BAC Information

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BAC

Clone NameB6Ng01-184C13
ChromosomeX (Build37)
Map Location 56,796,980 - 56,947,810
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC631581, LOC631621, 4930550L24Rik, Fgf13
Downstream geneF9, EG434782, Mcf2, Atp11c, LOC666517, LOC631784, LOC100039611, LOC100039621, Gm715, Hspa9-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184C13.bB6Ng01-184C13.g
ACCGA009603GA009604
length1,0611,023
definitionB6Ng01-184C13.b B6Ng01-184C13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,796,980 - 56,798,046)(56,946,961 - 56,947,810)
sequence
gaattcctcctagttttaggaatcaagtgggtcagaacaaactatgcacc
agagagatgcccattcttcaaggagttcagaatatttcatgctttctttc
ctagaaatggaaatccagcaagcttgcatttgtaaataagcaaggagttt
tagctctgatgcaggtatggccacgggtacatagcaatttggtgcttata
aatgttatctgtgtgcatatacagaaatttccaaggctgcaatgcaaaaa
aaaaaaaaaaaaaagctgttagtgcacttttaagactcatgtaactggag
gctacagttgaaattctgccttgcaaaaattctacagaaatgtatttaga
agtgattttactcctcttcaataaaagcaactctaaacacctgaattctg
gatgatacaattttttaaagttttcttttccccatgcaacatgaaaaata
tggcaacctgcttctcccacataacttcataggtgccttttaaggtttta
ctcatatgttatcttctcagcgagtctgcctctgatcaacaaagtcataa
ctgcaaccatttacagtgtgcatggggtgggggatggagacatatgcaca
cacaaattaaagtcaaaagggaagaacctttattctacttactactatat
cattaattgtagaataatgactgccgtataaaatattgtactggctagtt
ttatgtcaacttaatgttaagctagagctctttgagaagagggaacagca
agtgtgaaaataaacccataaaattggcctgtgagcaagcctatagtaca
ttttttttttttaatcagaggctaatgtgggaggacccagacaatgtagg
tggtatcatccctggtctggtggtcctagagcatgtaagaagcaggctaa
gcaagagaacaagacagtaagcagcatgtttccacgcctctgcatcagtc
cctgcatcccagcttactgccttgatttctaccctgacttccctggatga
tgactgcaaaggtatagatgaagtaaccctgtctctcacagtatttgttc
atagttgcctc

gaattcaaccaggagcagaggcagagaccatggaagaaagctgcttattt
atttggactttagattttgcccagctttttgtataccacctagcctctcc
agcctccagataggatcagtgagatgggtcttcttacatcaattactaat
caagaaatattccttagacattcccacaagacattgtgattgaggcattc
cctaaattgagactatctcagataactctgagctgtgtgaagttgatagc
tgaagctaactgggaaaggtcatttttaggataacagtcaaattcacttg
attctctttctgtaccttttaactttctgacttcattattttttgtctcc
acttctcctggttgacctggaaagatgagcacaggctgaagaaacaggcc
ctccactgcaaattgatttaataatatatttaaagagagactttctgttg
aggatctattgtataccaagcatcctagtttcatttctgttgctatgaca
aaataccctgaccaaaagtaactaaggggagaaagggctcagggaagtta
agcagaagaaactaaggtcataacacatccacaatcaaaagagaaataaa
tacatgaatacttcatatttaggactcaaattcaggtaatgatgccaccc
aaactgggctggttctttccacatcaattaaggcaaccaacacaatcccc
agggacatgtccacaggctagcttgatcagataagccttcatttagacac
tctccccaggtgactttagattgtggcacgttgaaaattaaaactaacgc
atcaagttttatgccagttacttttatacagtttacacattccagtaatt
ctgtgagaaaggtgtcatcattatactgatatattgatgagaaaacccgc
acttaaaaaaatggaattgtttttttttcaaggctcaactaggcaactgg
gcaacaccaaactgtttattctccaaattctggtttgtttcctttaacca
caaccacctaaagcctagaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_56796980_56798046
seq2: B6Ng01-184C13.b_43_1103

seq1  GAATTCCTCCTAGTTTTAGGAATCAAGTGGGTCAGAACAAACTATGCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTAGTTTTAGGAATCAAGTGGGTCAGAACAAACTATGCACC  50

seq1  AGAGAGATGCCCATTCTTCAAGGAGTTCAGAATATTTCATGCTTTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATGCCCATTCTTCAAGGAGTTCAGAATATTTCATGCTTTCTTTC  100

seq1  CTAGAAATGGAAATCCAGCAAGCTTGCATTTGTAAATAAGCAAGGAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATGGAAATCCAGCAAGCTTGCATTTGTAAATAAGCAAGGAGTTT  150

seq1  TAGCTCTGATGCAGGTATGGCCACGGGTACATAGCAATTTGGTGCTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGATGCAGGTATGGCCACGGGTACATAGCAATTTGGTGCTTATA  200

seq1  AATGTTATCTGTGTGCATATACAGAAATTTCCAAGGCTGCAATGCAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATCTGTGTGCATATACAGAAATTTCCAAGGCTGCAATGCAAAAA  250

seq1  AAAAAAAAAAAAAAGCTGTTAGTGCACTTTTAAGACTCATGTAACTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGCTGTTAGTGCACTTTTAAGACTCATGTAACTGGAG  300

seq1  GCTACAGTTGAAATTCTGCCTTGCAAAAATTCTACAGAAATGTATTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTTGAAATTCTGCCTTGCAAAAATTCTACAGAAATGTATTTAGA  350

seq1  AGTGATTTTACTCCTCTTCAATAAAAGCAACTCTAAACACCTGAATTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTTACTCCTCTTCAATAAAAGCAACTCTAAACACCTGAATTCTG  400

seq1  GATGATACAATTTTTTAAAGTTTTCTTTTCCCCATGCAACATGAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATACAATTTTTTAAAGTTTTCTTTTCCCCATGCAACATGAAAAATA  450

seq1  TGGCAACCTGCTTCTCCCACATAACTTCATAGGTGCCTTTTAAGGTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAACCTGCTTCTCCCACATAACTTCATAGGTGCCTTTTAAGGTTTTA  500

seq1  CTCATATGTTATCTTCTCAGCGAGTCTGCCTCTGATCAACAAAGTCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATGTTATCTTCTCAGCGAGTCTGCCTCTGATCAACAAAGTCATAA  550

seq1  CTGCAACCATTTACAGTGTGCATGGGGTGGGGGATGGAGACATATGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACCATTTACAGTGTGCATGGGGTGGGGGATGGAGACATATGCACA  600

seq1  CACAAATTAAAGTCAAAAGGGAAGAACCTTTATTCTACTTACTACTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATTAAAGTCAAAAGGGAAGAACCTTTATTCTACTTACTACTATAT  650

seq1  CATTAATTGTAGAATAATGACTGCCGTATAAAATATTGTACTGGCTAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTGTAGAATAATGACTGCCGTATAAAATATTGTACTGGCTAGTT  700

seq1  TTATGTCAACTTAATGTTAAGCTAGAGCTCTTTGAGAAGAGGGAACAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCAACTTAATGTTAAGCTAGAGCTCTTTGAGAAGAGGGAACAGCA  750

seq1  AGTGTGAAAATAAACCCATAAAATTGGCCTGTGAGCAAGCCTATAGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAAAATAAACCCATAAAATTGGCCTGTGAGCAAGCCTATAGTACA  800

seq1  -TTTTTTTTTTTAATCAGAGGCTAATGTGGGAGGACCCAGACAATGTAGG  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAATCAGAGGCTAATGTGGGAGGACCCAGACAATGTAGG  850

seq1  TGGTATCATCCCTGGTCTGGTGGTCCTAGAGCATGTAAGAAAGCAGGCTA  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGGTATCATCCCTGGTCTGGTGGTCCTAGAGCATGTAAG-AAGCAGGCTA  899

seq1  AGCAAGAGAACAAGACAGTAAGCAGCATGTTTCCACGCCTCTGCATCAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGAACAAGACAGTAAGCAGCATGTTTCCACGCCTCTGCATCAGT  949

seq1  CCCTGCATCCCAGCTTACTGCCTTGAATTTCTACCCTGACTTCCCTGGAT  999
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCCTGCATCCCAGCTTACTGCCTTG-ATTTCTACCCTGACTTCCCTGGAT  998

seq1  GATGGACTGCAAAGGTATAAGATGAAGTAAACCCTGTCCTCCACAAGTTA  1049
      ||| |||||||||||||| ||||||||| |||||||||   ||| |||  
seq2  GAT-GACTGCAAAGGTAT-AGATGAAGT-AACCCTGTCTCTCAC-AGT--  1042

seq1  ATTTGTTCATAG-TGCCTC  1067
      |||||||||||| ||||||
seq2  ATTTGTTCATAGTTGCCTC  1061


seq1: chrX_56946961_56947810
seq2: B6Ng01-184C13.g_66_915 (reverse)

seq1  AATTACTGGAATGTGTAAACTGTATAAAAGTAACTGGCATAAAACTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTGGAATGTGTAAACTGTATAAAAGTAACTGGCATAAAACTTGAT  50

seq1  GCGTTAGTTTTAATTTTCAACGTGCCACAATCTAAAGTCACCTGGGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTAGTTTTAATTTTCAACGTGCCACAATCTAAAGTCACCTGGGGAGA  100

seq1  GTGTCTAAATGAAGGCTTATCTGATCAAGCTAGCCTGTGGACATGTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAAATGAAGGCTTATCTGATCAAGCTAGCCTGTGGACATGTCCCT  150

seq1  GGGGATTGTGTTGGTTGCCTTAATTGATGTGGAAAGAACCAGCCCAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTGTGTTGGTTGCCTTAATTGATGTGGAAAGAACCAGCCCAGTTT  200

seq1  GGGTGGCATCATTACCTGAATTTGAGTCCTAAATATGAAGTATTCATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCATCATTACCTGAATTTGAGTCCTAAATATGAAGTATTCATGTA  250

seq1  TTTATTTCTCTTTTGATTGTGGATGTGTTATGACCTTAGTTTCTTCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTCTTTTGATTGTGGATGTGTTATGACCTTAGTTTCTTCTGCT  300

seq1  TAACTTCCCTGAGCCCTTTCTCCCCTTAGTTACTTTTGGTCAGGGTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCCTGAGCCCTTTCTCCCCTTAGTTACTTTTGGTCAGGGTATTT  350

seq1  TGTCATAGCAACAGAAATGAAACTAGGATGCTTGGTATACAATAGATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAGCAACAGAAATGAAACTAGGATGCTTGGTATACAATAGATCCT  400

seq1  CAACAGAAAGTCTCTCTTTAAATATATTATTAAATCAATTTGCAGTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAAAGTCTCTCTTTAAATATATTATTAAATCAATTTGCAGTGGAG  450

seq1  GGCCTGTTTCTTCAGCCTGTGCTCATCTTTCCAGGTCAACCAGGAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTTTCTTCAGCCTGTGCTCATCTTTCCAGGTCAACCAGGAGAAGT  500

seq1  GGAGACAAAAAATAATGAAGTCAGAAAGTTAAAAGGTACAGAAAGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAAAAAATAATGAAGTCAGAAAGTTAAAAGGTACAGAAAGAGAAT  550

seq1  CAAGTGAATTTGACTGTTATCCTAAAAATGACCTTTCCCAGTTAGCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAATTTGACTGTTATCCTAAAAATGACCTTTCCCAGTTAGCTTCA  600

seq1  GCTATCAACTTCACACAGCTCAGAGTTATCTGAGATAGTCTCAATTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCAACTTCACACAGCTCAGAGTTATCTGAGATAGTCTCAATTTAGG  650

seq1  GAATGCCTCAATCACAATGTCTTGTGGGAATGTCTAAGGAATATTTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCTCAATCACAATGTCTTGTGGGAATGTCTAAGGAATATTTCTTG  700

seq1  ATTAGTAATTGATGTAAGAAGACCCATCTCACTGATCCTATCTGGAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAATTGATGTAAGAAGACCCATCTCACTGATCCTATCTGGAGGCT  750

seq1  GGAGAGGCTAGGTGGTATACAAAAAGCTGGGCAAAATCTAAAGTCCAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGCTAGGTGGTATACAAAAAGCTGGGCAAAATCTAAAGTCCAAAT  800

seq1  AAATAAGCAGCTTTCTTCCATGGTCTCTGCCTCTGCTCCTGGTTGAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCAGCTTTCTTCCATGGTCTCTGCCTCTGCTCCTGGTTGAATTC  850


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