaagaa
ctatgcatcaaaaacaaataacaaaaatgacagtaatgtcctattgatga
gacagcacctatacaacttactgaacgtggagaagtttagctgctaccta
gattatgtcttcagcccttcagactatgggtcatagtactagagattatc
ctgcattctagcaaagaataaagatgaacctccacttatgttcatatagc
agctttatttataatagccagtagatgggaaagaacccagatgttccttc
aacagattgaaatggatacgaatgcgaatatttaccacattgaatactaa
ctctcagcccaaattaaaaaacacaaggaatt

gaattctttgtttagctctgagcttcatttttttaagggggttatttggt
tttctggagtccaccttcttgagttctttatatatatattggatattagt
cacctatctgatttaggataggtaaagatcctttcccaatctgttggtgg
cctttttgtcttattgatggtgtcttttgccttacagaagctttgcaatt
ttatgaggtcctatatgtcgattctcgatcttacagcacaagccattgct
gttctattcaggaatttttcctctgtatccatatcttctaggctttcccc
cactttctcctttttaagattcagtgtctctggttttatgtggagttcct
taatccacttagatttgaccttggtacaaggagataggaatggatcaatt
cacattcttctgcatgataaccaccacttgtgccagcaccatttgttgaa
aatgctgtctttttccactggataattttagctcccttgccaaaggtcaa
gtgaccatgggtgtgtgggttcatttctgggtcttcaattctcttccatt
ggtctacttgtctgttgctataccagtaccatgcagtttttataacaatt
gctctgtagtacagctttaggtcaggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctaagtttttttgttattctag
atgaatttgaagattgtccattctaattagttgaagatttgagttggaat
tttgatggggattgcattgaatctgtagattgcttttggcaagatagcca
tttttactatattgatcctgccaatccatgagcatgggagatctttccat
ctctgagatcttctttaattttctttctcagagtcttgaactcttatcat
acagaatctttcacttcccttagttagagtcacacaaaaggtattttata
tattttgtgactattgagaagggtattgtatccctaaattttgcctccag
ccttgtttatcccttgtgtagaagaaaggccatgaccttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_18301828_18303049
seq2: B6Ng01-175E08.b_45_1276 (reverse)

seq1  AATTCCTTG---TTTTTAATT---GCTGAG---TAGTACTCCATTGTGTA  41
      |||||||||   |||||||||   ||||||   ||||| || ||   |||
seq2  AATTCCTTGTGTTTTTTAATTTGGGCTGAGAGTTAGTATTCAATGTGGTA  50

seq1  AATATTCCGCATTTTCTGTATCCATT--CATCTGTTGAAGG-ACATCTGG  88
      |||||| ||||||    |||||||||   |||||||||||| ||||||||
seq2  AATATT-CGCATT---CGTATCCATTTCAATCTGTTGAAGGAACATCTGG  96

seq1  GTTCTTT-CCATCTACTGGCTATTATAAATAAAGCTGC--TATGAACAT-  134
      ||||||| ||||||||||||||||||||||||||||||  ||||||||| 
seq2  GTTCTTTCCCATCTACTGGCTATTATAAATAAAGCTGCTATATGAACATA  146

seq1  AGTGGA-GTTCATCTTTATTCTTTGCTAGAATGCAGGATATCTTCTAGTA  183
      |||||| |||||||||||||||||||||||||||||||||   |||||||
seq2  AGTGGAGGTTCATCTTTATTCTTTGCTAGAATGCAGGATAATCTCTAGTA  196

seq1  CTATGACCATTAGTCTGAAGGGCTGAAGACATAATCTAGGTAGCAGCTAA  233
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  CTATGACCCATAGTCTGAAGGGCTGAAGACATAATCTAGGTAGCAGCTAA  246

seq1  ACTTCTCCACGTTCAGTAAGTTGTATAGGTGCTGTCTTCATCAATAGGAC  283
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACTTCTCCACGTTCAGTAAGTTGTATAGGTGCTGTC-TCATCAATAGGAC  295

seq1  ATTACTGTCATTTTTTGTTTATTTGTTTTTGATGCATAGTTCTTTACATA  333
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  ATTACTGTCATTTTT--GTTATTTGTTTTTGATGCATAGTTCTTTACATA  343

seq1  GTTCTGACTTTTCTGGAACTCACTATGTAGATCAGGATTGATTTGAATTC  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGACTTTTCTGGAACTCACTATGTAGATCAGGATTGATTTGAATTC  393

seq1  ACAGAGATCTACCTCGTTGTACCTTGTTAGGCTGAGATTAAAGCATGTGT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATCTACCTCGTTGTACCTTGTTAGGCTGAGATTAAAGCATGTGT  443

seq1  CATTATGTACAGCCCTGCTTATTTTTAACTGTGAAGGGTAGGTTGGGGAG  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGTACAGCCCTGCTTATTTTTAACTGTGAAGGGTAGGTTGGGGAG  493

seq1  AGAATATTTAAAGTCCTTTCTTATATTCACAAGCAAATTCCTATTAGCTC  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTAAAGTCCTTTCTTATATTCACAAGCAAATTCCTATTAGCTC  543

seq1  CACTAATTTTCTCTTTTCATGTGAGCTTAGTAGAAGCAGAGGATGCTTGC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATTTTCTCTTTTCATGTGAGCTTAGTAGAAGCAGAGGATGCTTGC  593

seq1  CAGCATCTCTCAGGTTTTAGACAACATTGATAGAGGAAGGTGAATGATGG  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTCTCAGGTTTTAGACAACATTGATAGAGGAAGGTGAATGATGG  643

seq1  ACTGGGTGGAGATCATTTTTTTTACAGAAAATGAAGAGAAGTAACCAAAG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGGAGATCATTTTTTTTACAGAAAATGAAGAGAAGTAACCAAAG  693

seq1  AGGCATTCAGAAAAATCTCAAGAAGAGACATGTACAGTAGATACCCAAAG  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTCAGAAAAATCTCAAGAAGAGACATGTACAGTAGATACCCAAAG  743

seq1  TGGTACCAAATAGTAACTGGGCACAGAGAAAAAAAAAATCACCTTCCAGA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCAAATAGTAACTGGGCACAGAGAAAAAAAAAATCACCTTCCAGA  793

seq1  AGATGCTCATTTTACAGAATATTGAGCATCATAGTCTTTTGAAATGGTTC  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCATTTTACAGAATATTGAGCATCATAGTCTTTTGAAATGGTTC  843

seq1  TTCCTCCTTTTATTTGTTGTATTGTGGATGGAAAACAGGCCATTGTACAG  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTTTTATTTGTTGTATTGTGGATGGAAAACAGGCCATTGTACAG  893

seq1  GTTAGGGAAGTGTGAACTATAGAACCTCTTTTGTAGAATAGTACAAACCA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGAAGTGTGAACTATAGAACCTCTTTTGTAGAATAGTACAAACCA  943

seq1  GGTTTCTTCCTTTGTTTTTAAAAATATCTCTTGTTTTGTAAAAACTCTTT  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTCCTTTGTTTTTAAAAATATCTCTTGTTTTGTAAAAACTCTTT  993

seq1  GGAAAGTTGTCAAAGGAAAGAGAGTTCCAATGGGTATTATAATGGGTATG  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTTGTCAAAGGAAAGAGAGTTCCAATGGGTATTATAATGGGTATG  1043

seq1  TTGATGGACACCTATAAGTACATTTACCCATTGTTAAGATTTTGTGACAT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGACACCTATAAGTACATTTACCCATTGTTAAGATTTTGTGACAT  1093

seq1  TTTCTCATAGTTAGTTGCAAAGGTCATGTCACTTTTTTGTGCAAATACTT  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATAGTTAGTTGCAAAGGTCATGTCACTTTTTTGTGCAAATACTT  1143

seq1  TAATATCATGGCATAAAAATAAAAACATTTTTCTTTCTGTATAGTCACAC  1183
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCATGGCATAAAAATAAAAACATTTTTCTTTCTGTATAGTCACAC  1193

seq1  ACCATTTTCAAGTTAGGAAATGTAGCATTGAAAGAATTC  1222
      |||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTCAAGTTAGGAAATGTAGCATTGAAAGAATTC  1232


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