MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-178L19
Chromosome	X (Build37)
Map Location	73,532,735 - 73,533,605
singlet/doublet	singlet
Overlap gene	none
Upstream gene	F8, Fundc2, Mtcp1, Brcc3, LOC667496, Vbp1, Rab39b, EG635243, Pls3, LOC635275, EG635295, LOC667537, LOC385472, LOC100041147, EG238829
Downstream gene	Magea7, 4930428D18Rik, EG544974, 4930468A15Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	F8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14069 MGI:88383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fundc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67391 MGI:1914641
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtcp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17763 MGI:102699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Brcc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210766 MGI:2389572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 93 ESTs, 3 Proteins pseudo : _no_value

name	Vbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22327 MGI:1333804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab39b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67790 MGI:1915040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635243 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635243 MGI:3644674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Pls3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102866 MGI:104807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC635275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG635295 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635295 MGI:3646473
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC667537 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC385472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100041147 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041147
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG238829 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238829 MGI:3648293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Magea7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17143 MGI:1333836
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	4930428D18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619294 MGI:3588232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG544974 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544974 MGI:3644190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	4930468A15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74987 MGI:1922237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins

name	F8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679732 GeneID:14069 MGI:88383
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor VIII transcript_id : NM_007977.1

name	Fundc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366263 GeneID:67391 MGI:1914641
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FUN14 domain containing 2 transcript_id : NM_026126.3

name	Mtcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343581 GeneID:17763 MGI:102699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mature T-cell proliferation 1 transcript_id : NM_010839.5

name	Mtcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372643 GeneID:17763 MGI:102699
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mature T-cell proliferation 1 transcript_id : NM_001039373.2

name	Brcc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542276 GeneID:210766 MGI:2389572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BRCA1/BRCA2-containing complex, subunit 3 transcript_id : NM_145956.2

name	Vbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248571 GeneID:22327 MGI:1333804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : von Hippel-Lindau binding protein 1 transcript_id : NM_011692.2

name	Rab39b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360120 GeneID:67790 MGI:1915040
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB39B, member RAS oncogene family transcript_id : NM_175122.3

name	Pls3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704119 GeneID:102866 MGI:104807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plastin 3 (T-isoform) transcript_id : NM_145629.1

name	LOC100041147 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271707 GeneID:100041147
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041147 transcript_id : XM_001475884.1

name	EG238829 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377390 GeneID:238829 MGI:3648293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG238829 transcript_id : NM_001013760.2

name	Magea7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271767 GeneID:17143 MGI:1333836
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : melanoma antigen, family A, 7 transcript_id : XM_001481307.1

name	4930428D18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365301 GeneID:619294 MGI:3588232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930428D18 gene transcript_id : NM_001033799.2

name	EG544974 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83001663 GeneID:544974 MGI:3644190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG544974 transcript_id : XM_484337.2

name	4930468A15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407580 GeneID:74987 MGI:1922237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins product : RIKEN cDNA 4930468A15 gene transcript_id : XM_135954.3

name	F8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679733 CCDS:CCDS30238.1 GeneID:14069 MGI:88383
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006953 - acute-phase response [Evidence IEA]; GO:0007596 - blood coagulation [Evidence IEA]; GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Factor VIII product : coagulation factor VIII protein_id : NP_032003.1

name	Fundc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541957 CCDS:CCDS30239.1 GeneID:67391 MGI:1914641
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : FUN14 domain containing 2 protein_id : NP_080402.2

name	Mtcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754760 GeneID:17763 MGI:102699
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : mature T-cell proliferation 1 isoform b protein_id : NP_034969.1

name	Mtcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86439951 CCDS:CCDS30241.1 GeneID:17763 MGI:102699
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : mature T-cell proliferation 1 isoform a protein_id : NP_001034462.1

name	Brcc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165366 GeneID:210766 MGI:2389572
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence ISS] GO_function : GO:0030234 - enzyme regulator activity [Evidence ISS] GO_process : GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0010165 - response to X-ray [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : 6.1A protein product : c6.1a protein protein_id : NP_666068.1

name	Vbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248572 GeneID:22327 MGI:1333804
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005634 - nucleus [Evidence TAS] codon_start : 1 product : von Hippel-Lindau binding protein 1 protein_id : NP_035822.2

name	Rab39b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424726 CCDS:CCDS30242.1 GeneID:67790 MGI:1915040
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB39B, member RAS oncogene family protein_id : NP_780331.1

name	Pls3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704120 CCDS:CCDS30243.1 GeneID:102866 MGI:104807
definition	codon_start : 1 note : T-plastin; plastin 3, T product : plastin 3 precursor protein_id : NP_663604.1

name	LOC100041147 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271708 GeneID:100041147
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475934.1

name	EG238829 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62000638 GeneID:238829 MGI:3648293
definition	codon_start : 1 note : novel protein similar to 1700042B14Rik product : hypothetical protein LOC238829 protein_id : NP_001013782.1

name	Magea7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271768 GeneID:17143 MGI:1333836
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : melanoma antigen, family A, 7 protein_id : XP_001481357.1 transl_except : (pos:73592973..73592975,aa:OTHER) transl_except : (pos:73593540..73593542,aa:OTHER) transl_except : (pos:73593627..73593629,aa:OTHER)

name	4930428D18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702129 GeneID:619294 MGI:3588232
definition	GO_component : GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC619294 protein_id : NP_001028971.1

name	EG544974 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83001664 GeneID:544974 MGI:3644190
definition	codon_start : 1 product : similar to Predicted gene, EG238829 protein_id : XP_484337.2

name	4930468A15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20984390 GeneID:74987 MGI:1922237
definition	codon_start : 1 product : hypothetical protein LOC74987 protein_id : XP_135954.1

name	EG635243 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:635243
definition	number : 1 pseudo : _no_value

name	LOC635275 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:635275
definition	number : 1 pseudo : _no_value

name	LOC635275 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:635275
definition	number : 2 pseudo : _no_value

name	EG635295 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:635295
definition	number : 1 pseudo : _no_value

name	LOC667537 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667537
definition	number : 1 pseudo : _no_value

name	LOC385472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385472
definition	number : 1 pseudo : _no_value

name	LOC385472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385472
definition	number : 2 pseudo : _no_value

name	LOC385472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385472
definition	number : 3 pseudo : _no_value

name	LOC385472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385472
definition	number : 4 pseudo : _no_value

name	LOC385472 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385472
definition	number : 5 pseudo : _no_value

name	LOC667496 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271764 GeneID:667496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 93 ESTs, 3 Proteins product : similar to high mobility group nucleosomal binding domain 1 pseudo : _no_value transcript_id : XR_033121.1

clone name	MSMg01-151B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-537J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-178L19.b	B6Ng01-178L19.g
ACC	GA005641	GA005642
length	871	1,080
definition	B6Ng01-178L19.b	B6Ng01-178L19.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctgtggcacaggatcagctagctccctgtgctgatgaatacctga aagatcctgtcccagactgctcttcagttcctgtgtcctgagtactcctg gcaggtccctctgagcagacgtggtggtcttacctgtgctcacagggatg tccatactgtgacaccaggtctctcccagcagtatttgggtatggagctc tgtggcacaggatcagctttgggcacagaaggaaactggaaggatcctgt cccaggctgttcctcagttcttccttatcagctcctaaattattgtgagg gttgtgtctaaaatttagtccagccattgatctcttctactgaacagcat tggaactggaccactagattttcagggtataaatcagttgttctattccc tagttttactccatcgcctaaacaattttaaggttatctttttagacagg ggaatttcatcggaaagatggactctatccgtaggtggaatcatgtttct tcttctcttttaattccagctggaaggatcattggaaataacccaggaaa agcaggaattaataaaatatggcatattaacacaattggatatttatact catgaattcatattcaataatcatgaaatttgcagataaataactgaaat tagacaaaaaatcttcctgagataatgcaggttcaaaaggacaaatattg catgtgtgaataatagctattaagttaatgataacgaagatacaacttta gaaacacagaggctaggtatagagtaagggaatagggaggaagaatagat ttccttaaggaggggaaacagaatagactgctattggattgatgagggaa ggagaattggaattgaatata	gaattcattatctgtcctagagactgatttctgatattttggtgaagaat ctggctgctctttgctcatgtctgaaacatctacctaaggtgaagagaag cagattaattgcattgatgaagtctcaaaaacaaacaaacaaacaaacaa aacagcatagactttgacttctggtttactctcataaagagtgttttgaa caagcatagcaagcttaggaaggaaaaatacaaaatgtgtgggtcaagta ttaaaggggaaccagaaagtgaaatggagctgaattctgtgttcaaggag ataaacaaattgcgggagtggctatctcatgggaaaatcccacctagcaa agcttattgtttgtgtttacagttgaacaaggcatacttaagtcataatc ggtgtcattacctggcccttgttttcattttttcttttaatcagaaaaga actacaattccaaaatagagggtacaattgtgtaagctttgatttcttta aaacctacttttaataagtgtcttagtcaggatttctattcttggacaaa acaccatgacccagaagcagattagggagaaaagggtttattcagcttat actttcacattgctgttcatcaccaaaggaagtcaggactgaaggaagca ggagctgatgcagaggccatggaggggtgttacttactggtttgcttccc ctggcttgctcagcctgctctcttatagaacccaagactaccagcccagg gatggaatcactgacaatgggccctcctcacttgatcactaattgaaaaa atgccttaaagttggatctcatggaggcatttcctcaactgaagctcctt tccctggacaactccatcctgtgtcaagttgacacataaaactagtaagt acaataagggttctcaaacattttgacccccattctagggcaccatccaa aggtaggggagaaaagatgctaaatagggccaagggaatgtgatctatta gaaatagtccttgcggtgaatccatccagttagtaagggatatcagcagt ccagttaagtattcgctcaggaaactcgaa
quality values	Open. Hide. 58 31 35 35 58 62 47 41 47 62 47 56 46 56 41 62 62 41 37 47 41 54 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 54 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 59 59 59 62 62 62 59 59 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 54 59 62 62 62 62 59 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 42 62 62 62 58 54 45 58 58 58 58 58 58 58 36 58 45 42 58 58 58 58 58 58 58 58 58 54 58 58 58 49 33 54 54 58 58 58 58 58 54 58 58 58 58 58 39 46 54 54 58 58 54 58 58 58 58 58 58 58 54 54 58 58 58 58 58 54 58 58 49 58 41 58 58 58 58 58 58 53 53 58 58 54 51 58 51 58 58 51 41 58 58 58 48 47 58 53 52 53 53 51 58 49 33 58 51 51 49 52 53 50 58 58 58 58 53 49 58 58 58 47 41 46 58 32 50 58 51 53 46 58 41 54 58 58 58 50 46 51 51 46 41 37 39 58 58 58 58 34 41 53 41 49 50 58 52 58 58 22 36 33 51 51 50 58 37 50 33 51 37 50 52 39 58 58 44 42 58 51 32 32 54 54 49 39 45 53 54 42 40 49 54 53 54 53 53 54 37 37 42 52 52 49 30 51 53 49 53 34 32 51 43 44 42 30 45 33 49 33 31 32 35 51 40 54 54 37 35 24 27 40 18 35 39 53 54 53 40 33 53 54 40 40 38 52 37 33 49 14 47 36 39 31 26 47 31 32 42 29 47 52 35 31 34 22 25 49 22 42 41 39 32 24 52 47 12 6 32 40 18 14 29 26 40 30 18 16 16 30 21 14 24 16 27 26 30 16 30 12 8 51 30 30 31 37 22 25 11 28 31 14 12 22 11 30 26 32 31 22 27 22 28 46 8 17 21 42 32 31 30 30 28 14 11 27 28 30 30 14 29 21 16 25 18 8 13 12 15 13 23 6 21 10 7 13 12 9 7 9	Open. Hide. 62 44 51 47 62 47 32 62 59 62 62 62 62 43 49 62 62 59 59 59 62 59 59 49 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 49 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 36 56 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 47 42 62 62 58 58 58 58 58 58 58 58 58 58 54 52 46 58 58 58 54 54 58 43 54 58 58 54 54 58 58 54 54 58 58 52 58 54 54 58 33 54 58 35 58 58 58 54 58 58 58 54 45 58 42 39 58 54 52 54 58 58 52 54 58 58 43 54 54 54 58 58 58 58 54 39 54 51 58 58 58 49 58 58 54 51 51 39 51 58 50 51 49 50 58 42 37 58 58 51 52 53 50 53 51 58 45 38 58 58 58 51 29 58 51 54 46 49 50 27 58 51 32 51 58 52 41 33 47 46 52 33 44 17 33 41 41 40 50 50 51 32 21 49 58 54 37 51 43 50 41 39 48 53 41 58 53 58 44 35 36 38 51 50 58 41 26 58 58 58 52 53 42 39 51 41 51 39 41 42 39 28 47 54 40 49 28 50 40 52 42 54 54 42 43 42 32 41 34 42 54 53 28 53 42 53 28 40 34 45 41 25 31 49 54 46 32 40 54 54 33 26 28 32 53 26 31 37 25 42 37 45 31 32 28 42 31 34 54 35 37 54 53 35 28 33 27 30 35 39 33 29 45 31 35 34 31 45 32 34 32 32 34 32 32 47 46 51 51 36 29 33 31 21 15 20 20 51 32 35 25 29 25 31 21 25 31 31 23 28 31 45 31 42 33 30 23 15 26 51 33 24 30 31 32 30 20 23 30 35 24 34 31 31 31 31 31 28 48 31 31 46 25 27 14 12 13 18 27 26 25 43 38 26 14 32 25 33 19 29 17 37 32 34 25 25 26 28 32 34 21 8 19 31 30 41 21 46 46 31 30 32 27 31 31 27 24 23 29 31 10 6 19 22 18 25 17 48 31 14 24 31 32 32 11 44 32 25 17 27 43 43 26 23 32 26 41 36 41 27 27 26 30 19 5 8 6 38 9 30 9 9 19 20 26 21 27 32 39 15 23 30 15 29 24 48 33 19 24 6 16 43 43 32 16 31 19 31 23 21 12 39 10 23 15 6 7 5 5 6 10 10 25 39 7 25 12 19 21 11 14 4 3 6 9 15 23 27 7 10 18 31 16 21 18 8 10 6 8 28 7 3 3 19 15 3 8 7 8 22 7 22 21 7 9 6 4 9 9 12 19 8 19 16 21 8 25 14 10 15 11 20 13 5 3 9 11 20 16 15 28 11 20 8 22 8 18 4 4 7 12 8 4 4 6 3 2 3 14 17 6 6 5 14 7 7 1 3 3

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_73532735_73533605
seq2: B6Ng01-178L19.b_42_912

seq1  GAATTCTGTGGCACAGGATCAGCTAGCTCCCTGTGCTGATGAATACCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGCACAGGATCAGCTAGCTCCCTGTGCTGATGAATACCTGA  50

seq1  AAGATCCTGTCCCAGACTGCTCTTCAGTTCCTGTGTCCTGAGTACTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCTGTCCCAGACTGCTCTTCAGTTCCTGTGTCCTGAGTACTCCTG  100

seq1  GCAGGTCCCTCTGAGCAGACGTGGTGGTCTTACCTGTGCTCACAGGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCCCTCTGAGCAGACGTGGTGGTCTTACCTGTGCTCACAGGGATG  150

seq1  TCCATACTGTGACACCAGGTCTCTCCCAGCAGTATTTGGGTATGGAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACTGTGACACCAGGTCTCTCCCAGCAGTATTTGGGTATGGAGCTC  200

seq1  TGTGGCACAGGATCAGCTTTGGGCACAGAAGGAAACTGGAAGGATCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCACAGGATCAGCTTTGGGCACAGAAGGAAACTGGAAGGATCCTGT  250

seq1  CCCAGGCTGTTCCTCAGTTCTTCCTTATCAGCTCCTAAATTATTGTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTGTTCCTCAGTTCTTCCTTATCAGCTCCTAAATTATTGTGAGG  300

seq1  GTTGTGTCTAAAATTTAGTCCAGCCATTGATCTCTTCTACTGAACAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTCTAAAATTTAGTCCAGCCATTGATCTCTTCTACTGAACAGCAT  350

seq1  TGGAACTGGACCACTAGATTTTCAGGGTATAAATCAGTTGTTCTATTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTGGACCACTAGATTTTCAGGGTATAAATCAGTTGTTCTATTCCC  400

seq1  TAGTTTTACTCCATCGCCTAAACAATTTTAAGGTTATCTTTTTAGACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTACTCCATCGCCTAAACAATTTTAAGGTTATCTTTTTAGACAGG  450

seq1  GGAATTTCATCGGAAAGATGGACTCTATCCGTAGGTGGAATCATGTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCATCGGAAAGATGGACTCTATCCGTAGGTGGAATCATGTTTCT  500

seq1  TCTTCTCTTTTAATTCCAGCTGGAAGGATCATTGGAAATAACCCAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTTTAATTCCAGCTGGAAGGATCATTGGAAATAACCCAGGAAA  550

seq1  AGCAGGAATTAATAAAATATGGCATATTAACACAATTGGATATTTATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAATTAATAAAATATGGCATATTAACACAATTGGATATTTATACT  600

seq1  CATGAATTCATATTCAATAATCATGAAATTTGCAGATAAATAACTGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTCATATTCAATAATCATGAAATTTGCAGATAAATAACTGAAAT  650

seq1  TAGACAAAAAATCTTCCTGAGATAATGCAGGTTCAAAAGGACAAATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAAAAATCTTCCTGAGATAATGCAGGTTCAAAAGGACAAATATTG  700

seq1  CATGTGTGAATAATAGCTATTAAGTTAATGATAACGAAGATACAACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGAATAATAGCTATTAAGTTAATGATAACGAAGATACAACTTTA  750

seq1  GAAACACAGAGGCTAGGTATAGAGTAAGGGAATAGGGAGGAAGAATAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAGAGGCTAGGTATAGAGTAAGGGAATAGGGAGGAAGAATAGAT  800

seq1  TTCCTTAAGGAGGGGAAACAGAATAGACTGCTATT-GATTGATGAGGGAA  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCCTTAAGGAGGGGAAACAGAATAGACTGCTATTGGATTGATGAGGGAA  850

seq1  GGAGAATTGGAA-TGAAAATATA  871
      |||||||||||| |||| |||  
seq2  GGAGAATTGGAATTGAATATA--  871

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information