MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-180K10
Chromosome	X (Build37)
Map Location	155,265,049 - 155,266,213
singlet/doublet	singlet
Overlap gene	LOC436243
Upstream gene	Cnksr2, EG667483, LOC671033, LOC667487
Downstream gene	LOC100040371, Rps6ka3, Eif1ay, Mtap7d2, A830080D01Rik, LOC100041359, Sh3kbp1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cnksr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245684 MGI:2661175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667483 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667483 MGI:3645697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 24 Proteins pseudo : _no_value

name	LOC671033 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671033
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667487 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 359 ESTs, 9 Proteins pseudo : _no_value

name	LOC436243 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	LOC100040371 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Rps6ka3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110651 MGI:104557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif1ay (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66235 MGI:1913485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtap7d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78283 MGI:1917474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A830080D01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382252 MGI:2685992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041359 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 137 ESTs, 1 Protein

name	Sh3kbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58194 MGI:1889583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnksr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343125 GeneID:245684 MGI:2661175
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : connector enhancer of kinase suppressor of Ras 2 transcript_id : NM_177751.2

name	Rps6ka3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22507356 GeneID:110651 MGI:104557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S6 kinase polypeptide 3 transcript_id : NM_148945.1

name	Eif1ay (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370237 GeneID:66235 MGI:1913485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 1A, Y-linked transcript_id : NM_025437.3

name	Mtap7d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487456 GeneID:78283 MGI:1917474
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAP7 domain containing 2 transcript_id : NM_001081124.1

name	A830080D01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115511061 GeneID:382252 MGI:2685992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830080D01 gene transcript_id : NM_001033472.2

name	LOC100041359 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272528 GeneID:100041359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 137 ESTs, 1 Protein product : similar to hepatitis B virus X interacting protein transcript_id : XM_001476187.1

name	Sh3kbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892923 GeneID:58194 MGI:1889583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain kinase binding protein 1 transcript_id : NM_021389.4

name	Cnksr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244248 CCDS:CCDS30501.1 GeneID:245684 MGI:2661175
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] [Evidence IEA]; GO:0019901 - protein kinase binding [Evidence ISS] GO_process : GO:0007243 - protein kinase cascade [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 note : connector enhancer of KSR2 product : connector enhancer of kinase suppressor of Ras 2 protein_id : NP_808419.1

name	Rps6ka3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507357 CCDS:CCDS30502.1 GeneID:110651 MGI:104557
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 note : ribosomal protein S6 kinase 2 product : ribosomal protein S6 kinase polypeptide 3 protein_id : NP_683747.1

name	Eif1ay (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541824 GeneID:66235 MGI:1913485
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 1A, Y-linked protein_id : NP_079713.2

name	Mtap7d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487457 GeneID:78283 MGI:1917474
definition	codon_start : 1 note : novel E-MAP-115 family protein product : MAP7 domain containing 2 protein_id : NP_001074593.1

name	A830080D01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115511062 CCDS:CCDS30503.1 GeneID:382252 MGI:2685992
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC382252 protein_id : NP_001028644.2

name	LOC100041359 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272529 GeneID:100041359
definition	codon_start : 1 product : similar to hepatitis B virus X interacting protein protein_id : XP_001476237.1

name	Sh3kbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27151744 GeneID:58194 MGI:1889583
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : Sh3 containing, expressed in astrocytes product : SH3-domain kinase binding protein 1 protein_id : NP_067364.2

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 1 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 2 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 3 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 4 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 5 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 6 pseudo : _no_value

name	LOC671033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671033
definition	number : 7 pseudo : _no_value

name	LOC100040371 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040371
definition	number : 1 pseudo : _no_value

name	EG667483 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272498 GeneID:667483 MGI:3645697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 24 Proteins product : predicted gene, EG667483 pseudo : _no_value transcript_id : XR_002032.2

name	LOC667487 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272499 GeneID:667487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 359 ESTs, 9 Proteins product : similar to 60S ribosomal protein L9 pseudo : _no_value transcript_id : XR_031772.1

name	LOC436243 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272500 GeneID:436243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to protein 40kD pseudo : _no_value transcript_id : XR_031791.1

clone name	MSMg01-481G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115M20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-170J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-116B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-180K10.b	B6Ng01-180K10.g
ACC	GA007026	GA007027
length	1,251	1,152
definition	B6Ng01-180K10.b	B6Ng01-180K10.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc gtactgttcaacctcagggcagtcggtttcaaggtccgccctatgcagag cccccgccctgcgtagtgcgtcagcaatgcgcagagaggcaatgcgcaga gagatgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattca ttcccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaa agagccgagggtgggcgtgtccacgctccggtagaatacttacaaattaa agagcttgccgagtcggtccgtaaatacggaaccaatgctaattttacct tggtgcagttagacaggctcgccggcatggcactaactcctgctgactgg caaacggttgtaaaagccgctctccctagtatgggcaaatatatggaatg gagagctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcag ctgctttgactccagagcagagagattggacttttgacttgttaacgggt cagggagcttattctgctgatcaaacaaactaccattggggagcttatgc ccagatttcttccacggctattagggcctggaaggcgctctcccgagcag gtgaaaccactggtcaattaacaaacgagtccagggacctcaggaatcct tctcagattttgtggccagaatgacagaggcagcagagcgtatttttgga gattcagagcaagccgcgcctctggtagaacagctaatctatgagcaagc cacaaaggagtgccgagcggccatagccccaagaaagaacaaaggcttac aagactggctcagggtctgtcgagagcttgggggacctctcaccaatgca ggcttagcggccgccatcctttcaatctcagaaccgctccatggcagaaa tgatcagaggacatgtttttaattgccggaaagcctgggcattttagaaa gatgcagagcctccagaataaacagggggggactcctccacttcttgcct cctaagtgtgccaaggtatccatagaagcctgaaccagtgtccgctctct gtgagggattataagggccagagccttcccaccctgaatgtccatccagc cttagttgccaaaaactgtctacatcggcccctcgcgttacctagagggc t	gaattcagctaaaatgtgcacctacaaatccaaagtccacaatttgcaat gtgaagtgaagggatgtgtggaaagccagagattcttcatgaaactgaga gtttaaggtcttcccccaacaagctcacttttctcagctatccctggtcc catgaagggtatagtagcagtgtttggaatcctaagattaattcttcaga tactgggaccatcatcttcctccctaaggaaaggctactattttattgaa gccaccattctggaaagctagaagggtcattagagaggaggtaaagttga aaactaaacacacttgactttgtgacctaatgtcaatcttcaggaaggag ggccattaacaaaagacacaaggcatgaacctatgaagagcattattagt gacattctgcccagagcacctcttccttaggagatatatcccacttgagg cctaaagacctatgagtacaagtagaaactggcggaatggctaagatgga tgataaacatcacagcatggaagagagaatggattttccacacagtatct ggctaggacttatctctgtgtcttaagaaatcaggcctgtgatagttacc atccttatatgcaactgctcaggcattccgaattctgaagtctaacattt accaagatacacttgtcattcaaactgatatttccttctgtattttcagc tgtgttggtggtttgaacagctgtctacccagtcaacctgtccaccaatc ctcctttctaatcagataaactcagcaactttctatgtgtctgatccatc taccttggttcagacacttatctttctccatgtcactaccaggctgttgg atataaaatatatatcaagatctataaatccactttaagaactgtcaatg gtctttccttgttgcctctgggagaagaagcaaacttttttgcaaagcaa agtgggtttgttggtaagttctacaaacacccccaagccttctcaaatat gtttccatgatatgattgcataccccatagccagtccaaagtaccacagt ggatcatctgatcaacataacattgggttcagctgtactagcacaagtgt ccaacctctttttatattgaattttctccattacatgcatgctattcctg aa
quality values	Open. Hide. 58 39 42 31 58 54 58 62 62 62 62 62 62 49 47 62 47 62 51 51 39 62 54 62 62 62 62 62 47 47 62 43 41 32 50 27 22 28 28 23 28 38 33 29 38 43 56 62 59 59 62 62 59 59 62 62 59 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 54 62 62 59 62 59 59 59 56 54 48 42 54 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 62 62 62 62 62 62 62 37 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 34 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 48 62 62 62 62 62 54 62 62 42 62 62 52 58 52 58 54 58 58 58 58 58 52 58 54 52 48 58 58 48 54 52 58 58 54 43 58 52 45 39 52 58 49 58 58 52 58 39 58 54 42 39 58 58 58 54 54 58 58 58 58 58 58 42 58 58 58 58 48 47 58 58 54 58 58 58 54 54 54 58 54 58 54 54 58 49 54 51 58 51 58 58 52 58 58 38 58 41 39 49 50 48 40 48 47 50 51 51 58 41 46 58 58 58 58 58 58 58 40 49 58 54 52 51 49 43 43 49 46 49 46 50 58 51 51 39 51 53 47 27 46 49 58 51 54 51 51 31 50 26 54 49 32 51 51 54 48 44 50 32 51 27 50 53 53 42 51 39 51 54 40 46 33 50 50 41 58 40 58 46 49 40 40 43 35 41 30 51 58 50 32 29 37 50 41 26 36 39 22 19 12 6 5 4 5 10 53 41 36 39 51 44 21 15 50 44 41 30 24 54 42 32 40 39 41 49 49 42 53 42 35 17 39 30 54 54 51 35 37 54 28 12 54 26 41 49 21 25 52 42 32 21 37 54 14 28 31 40 42 40 45 33 44 15 49 37 39 33 28 54 54 54 40 32 33 35 23 28 13 31 32 32 35 53 18 36 31 34 45 35 47 31 32 42 34 40 34 28 32 36 47 26 35 31 53 32 31 28 31 47 40 22 33 31 35 33 28 39 35 45 17 43 21 20 29 28 21 12 27 30 29 31 18 29 31 12 29 43 28 30 17 41 29 30 29 28 31 12 13 35 34 25 25 41 40 16 10 32 23 33 46 29 26 36 32 30 31 42 32 20 31 22 16 14 21 31 18 31 21 31 22 31 31 37 19 25 6 4 10 32 18 25 26 32 31 21 15 7 30 27 26 24 32 32 17 39 48 48 41 36 25 7 27 31 31 25 23 30 27 25 28 23 33 29 19 12 21 24 18 29 25 21 13 28 17 22 33 27 33 33 29 15 37 25 30 16 48 9 17 19 21 31 21 9 18 16 28 36 32 17 26 30 17 12 26 33 18 27 21 32 5 21 21 29 36 22 32 32 27 34 28 19 14 34 11 22 15 11 14 25 24 17 43 40 43 22 27 13 11 15 21 8 12 22 12 30 27 12 13 22 15 12 20 19 18 8 15 26 34 38 16 3 3 11 47 8 6 5 12 7 12 11 9 32 10 15 7 17 11 24 8 6 7 19 6 9 16 5 6 10 27 34 40 29 40 47 18 8 6 9 7 6 9 15 6 7 5 6 4 4 13 11 8 15 8 11 5 10 20 20 19 11 12 8 5 22 8 6 19 7 17 5 2 2 12 13 16 20 16 8 7 7 6 4 6 7 9 13 17 9 12 11 6 3 1 2 1 6 16 6 9 6 6 4 10 8 12 7 5 8 7 22 17 3 4 4 4 8 4 11 3 26 17 4 6 5 6 18 4 2 5 3 3 3 13 5 4 7 16 9 4 5 4 7 4 5 7 5 5 13 3 4 5 12 7 5 7 16 6 3 2 1 4 3 3 6 15 28 28 28 10 2 1 4 4 10 5 5 5 5 6 2 5 3 3 18 5 5 7 7 5 6 18 5 6 4 15 11 4 4 6 7 23 14 2 3 1	Open. Hide. 62 44 59 59 62 59 43 62 62 59 62 62 29 35 38 29 28 28 28 28 32 32 33 32 43 56 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 56 54 49 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 56 44 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 54 45 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 58 37 58 58 58 45 31 58 58 54 37 58 58 58 58 54 49 58 54 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 54 48 58 58 58 58 52 58 58 58 58 54 58 54 54 58 54 53 58 52 49 58 58 54 54 52 42 54 34 58 58 58 54 58 36 48 58 58 58 54 53 58 53 42 58 58 58 54 58 53 53 53 54 58 53 40 58 58 58 58 50 58 53 49 19 49 46 40 54 53 54 54 47 58 53 53 58 53 58 49 58 53 45 39 53 41 52 50 49 42 58 54 49 50 51 41 48 48 51 53 52 50 50 50 48 54 44 58 50 39 40 52 53 41 28 58 54 51 51 58 51 42 53 41 49 50 40 49 37 51 50 50 58 39 52 31 58 58 41 50 50 37 50 51 58 37 54 37 41 58 39 33 58 46 18 54 39 53 32 51 41 35 49 37 52 52 42 45 42 31 23 33 12 22 49 37 42 32 32 29 30 34 51 37 44 40 37 40 50 30 53 35 25 33 52 34 54 53 54 53 40 40 33 33 37 37 37 15 47 26 33 54 26 41 53 41 32 34 40 51 31 40 53 54 28 41 32 34 32 53 32 53 31 34 34 32 45 26 29 32 30 53 34 32 35 45 32 30 31 53 53 34 53 26 28 33 33 22 32 41 35 53 31 30 42 42 51 51 30 30 32 13 8 24 40 30 30 30 37 36 29 30 38 30 31 51 29 31 32 46 8 12 30 27 28 31 31 31 48 48 36 25 30 36 36 31 31 31 31 26 25 29 27 21 32 31 29 31 33 46 29 42 25 41 23 30 33 46 42 19 33 23 25 14 12 16 31 13 28 33 21 24 30 41 16 19 23 39 25 24 31 18 18 39 17 22 31 22 24 30 30 24 41 46 33 26 9 31 44 24 32 25 14 25 25 38 31 27 32 48 48 48 48 44 22 18 31 36 15 13 31 31 44 19 17 29 24 44 7 14 28 13 18 14 17 30 22 22 22 32 22 22 31 31 23 27 12 19 43 21 5 8 5 30 33 30 15 16 31 22 28 18 7 7 14 27 31 19 43 19 22 21 15 30 32 39 33 13 28 20 24 20 21 8 7 19 19 25 5 9 28 20 20 27 16 18 32 30 29 24 24 27 6 19 11 13 6 4 3 7 11 30 11 13 10 17 28 15 11 17 20 5 3 6 10 28 20 11 34 8 23 24 24 19 14 21 10 3 3 5 23 9 17 5 7 5 8 25 26 17 7 12 22 13 15 18 14 10 1 6 14 7 18 5 14 4 7 4 22 12 5 9 5 3 3 5 6 7 8 11 6 7 30 30 28 9 4 3 6 13 9 3 2 3 3 3 16 4 5 8 3 4 6 16 17 1 2 1 5 2 2 3 1 6 5 1 2 5 4 9 13 5 15 6 24

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_155265049_155266213
seq2: B6Ng01-180K10.g_67_1218 (reverse)

seq1  TTCAGG-ATAGCATTTGAAATGTAAATGAAGAAAATATCCAATATAAAAA  49
      |||||| |||||||     |||| |||| |||||  || |||||||||||
seq2  TTCAGGAATAGCAT---GCATGT-AATGGAGAAA--ATTCAATATAAAAA  44

seq1  GAGTTTGGGACACTTGTGCTAGTACCAGCTGGAAACCCATTGTTTATGTG  99
      ||| || ||||||||||||||||| ||||||  |||||| || |||||| 
seq2  GAGGTT-GGACACTTGTGCTAGTA-CAGCTG--AACCCAATG-TTATGT-  88

seq1  TGATCAGATTGATCAACTGTGGTACTTTGGAACTGGCTATGGGGTATGCA  149
      |||||||| ||||| ||||||||||||||| |||||||||||||||||||
seq2  TGATCAGA-TGATCCACTGTGGTACTTTGG-ACTGGCTATGGGGTATGCA  136

seq1  TTCATATCATGGAAACATATTTGAGAGGCTTTGGGGGTTGTTTGTAGAAC  199
       ||||||||||||||||||||||||| |  ||||||| ||||||||||||
seq2  ATCATATCATGGAAACATATTTGAGAAGGCTTGGGGG-TGTTTGTAGAAC  185

seq1  TTACCAACAAA-CCACTTTGCTTTGCAAAAAAGTTTGCTTCTTCTCCCAG  248
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTACCAACAAACCCACTTTGCTTTGCAAAAAAGTTTGCTTCTTCTCCCAG  235

seq1  AGGCAACAAGGAAAGACCATTGACAGTTCTTAAAGTGGATTTATAGATCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAAGGAAAGACCATTGACAGTTCTTAAAGTGGATTTATAGATCT  285

seq1  TGATATATATTTTATATCCAACAGCCTGGTAGTGACATGGAGAAAGATAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATATTTTATATCCAACAGCCTGGTAGTGACATGGAGAAAGATAA  335

seq1  GTGTCTGAACCAAGGTAGATGGATCAGACACATAGAAAGTTGCTGAGTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGAACCAAGGTAGATGGATCAGACACATAGAAAGTTGCTGAGTTT  385

seq1  ATCTGATTAGAAAGGAGGATTGGTGGACAGGTTGACTGGGTAGACAGCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATTAGAAAGGAGGATTGGTGGACAGGTTGACTGGGTAGACAGCTG  435

seq1  TTCAAACCACCAACACAGCTGAAAATACAGAAGGAAATATCAGTTTGAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCACCAACACAGCTGAAAATACAGAAGGAAATATCAGTTTGAAT  485

seq1  GACAAGTGTATCTTGGTAAATGTTAGACTTCAGAATTCGGAATGCCTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTGTATCTTGGTAAATGTTAGACTTCAGAATTCGGAATGCCTGAG  535

seq1  CAGTTGCATATAAGGATGGTAACTATCACAGGCCTGATTTCTTAAGACAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCATATAAGGATGGTAACTATCACAGGCCTGATTTCTTAAGACAC  585

seq1  AGAGATAAGTCCTAGCCAGATACTGTGTGGAAAATCCATTCTCTCTTCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAAGTCCTAGCCAGATACTGTGTGGAAAATCCATTCTCTCTTCCA  635

seq1  TGCTGTGATGTTTATCATCCATCTTAGCCATTCCGCCAGTTTCTACTTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGATGTTTATCATCCATCTTAGCCATTCCGCCAGTTTCTACTTGT  685

seq1  ACTCATAGGTCTTTAGGCCTCAAGTGGGATATATCTCCTAAGGAAGAGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAGGTCTTTAGGCCTCAAGTGGGATATATCTCCTAAGGAAGAGGT  735

seq1  GCTCTGGGCAGAATGTCACTAATAATGCTCTTCATAGGTTCATGCCTTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGCAGAATGTCACTAATAATGCTCTTCATAGGTTCATGCCTTGT  785

seq1  GTCTTTTGTTAATGGCCCTCCTTCCTGAAGATTGACATTAGGTCACAAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGTTAATGGCCCTCCTTCCTGAAGATTGACATTAGGTCACAAAG  835

seq1  TCAAGTGTGTTTAGTTTTCAACTTTACCTCCTCTCTAATGACCCTTCTAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGTGTTTAGTTTTCAACTTTACCTCCTCTCTAATGACCCTTCTAG  885

seq1  CTTTCCAGAATGGTGGCTTCAATAAAATAGTAGCCTTTCCTTAGGGAGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGAATGGTGGCTTCAATAAAATAGTAGCCTTTCCTTAGGGAGGA  935

seq1  AGATGATGGTCCCAGTATCTGAAGAATTAATCTTAGGATTCCAAACACTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGGTCCCAGTATCTGAAGAATTAATCTTAGGATTCCAAACACTG  985

seq1  CTACTATACCCTTCATGGGACCAGGGATAGCTGAGAAAAGTGAGCTTGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATACCCTTCATGGGACCAGGGATAGCTGAGAAAAGTGAGCTTGTT  1035

seq1  GGGGGAAGACCTTAAACTCTCAGTTTCATGAAGAATCTCTGGCTTTCCAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAGACCTTAAACTCTCAGTTTCATGAAGAATCTCTGGCTTTCCAC  1085

seq1  ACATCCCTTCACTTCACATTGCAAATTGTGGACTTTGGATTTGTAGGTGC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTTCACTTCACATTGCAAATTGTGGACTTTGGATTTGTAGGTGC  1135

seq1  ACATTTTAGCTGAATTC  1165
      |||||||||||||||||
seq2  ACATTTTAGCTGAATTC  1152

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information