BAC Information

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BAC

Clone NameB6Ng01-176N08
ChromosomeX (Build37)
Map Location 66,014,169 - 66,015,057
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC619873, 4933436I01Rik, LOC100040194, EG236844, LOC385372, LOC627888, LOC434788, Fmr1
Downstream geneFmr1nb, LOC100040244, EG627927, LOC666882, LOC671950, LOC100040255, Aff2, EG666577
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176N08.bB6Ng01-176N08.g
ACCGA004265GA004266
length593890
definitionB6Ng01-176N08.b B6Ng01-176N08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ataccatttttgttttgcacattatctacaatatgtctatattatttata
tcatccagaaaactaataaatgtctgttggtatacttttggagctaattt
attgaattctattatctaccacccttccagtcccccaacacaaggtaaga
gagaaagaaggttagagcagatagggagcagagacctctttagactactt
cctgcttattagggggatggggtttttagggccaagtctaatctaagtca
tcaggatatctccaaccagcaatccagtaaaatagcaatccaacaatagg
aaaagcagcaacagggagagccagggaggacagtgccctgccacatcacc
ctctcaggtctctcgaatttgtaccctctccaaagtcccaagcataatct
gtctgcagctggcaaaagtcttaagactcctagagcacaaggcaacatag
ttagtggctgtggagaatctgaagcaccccgtaccccatactttgcgatt
caaagacaaacatagtcacataacagaacttggttttttaaagaaaaaca
aatttcagtagtagtagtagtagtagtagtagtagtagtagta

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattagacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaactgatatcttaagttca
ttgaattttaaataattaaaaagtatgtttagaaaaccacttttggctaa
tgtttactacatgtgactatttatagtgactgtaacaactacagcacaaa
taggaatgttaagaggaattagaagcctgatgaaatttattttacttatt
tatttttgttgatatacaatacgtagcaatgcttctagtatatatactgt
aaaactgcatgtattaagtaaacatttatacacatgaataacatggtaag
tagactgtcagtacataaaatgtcatccatccaaagggttaaaatcggca
agtgtatggaaggctacagaaaaatgtcatcaataattagcctgttcttt
tttttttttttcagagctgaggagtgaacctaggaccttattgcttgcta
agtaaacactccgccactgagaaaaatcccaaatctcgcgagatcagcag
ctatcacgagagctcaagttccctgagagtttttttttcccgcgcccctc
cctgagagttttagtcccaggaggttctggactgctcgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_66014169_66015057
seq2: B6Ng01-176N08.g_63_952

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200

seq1  GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250

seq1  GAAAATTAGACATAGTACTACCAGAGGATCCCGCAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTAGACATAGTACTACCAGAGGATCCCGCAATACCTCTCCTGGGC  300

seq1  ATATATCCAGAAGATGCCCCAACTGGTAAGAAACTGATATCTTAAGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGATGCCCCAACTGGTAAGAAACTGATATCTTAAGTTCA  350

seq1  TTGAATTTTAAATAATTAAAAAGTATGTTTAGAAAACCACTTTTGGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTTAAATAATTAAAAAGTATGTTTAGAAAACCACTTTTGGCTAA  400

seq1  TGTTTACTACATGTGACTATTTATAGTGACTGTAACAACTACAGCACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTACATGTGACTATTTATAGTGACTGTAACAACTACAGCACAAA  450

seq1  TAGGAATGTTAAGAGGAATTAGAAGCCTGATGAAATTTATTTTACTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATGTTAAGAGGAATTAGAAGCCTGATGAAATTTATTTTACTTATT  500

seq1  TATTTTTGTTGATATACAATACGTAGCAATGCTTCTAGTATATATACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTTGATATACAATACGTAGCAATGCTTCTAGTATATATACTGT  550

seq1  AAAACTGCATGTATTAAGTAAACATTTATACACATGAATAACATGGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGCATGTATTAAGTAAACATTTATACACATGAATAACATGGTAAG  600

seq1  TAGACTGTCAGTACATAAAATGTCATCCATCCAAAGGGTTAAAATCGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTCAGTACATAAAATGTCATCCATCCAAAGGGTTAAAATCGGCA  650

seq1  AGTGTATGGAAGGCTACAGAAAAATGTCATCAATAATTAGCCTGTTC-TT  699
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTGTATGGAAGGCTACAGAAAAATGTCATCAATAATTAGCCTGTTCTTT  700

seq1  TTTTTTTTTTTCAGAGCTGAGGAGTGAACCTAGGACCTTA-TGCTTGCTA  748
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTTTTTTTTTCAGAGCTGAGGAGTGAACCTAGGACCTTATTGCTTGCTA  750

seq1  AGTAAACACTCCGCCACTGAGAAAAATCCCAAATCTCGCGAGATCAGCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACACTCCGCCACTGAGAAAAATCCCAAATCTCGCGAGATCAGCAG  800

seq1  CTATCACGAGAGCTCAAAGTTCCCTGAGAGTTTTTTTTT-CCGCGCCCCT  847
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  CTATCACGAGAGCTC-AAGTTCCCTGAGAGTTTTTTTTTCCCGCGCCCCT  849

seq1  CCCTGAGAGTTTTAAGTCCCAGGAGGTTCTGGACTGCTCGCA  889
      ||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCTGAGAGTTTT-AGTCCCAGGAGGTTCTGGACTGCTCGCA  890


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