BAC Information

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BAC

Clone NameB6Ng01-184J18
ChromosomeX (Build37)
Map Location 28,290,595 - 28,291,699
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039248, LOC100039073, EG664890, LOC664898, LOC22526, EG664906, LOC664917, LOC100039324, LOC100039334, LOC100039096, EG664923, LOC100039364, LOC100039377
Downstream geneLOC100039386, LOC100039127, EG664944, LOC100039423, LOC100039145, LOC664951, LOC100042071, LOC664958, LOC664964, LOC100042087, LOC100039171, LOC100042103, LOC100042109, LOC100042115, LOC100042122
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184J18.bB6Ng01-184J18.g
ACCGA009941GA009942
length9681,105
definitionB6Ng01-184J18.b B6Ng01-184J18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtggaatttttagggtcacttatatatacaatcatatcat
ctgcaaatagtgatattttgacgtctttccaatttttacccctgtgatct
ccttttgttgtagcattgctctggctaggacttcaagtactatattgaat
aggtagggagaaagtgagcagccttgtctattccctgactttagtgggat
tgcttccagtttcactccatttggtttgatatcagctactggtttgctgt
atattgcttttattttgtttaggtatgggccttcaattcctgatctttct
atgtcttttatcatgaagggttgttgaattttgtcaaatgctttctcagc
acccaatgatattatcatgtgatttttgctttggagtttgtttatgtagt
ggactattttttaaattgttgctgtaggtgtgatatgatatgggctaaat
tgcgatagtgttgacctggcgttgattccactaggggttgacagaggaaa
atgggattagaaaattctaaacaggcatttgtctgcaatcttcaagagct
gcttcaggctagaggagtagggattgaagaacaattgttagaatattttt
cagattacattgatagctttccgtatattaaaccatccctgcatccctgg
gatgtagccttcttggtcttgatggatgatcattttgatgtgttcttgga
tttggttttcgaggattttattgagaatattttcatcgatatccataagg
gaaaattgatctgaagttttctttcttagatggatctttgtgtggtttag
gtattagagtatttgtggcttcatataatgaattgggtagagtaccttct
gttttctattttgtggactagtatgaggagagttggaattaggtcttctt
tgaaggtctgatagaacctaaacgcatctggtcctgggctttattttttt
ttggggggggggggatac
gaattcaaaggcccatagtgaaatgataggttatattgaggtaagtgttc
tcaataatggagatcagattgatatctaagatcctaacagccacaacaaa
ttctgttgatttcactgatacatgaatacattgcatgatgttgactaagt
aatgtgcaagatccttactgccacctgaaataatgtggatatcagtgatt
tatcctgcaactaaatgaggcaattatgataatgatttattcttctctgt
gatttgaggttgatatcattaatatataactgtctacacaccctatggga
ttgccgctaggtccatgctaccattcgcaacctggttgccagtgatccct
gctgtccctggttaccatgttaatatcactattacatagttcctgtagaa
actatggtgatatcaatcatccattctgcctcaagtagccatgtttaaac
ccaaagttcatgatgcttcttggattattgttaatgtcaaggatccctga
agctagcagagacttaggtgaaattttagataaattctgctgtgtcacat
catgttgaattacatgttcagagatatattatgtggaggtcacatatagt
gtggcaatggacactgttgcttgttacatatactttaagcatccatcatc
catggcggtgataccttctgccttatgggaccacattaatatcactgtct
cctactgccaattgaatcattgttgatgtctgttatcaatgcttctgtca
aatttatgtcaagtatcctgctacctgtaaacattttgatatcatgattc
aaagtgccactaggggagtttctttacatgttcatatctacatttgaaac
tctcttgatatccctgggaaactgatacaatggtatattttcagattcct
actcacacaggcaaccaggcagtgagtgatcactactaacactttgggaa
caaattgatatcagtgatcccaatgctagggaaactgggcaagggaaatg
ggaaattgatgtcactcatccatgctgccactggtaaccatgtggagatc
ctcagtcagtgtctttaaagatgtcgtgatgtctatgataatcaacagaa
taatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_28290595_28291699
seq2: B6Ng01-184J18.g_67_1171

seq1  GAATTCAAAGGCCCATAGTGAAATGATAGGTTATATTGAGGTAAGTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGCCCATAGTGAAATGATAGGTTATATTGAGGTAAGTGTTC  50

seq1  TCAATAATGGAGATCAGATTGATATCTAAGATCCTAACAGCCACAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATGGAGATCAGATTGATATCTAAGATCCTAACAGCCACAACAAA  100

seq1  TTCTGTTGATTTCACTGATACATGAATACATTGCATGATGTTGACTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTGATTTCACTGATACATGAATACATTGCATGATGTTGACTAAGT  150

seq1  AATGTGCAAGATCCTTACTGCCACCTGAAATAATGTGGATATCAGTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCAAGATCCTTACTGCCACCTGAAATAATGTGGATATCAGTGATT  200

seq1  TATCCTGCAACTAAATGAGGCAATTATGATAATGATTTATTCTTCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGCAACTAAATGAGGCAATTATGATAATGATTTATTCTTCTCTGT  250

seq1  GATTTGAGGTTGATATCATTAATATATAACTGTCTACACACCCTATGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGGTTGATATCATTAATATATAACTGTCTACACACCCTATGGGA  300

seq1  TTGCCGCTAGGTCCATGCTACCATTCGCAACCTGGTTGCCAGTGATCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGCTAGGTCCATGCTACCATTCGCAACCTGGTTGCCAGTGATCCCT  350

seq1  GCTGTCCCTGGTTACCATGTTAATATCACTATTACATAGTTCCTGTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCCTGGTTACCATGTTAATATCACTATTACATAGTTCCTGTAGAA  400

seq1  ACTATGGTGATATCAATCATCCATTCTGCCTCAAGTAGCCATGTTTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGTGATATCAATCATCCATTCTGCCTCAAGTAGCCATGTTTAAAC  450

seq1  CCAAAGTTCATGATGCTTCTTGGATTATTGTTAATGTCAAGGATCCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTCATGATGCTTCTTGGATTATTGTTAATGTCAAGGATCCCTGA  500

seq1  AGCTAGCAGAGACTTAGGTGAAATTTTAGATAAATTCTGCTGTGTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCAGAGACTTAGGTGAAATTTTAGATAAATTCTGCTGTGTCACAT  550

seq1  CATGTTGAATTACATGTTCAGAGATATATTATGTGGAGGTCACATATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGAATTACATGTTCAGAGATATATTATGTGGAGGTCACATATAGT  600

seq1  GTGGCAATGGACACTGTTGCTTGTTACATATACTTTAAGCATCCATCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAATGGACACTGTTGCTTGTTACATATACTTTAAGCATCCATCATC  650

seq1  CATGGCGGTGATACCTTCTGCCTTATGGGACCACATTAATATCACTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCGGTGATACCTTCTGCCTTATGGGACCACATTAATATCACTGTCT  700

seq1  CCTACTGCCAATTGAATCATTGTTGATGTCTGTTATCAATGCTTCTGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGCCAATTGAATCATTGTTGATGTCTGTTATCAATGCTTCTGTCA  750

seq1  AATTTATGTCAAGTATCCTGCTACCTGTAAACATTTTGATATCATGATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATGTCAAGTATCCTGCTACCTGTAAACATTTTGATATCATGATTC  800

seq1  AAAGTGCCACTAGGGGAGTTTCTTTACATGTTCATATCTACATTTGAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCCACTAGGGGAGTTTCTTTACATGTTCATATCTACATTTGAAAC  850

seq1  TCTCTTGATATCCCT-GGAAACTGATACAATGGTATA-TTTCAGATTCCT  898
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  TCTCTTGATATCCCTGGGAAACTGATACAATGGTATATTTTCAGATTCCT  900

seq1  ACTCACACAGGCAACCAGGCAGTGAGTGATCACTACTAACACTTT-GGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTCACACAGGCAACCAGGCAGTGAGTGATCACTACTAACACTTTGGGAA  950

seq1  CAAATTGATATCAGTGATCCCAAATGCTAGGGAAACTGGCCAAGGGAATT  997
      ||||||||||||||||||||| ||||||||||||||||| |||||||| |
seq2  CAAATTGATATCAGTGATCCC-AATGCTAGGGAAACTGGGCAAGGGAAAT  999

seq1  GGGAAATTGATGTCACTCATCCATGCTGCCACTGGTAACCATGTTGAGAT  1047
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGAAATTGATGTCACTCATCCATGCTGCCACTGGTAACCATGTGGAGAT  1049

seq1  CCTCAGTCAGTGTCTTTAAAGATGTCGTGATGTCTATGATAAATCAACAA  1097
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  CCTCAGTCAGTGTCTTTAAAGATGTCGTGATGTCTATGAT-AATCAAC-A  1097

seq1  GAATAATG  1105
      ||||||||
seq2  GAATAATG  1105