BAC Information

Click to search

BAC

Clone NameB6Ng01-181H08
ChromosomeX (Build37)
Map Location 4,860,826 - 4,861,183
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933, LOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968
Downstream geneLOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751, Nudt10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181H08.bB6Ng01-181H08.g
ACCGA007613GA007614
length1,190358
definitionB6Ng01-181H08.b B6Ng01-181H08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagggaggggtagaaactacaagttgctgcaggaacctcacaag
cagttcttaggtgagtttttctcaatggcagtaatatcacaaattgagct
caacaacactatgtaagatgacaccaataatgtgtgtcattagcgaagaa
taataatgaagtggagcaaaccaaaccaaagtttggtgctcttctcccac
tgtctgtgagatcatatttatattccttcgtcacaggtcctttcacctgt
ttgctatatctaaacatcctttcaactctgtctacttcaggaaaatggtc
tttcacttgtttactttagcaagacatcttttttcatctgtgtgccccag
caaaacatcataattaactttccaaagaaactagaagtttccacttcaaa
ctcacccacaaaactttcaacccaaactttatcctgcctacaagaaatgc
tgggacaggggacagagcagagactgagggaatgaccaagcaataaccag
cccaactagagacccatctcacccttctttcttaaggtcatctgaccacc
actcccgtactggtgccatacacaatggcctagcccctcccctatcgatc
acaattaagagaatgcattatagtctgatcttatggagggattttctcaa
ttgaggctccctcatttctgatgaatctagcttatgttaagttgacataa
aactagccagtacctccttcatattcataaaacttatttttaaggtcttt
ttcttgtattatagctatgttgaaatactgagggcctgctgtggtagggt
tgctgggctttaatggagatgtattgttcaggctattattatgttttgac
actggtgtcttggcatcttggattgggaagattgtattcctacatcctaa
tacctggtcttctccttgtgaggtgggtgttttgttccttgggtttctat
tttctctgtggtcttagagagtgtgtaactattttgttgcctggtaggaa
attctttttgggatactatatattacgtccagtagagtttcagtaaaatg
tgttcttgggtatagttaactacaatttagagagaatgggctagagtcgg
agcttatggggtccaaggagatgaaagcagaagttcacagactgctagtc
ttgcgaatgcatatatggtagagaaccttatcacaaaggg
atactaggaacttaatattggtgaacattataggaagtgaaataaagaac
actgcagatttctcctgagatgctagcaaatgaaaaagaaagtagattat
tgttctaattacatataggttttttactattatatatcaaagtaaactgt
gttaacttatagtaactttggccaatgactcaacaactataattcattcc
tgctactagaggttttatttggtagcatttgcgtcattatatttctcatt
ataaggtgatgggagaaaaggcccttggtcctgtgaaggcttgatgccct
agcataggggaatgctagggcagtgagatgggagtcggtaggtgggtggg
tggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_4860826_4861183
seq2: B6Ng01-181H08.g_69_426

seq1  ATACTAGGAACTTAATATTGGTGAACATTATAGGAAGTGAAATAAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGGAACTTAATATTGGTGAACATTATAGGAAGTGAAATAAAGAAC  50

seq1  ACTGCAGATTTCTCCTGAGATGCTAGCAAATGAAAAAGAAAGTAGATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGATTTCTCCTGAGATGCTAGCAAATGAAAAAGAAAGTAGATTAT  100

seq1  TGTTCTAATTACATATAGGTTTTTTACTATTATATATCAAAGTAAACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAATTACATATAGGTTTTTTACTATTATATATCAAAGTAAACTGT  150

seq1  GTTAACTTATAGTAACTTTGGCCAATGACTCAACAACTATAATTCATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTTATAGTAACTTTGGCCAATGACTCAACAACTATAATTCATTCC  200

seq1  TGCTACTAGAGGTTTTATTTGGTAGCATTTGCGTCATTATATTTCTCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTAGAGGTTTTATTTGGTAGCATTTGCGTCATTATATTTCTCATT  250

seq1  ATAAGGTGATGGGAGAAAAGGCCCTTGGTCCTGTGAAGGCTTGATGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTGATGGGAGAAAAGGCCCTTGGTCCTGTGAAGGCTTGATGCCCT  300

seq1  AGCATAGGGGAATGCTAGGGCAGTGAGATGGGAGTCGGTAGGTGGGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGGGGAATGCTAGGGCAGTGAGATGGGAGTCGGTAGGTGGGTGGG  350

seq1  TGGAGGAA  358
      ||||||||
seq2  TGGAGGAA  358