BAC Information

Click to search

BAC

Clone NameB6Ng01-183F03
ChromosomeX (Build37)
Map Location 161,024,987 - 161,025,979
singlet/doubletsinglet
Overlap genenone
Upstream gene1700045I19Rik, Ap1s2, Zrsr2, Car5b, Siah1b, Tmem27, Ace2, Bmx, Pir, Figf, Piga, Asb11, Asb9
Downstream geneMospd2, Fancb, LOC627045, Glra2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183F03.bB6Ng01-183F03.g
ACCGA008976GA008977
length1,133999
definitionB6Ng01-183F03.b B6Ng01-183F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacattcctctacattataagtgccatttgtgccagcactatttg
ttgaaaatgctgtctttttttccactggatggttttagctcccttgtcaa
aaatcaattgaccataggtttgtgggttcattcctgggtcttcaattata
ttccattggtctacttgtctgctggtgtaccagtaccatgcagtttttaa
tcacaattgcattgaagtacagctttaggtcaggcatggtgattccacca
gagtttttttattttatcattgagacgaaattttgctatcctatgttttt
tgttattccagatgaattttcagttgccctttctaattggttgaagaata
gagttggaattttgaggggggttccttgaatttgtagattgcttttggca
agatagccctttttactatattggtcctttcaatccatgagcatgggaca
tcttttcatcttctgagatcatctttaatttctttcttcagagtcttgaa
gttcttatcatacaatctttcacttccttagttagagtcacaccaaggta
ttttataatatttgtgacctttgagaaagttgttgtttcccttatttctt
tctcagcctgtttatcctttgtgtagagcaaggccattgacttgtttgag
ttaattttatattcagctacttcattcaagctgtttatcaagtttaggag
ttctctggtggaaattttagggtcacttatatatactatcagatcatttg
caaaaagtgatatttttgacttcttcctttccaatttgtatcacattgat
ctccttttgttgtcgaattgctctggctacgatttcaagtacaatgttca
atagatagggagaaagtggggagccttgtctagtccctgattttagtgag
attgcttccagcttctcactatttacactgatcttggcctactggtttgc
tgtagaattggttttatcatgttaaggtatgggccttgaattcctggtct
tttccaagacttttatcacgaatgggtgttgaattttgtcaatgtttttc
tcagcatcctaacgagatgattatgtagtttttggtccttgtacttgctt
tatacagtggacattaccatgtaacagtgaact
gaattctttgaatgaaagccatttctaagttcatgctttcaatgtcctta
gcaactgttggtgcccagtgggtttacgtggccctttctacatgtttttt
aaaatataatcacatgtcacttttagccagcagccctcatcttgttaatc
cacatttctcagtctctgcttttatagctaagggtaaattgaagaaaaaa
aaagcaaaattctgcctgatgagtgtttcactcaatgaatagttttctta
ttctgtcatgtacacaatgaaatcactttagattcagacctttcttaaca
cttgaattatcttagcactctctttctaccctctgccttcctctttcatc
ttttataccctttcccgttcatcaaagataaaggacctatgaaatgaaat
ctttcctaaaactcaatatgtgctccctgagcctcacaatggtgttcacc
cacaaagtctctctaactgggcatcatcaaaaaggaaataaacagttaaa
attcgtttagttattgcataagtaataattaaatacatttaaaccaatat
ttgttaatgtggagtgatctggtagacaaggtgaccttcacagtgtttgc
agagatttttagttgtcattaattcgaagggtgttattgtggagcagtgt
gttgggaattatttaggggattgctgagctcattgcttacacagacaaag
aactgagccttcaggaaagacagaaaactaagccaaagaaagcaggaaag
taacagctttatctttttctggagggaacaggctttaagtatgaaagtca
gttaaatggatgatggatagggcaaattcattggctcctcccttttcccc
tcttggtcctgtttagatggatgccttccatgacttccgaagatcctcct
cactattgtcttctgggagcattgtaactccctcctatttcagaaagcat
gtgtttgcttattttgctatctatgttcatctaacttctttttcaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_161024987_161025979
seq2: B6Ng01-183F03.g_70_1068 (reverse)

seq1  CAGTTG-AAAAGGAGTTAGATGAACATAGATAGACAAATTAAGCAAACAC  49
      |||||| ||||| |||||||||||||||||||| |||| |||||||||||
seq2  CAGTTGAAAAAGAAGTTAGATGAACATAGATAG-CAAAATAAGCAAACAC  49

seq1  ATGCTTTCTGAAATGGGGGGGGGTTAC-ATGCTCCCAGAAGAC-ATAGTG  97
      |||||||||||||| || ||| ||||| ||||||||||||||| ||||||
seq2  ATGCTTTCTGAAATAGGAGGGAGTTACAATGCTCCCAGAAGACAATAGTG  99

seq1  AGGAGGATCTTCGGAAGTCATGG-AGGCATCCATCTAAACAGGACCAAGA  146
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGGAGGATCTTCGGAAGTCATGGAAGGCATCCATCTAAACAGGACCAAGA  149

seq1  GGGGAAAAGGGAGGAGCCAATGAA-TTGCCCTATCCATCATCCATTTAAC  195
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGGGAAAAGGGAGGAGCCAATGAATTTGCCCTATCCATCATCCATTTAAC  199

seq1  TGACTTTCATACTT-AAGCCTGTTCCCTCCAG-AAAAGATAAAGCTGTTA  243
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  TGACTTTCATACTTAAAGCCTGTTCCCTCCAGAAAAAGATAAAGCTGTTA  249

seq1  CTTTCCTGCTTTCTTTGGCTTAGTTTTCTGTCTTTCCTGAAGGCTCAGTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGCTTTCTTTGGCTTAGTTTTCTGTCTTTCCTGAAGGCTCAGTT  299

seq1  CTTTGTCTGTGTAAGCAATGAGCTCAGCAATCCCCTAAATAATTCCCAAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTGTGTAAGCAATGAGCTCAGCAATCCCCTAAATAATTCCCAAC  349

seq1  ACACTGCTCCACAATAACACCCTTCGAATTAATGACAACTAAAAATCTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCTCCACAATAACACCCTTCGAATTAATGACAACTAAAAATCTCT  399

seq1  GCAAACACTGTGAAGGTCACCTTGTCTACCAGATCACTCCACATTAACAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACACTGTGAAGGTCACCTTGTCTACCAGATCACTCCACATTAACAA  449

seq1  ATATTGGTTTAAATGTATTTAATTATTACTTATGCAATAACTAAACGAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGTTTAAATGTATTTAATTATTACTTATGCAATAACTAAACGAAT  499

seq1  TTTAACTGTTTATTTCCTTTTTGATGATGCCCAGTTAGAGAGACTTTGTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGTTTATTTCCTTTTTGATGATGCCCAGTTAGAGAGACTTTGTG  549

seq1  GGTGAACACCATTGTGAGGCTCAGGGAGCACATATTGAGTTTTAGGAAAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACACCATTGTGAGGCTCAGGGAGCACATATTGAGTTTTAGGAAAG  599

seq1  ATTTCATTTCATAGGTCCTTTATCTTTGATGAACGGGAAAGGGTATAAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTCATAGGTCCTTTATCTTTGATGAACGGGAAAGGGTATAAAA  649

seq1  GATGAAAGAGGAAGGCAGAGGGTAGAAAGAGAGTGCTAAGATAATTCAAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAGAGGAAGGCAGAGGGTAGAAAGAGAGTGCTAAGATAATTCAAG  699

seq1  TGTTAAGAAAGGTCTGAATCTAAAGTGATTTCATTGTGTACATGACAGAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGAAAGGTCTGAATCTAAAGTGATTTCATTGTGTACATGACAGAA  749

seq1  TAAGAAAACTATTCATTGAGTGAAACACTCATCAGGCAGAATTTTGCTTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAACTATTCATTGAGTGAAACACTCATCAGGCAGAATTTTGCTTT  799

seq1  TTTTTTCTTCAATTTACCCTTAGCTATAAAAGCAGAGACTGAGAAATGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTCAATTTACCCTTAGCTATAAAAGCAGAGACTGAGAAATGTG  849

seq1  GATTAACAAGATGAGGGCTGCTGGCTAAAAGTGACATGTGATTATATTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACAAGATGAGGGCTGCTGGCTAAAAGTGACATGTGATTATATTTT  899

seq1  AAAAAACATGTAGAAAGGGCCACGTAAACCCACTGGGCACCAACAGTTGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACATGTAGAAAGGGCCACGTAAACCCACTGGGCACCAACAGTTGC  949

seq1  TAAGGACATTGAAAGCATGAACTTAGAAATGGCTTTCATTCAAAGAATTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACATTGAAAGCATGAACTTAGAAATGGCTTTCATTCAAAGAATTC  999