BAC Information

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BAC

Clone NameB6Ng01-183H05
ChromosomeX (Build37)
Map Location 158,102,596 - 158,103,718
singlet/doubletsinglet
Overlap genenone
Upstream genePpef1, Rs1, Gja6, Scml2, LOC414364, Prkaca-ps1
Downstream geneRai2, Gm47, Nhs, Reps2, LOC654358, LOC100041557
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183H05.bB6Ng01-183H05.g
ACCGA009070GA009071
length1,2051,128
definitionB6Ng01-183H05.b B6Ng01-183H05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatggggttatttgaatt
tctggagttcagcttcttgagctctttatatatatttgatattagtgctt
cttctcccactgaggccaaacaaggcagcccagctagaagaacctatccc
atagacaggcaacagcttttgagatagcccccagtttgtttggacctgca
tgaaggccaagctgcacatctgctacatatggtggggtgctgggggctct
aggtccagcccatgtatgctctttggctggtggttcagcctttgagagcc
cccaaggatccatgttgactctgttggtctttctgaggagttcctattcc
cctcgggccctaaatccttcctcctattcgtccataagggtccccaacct
ccatccagtgtttgactgtggctgtctgtatatgtctgagtcagttgctg
agtggaacctcttagaggacaacatgcttctgtctgcaagcatagtagag
tatcattaacagtgttagtgattggtgcttgcccattgtatgggtctcaa
gttgagccagttattggttggccattcagtctctaccccctcttccatgc
ctgggcagagcttcttaatgtctacctttcttattttctttctcaggaca
gaaatatcaaggttaaggacctacaagggcactagaaattggtacttctg
ctatctggattgggggctccagaatacctggttagggatcagaatattct
tagcctggcaagaggccagagtgccatgaagcttgcatttggggtgtgag
gatggtgaagactgccccctaggctcctgaggatgttgtatacacagttg
ggaagccaagtattatatgcttcactttcaggaagagagcaggtgagaag
ctggtttaggagatatgtgcctaggagccatcaatattgtctgaaagtat
acagaaagtgattaacagtcacgtttgaatctccaatcttcctctgatcc
tgttctcctagggccaccatgtagtactttcctcttacattggtcagact
tttttttttaacccaaggaaaatttgcagctacaggctatttgtctctta
acgaagctactaggacagggagtgtgatcctagtcttatccactcattgg
ctcttcaggccctccatgcctaactctctaatgtaatcaagtgaagtctc
agtat

gaattctggtatgtgcttggactgtgccagccagtaggtgatggatacca
ctttggttatgcttgaaaatgctgtagcctgcaattatattgtgtattgt
gaaaatccaagattgatgaggtgtacctggagcaatagtttgagtcttcc
cagaccaggtgcaggttatgcaagtgaacaaactttcagatgatttttag
cttcggccatctatgccatctgaaagattctcagccaaaacctgcttaac
caagccaacactgagtccttgacccatagaactgagagagacaataaatg
gttgttattgtttgaagccactgagtttgtgggtgatttttctgtgcatt
aatgaataactagaacaggtaactaggtgctgtcttaacctagtgtccgg
caatcagattttctcagttggaaatttaaagcaaagataagtagtgaaga
taataacttcgaggaggaccgacagataagtgatgaacataaaacaagaa
gccaacattcccaattaaaaggttacagggagatatatcattggagaatt
atgtcttcatttctaatgctctacttgaatgtggctattttctcccctca
ctagccactatttctcggtagctctgctgctttctcttttcttttttaaa
attaattgtacatcccaatcactgctcccattccctgtcccccatcacat
ggtccctcccatacctccttcctttctcctctgagagggtgggcccctct
gtgtatccatccacctcccatcccgaagcatcaagtttctgctttagata
cttctctcccatactgattaactacacaactagtttctctaaactgctaa
tacatctctactggaggcctactgggaaatcttagactcaagatggccca
aagcaaactcttgacttcctctgaatgtttctcgttttgcagtctttttt
caactcagagaaatacaaaccaaacaaacccagatggagcagaattacac
tttagagttcatattctgaccacctcaatttacttcacatgttgggttta
ctaggcaaattcctttgggcttgactggcaaaccatagttcacattcatc
ttctcacgatcatccgaatctttactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_158102596_158103718
seq2: B6Ng01-183H05.g_67_1194

seq1  GAATTCTGGTATGTGCTTGGACTGTGCCAGCCAGTAGGTGATGGATACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTATGTGCTTGGACTGTGCCAGCCAGTAGGTGATGGATACCA  50

seq1  CTTTGGTTATGCTTGAAAATGCTGTAGCCTGCAATTATATTGTGTATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTATGCTTGAAAATGCTGTAGCCTGCAATTATATTGTGTATTGT  100

seq1  GAAAATCCAAGATTGATGAGGTGTACCTGGAGCAATAGTTTGAGTCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCAAGATTGATGAGGTGTACCTGGAGCAATAGTTTGAGTCTTCC  150

seq1  CAGACCAGGTGCAGGTTATGCAAGTGAACAAACTTTCAGATGATTTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAGGTGCAGGTTATGCAAGTGAACAAACTTTCAGATGATTTTTAG  200

seq1  CTTCGGCCATCTATGCCATCTGAAAGATTCTCAGCCAAAACCTGCTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGCCATCTATGCCATCTGAAAGATTCTCAGCCAAAACCTGCTTAAC  250

seq1  CAAGCCAACACTGAGTCCTTGACCCATAGAACTGAGAGAGACAATAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAACACTGAGTCCTTGACCCATAGAACTGAGAGAGACAATAAATG  300

seq1  GTTGTTATTGTTTGAAGCCACTGAGTTTGTGGGTGATTTTTCTGTGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATTGTTTGAAGCCACTGAGTTTGTGGGTGATTTTTCTGTGCATT  350

seq1  AATGAATAACTAGAACAGGTAACTAGGTGCTGTCTTAACCTAGTGTCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATAACTAGAACAGGTAACTAGGTGCTGTCTTAACCTAGTGTCCGG  400

seq1  CAATCAGATTTTCTCAGTTGGAAATTTAAAGCAAAGATAAGTAGTGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGATTTTCTCAGTTGGAAATTTAAAGCAAAGATAAGTAGTGAAGA  450

seq1  TAATAACTTCGAGGAGGACCGACAGATAAGTGATGAACATAAAACAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTTCGAGGAGGACCGACAGATAAGTGATGAACATAAAACAAGAA  500

seq1  GCCAACATTCCCAATTAAAAGGTTACAGGGAGATATATCATTGGAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACATTCCCAATTAAAAGGTTACAGGGAGATATATCATTGGAGAATT  550

seq1  ATGTCTTCATTTCTAATGCTCTACTTGAATGTGGCTATTTTCTCCCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCATTTCTAATGCTCTACTTGAATGTGGCTATTTTCTCCCCTCA  600

seq1  CTAGCCACTATTTCTCGGTAGCTCTGCTGCTTTCTCTTTTCTTTTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCACTATTTCTCGGTAGCTCTGCTGCTTTCTCTTTTCTTTTTTAAA  650

seq1  ATTAATTGTACATCCCAATCACTGCTCCCATTCCCTGTCCCCCATCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGTACATCCCAATCACTGCTCCCATTCCCTGTCCCCCATCACAT  700

seq1  GGTCCCTCCCATACCTCCTTCCTTTCTCCTCTGAGAGGGTGGGCCCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTCCCATACCTCCTTCCTTTCTCCTCTGAGAGGGTGGGCCCCTCT  750

seq1  GTGTATCCATCCACCTCCCATCCCGAAGCATCAAGTTTCTGCTTTAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCCATCCACCTCCCATCCCGAAGCATCAAGTTTCTGCTTTAGATA  800

seq1  CTTCTCTCCCATACTGATTAACTACACAACTAGTTTTCTCTAAACTGCT-  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  CTTCTCTCCCATACTGATTAACTACACAACTAG-TTTCTCTAAACTGCTA  849

seq1  ATACATCTCTACTGGAGGCCTACTGGG-AATCTTAGACTCAAGATGGCCC  898
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATACATCTCTACTGGAGGCCTACTGGGAAATCTTAGACTCAAGATGGCCC  899

seq1  AAAGCAAACTCTTGACTTCCTCTGAATGTTTCTCG-TTTGCAGTCTTTTT  947
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAGCAAACTCTTGACTTCCTCTGAATGTTTCTCGTTTTGCAGTCTTTTT  949

seq1  TCAACTCAGGAGAAAATACAAAACAAAACAAACCAAGATGGAGCAGAA-T  996
      |||||||| ||| |||||| |||| ||||||||| ||||||||||||| |
seq2  TCAACTCA-GAG-AAATAC-AAACCAAACAAACCCAGATGGAGCAGAATT  996

seq1  ACACTTTAGAG-TCATA-TCTGA-CACCTCAATTTACTTCACATGTTGGG  1043
      ||||||||||| ||||| ||||| ||||||||||||||||||||||||||
seq2  ACACTTTAGAGTTCATATTCTGACCACCTCAATTTACTTCACATGTTGGG  1046

seq1  TTTACTAG--CAATTTCTTTGGGTTTGACCTGCAAAACATAG-TCACA-T  1089
      ||||||||   |||| ||||||| |||||  ||||| ||||| ||||| |
seq2  TTTACTAGGCAAATTCCTTTGGGCTTGACTGGCAAACCATAGTTCACATT  1096

seq1  CATCTTCTCACCAATCATCCCACATCTTTACTAC  1123
      |||||||||| | ||||||| | |||||||||||
seq2  CATCTTCTCA-CGATCATCCGA-ATCTTTACTAC  1128


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