BAC Information

Click to search

BAC

Clone NameB6Ng01-186A04
ChromosomeX (Build37)
Map Location 47,338,198 - 47,339,352
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040295, Enox2, 1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344
Downstream geneOlfr1323, EG665816, Olfr1324, LOC100041788, 6720401G13Rik, 2610018G03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186A04.bB6Ng01-186A04.g
ACCGA010968GA010969
length1,178856
definitionB6Ng01-186A04.b B6Ng01-186A04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaagccacaagttcttggtcctggaatgtgccaggcatgggct
tcattttgtcacatgggaaataaatccattaagaaggtattggctgttct
tataatattaatatcactgttgcacccatgggcatgtttttctatgtagg
tcattattttatcttgtattgttcatggctgggtaagattagtggctgct
tttctccttcggtagtgtcatgtgaaattcaaatttcaatttttaatttg
gacctcaccaaagaattaaggaaagacctcttagaccaaaatggccaaga
gatgatgggtcttttttagtttcactcacatattatattgatatttaaaa
tttaatgaacataatgttatgatttgatatatgctatgcacacaaagtat
agcaataaaattagcatagaaaagttcctatctatgaatatttttgtttt
tgatatagaaaatgatttaaaatttataatatcacaaaaatacaccattg
ctgttgatttaagcagttatattttagacttttaaaagtatagatgtatt
tcaaggtcttagtttcttttctactagaatttaaaagaaaaagtacttta
atgatatttaatatgttccagaacaaagaaaaaggaaagactcaaatgcc
aaaactgagaaatcataattaattctttattattgccaataaaagatatc
aaattaaatgctaacaaatagaggacttagccccattaaaagagaaaagt
aaaccaaggtgataagtttcatgatggaaaaatttaaaagattaaatatt
gggaaatggagcacagttttatcaaataaaatctgacaataatttcctta
aataacattaattttataaaattttcaataaatatgattaatcaaaacag
attgaaacagtgaaaaaatagtaaaattagaattttagaaaatctctatt
atcctgtttactggttaagaccactgaagaaggtattaccaatgtcaagg
aatgcagtcaatagggtctggtaatcacttctgacatttttgttatttgg
ggtggcacctctagtataactaggaaaaagctagaagataaggatattta
aatattggaaacataaaacggtttcattatccatgggacattgattacat
tacctgtaagataatacgatgtgaacaa
gaattctgggtacccctgcatttggagcaaagatgttcagaattgagagt
tcttcttggtagatttttccttagatgagtatgaagtgtccttccttatc
gtttttgatgactttcgtttgaaagtcaattttctccaatattagaatgg
ctactgcatcttgtttcttgggaccatttgcatggaaaattgtgttgaag
cactttactctgaggaagtgtttgtctttgacactggggtgcttttccct
tgtgcagcaaaatgttcctgtttgcatatccagtctgttaatgtcttttt
attggagaattgagtccacttatattaagagagactaaggaatagagatt
gttgctctctgttattattgatgttatttttgtttctgtggttctctttt
actgggtttgttaaaagaagattactttcttgctttctgaagggtgtagt
ttccttccatgtgttgttgttttccatcaatcatcctttgtagggctgga
tatgtggaaagatattgtgtaaatttggttttatcatggaatgtcttggt
ttctacctctatggtaattgacagttttgctgcatataatagtctgtgct
gtcatttgtgttcctttagggtctgtatgagatctaagcagaatcttcta
gcttttggagtctattgtgagaagtttggtgtaatttctgataggtctgc
cttcatatgttacttgacctttttccctttaatgctttttaatattcttt
gtttagtgcatttgatcttttgattatatgttccttttctggtccactgt
atttggggttctgttgaccttcttgtatgttcatgggcaattctttcttt
tgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_47338198_47339352
seq2: B6Ng01-186A04.b_44_1221

seq1  GAATTCTTAAGCCACAAGTTCTTGGTCCTGGAATGTGCCAGGCATGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGCCACAAGTTCTTGGTCCTGGAATGTGCCAGGCATGGGCT  50

seq1  TCATTTTGTCACATGGGAAATAAATCCATTAAGAAGGTATTGGCTGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGTCACATGGGAAATAAATCCATTAAGAAGGTATTGGCTGTTCT  100

seq1  TATAATATTAATATCACTGTTGCACCCATGGGCATGTTTTTCTATGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTAATATCACTGTTGCACCCATGGGCATGTTTTTCTATGTAGG  150

seq1  TCATTATTTTATCTTGTATTGTTCATGGCTGGGTAAGATTAGTGGCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTTTATCTTGTATTGTTCATGGCTGGGTAAGATTAGTGGCTGCT  200

seq1  TTTCTCCTTCGGTAGTGTCATGTGAAATTCAAATTTCAATTTTTAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTCGGTAGTGTCATGTGAAATTCAAATTTCAATTTTTAATTTG  250

seq1  GACCTCACCAAAGAATTAAGGAAAGACCTCTTAGACCAAAATGGCCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCACCAAAGAATTAAGGAAAGACCTCTTAGACCAAAATGGCCAAGA  300

seq1  GATGATGGGTCTTTTTTAGTTTCACTCACATATTATATTGATATTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGGGTCTTTTTTAGTTTCACTCACATATTATATTGATATTTAAAA  350

seq1  TTTAATGAACATAATGTTATGATTTGATATATGCTATGCACACAAAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGAACATAATGTTATGATTTGATATATGCTATGCACACAAAGTAT  400

seq1  AGCAATAAAATTAGCATAGAAAAGTTCCTATCTATGAATATTTTTGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAAAATTAGCATAGAAAAGTTCCTATCTATGAATATTTTTGTTTT  450

seq1  TGATATAGAAAATGATTTAAAATTTATAATATCACAAAAATACACCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAGAAAATGATTTAAAATTTATAATATCACAAAAATACACCATTG  500

seq1  CTGTTGATTTAAGCAGTTATATTTTAGACTTTTAAAAGTATAGATGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGATTTAAGCAGTTATATTTTAGACTTTTAAAAGTATAGATGTATT  550

seq1  TCAAGGTCTTAGTTTCTTTTCTACTAGAATTTAAAAGAAAAAGTACTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTCTTAGTTTCTTTTCTACTAGAATTTAAAAGAAAAAGTACTTTA  600

seq1  ATGATATTTAATATGTTCCAGAACAAAGAAAAAGGAAAGACTCAAATGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTTAATATGTTCCAGAACAAAGAAAAAGGAAAGACTCAAATGCC  650

seq1  AAAACTGAGAAATCATAATTAATTCTTTATTATTGCCAATAAAAGATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAGAAATCATAATTAATTCTTTATTATTGCCAATAAAAGATATC  700

seq1  AAATTAAATGCTAACAAATAGAGGACTTAGCCCCATTAAAAGAGAAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAATGCTAACAAATAGAGGACTTAGCCCCATTAAAAGAGAAAAGT  750

seq1  AAACCAAGGTGATAAGTTTCATGATGGAAAAATTTAAAAGATTAAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAGGTGATAAGTTTCATGATGGAAAAATTTAAAAGATTAAATATT  800

seq1  GGGAAATGGAGCACAGTTTTATCAAATAAAATCTGACAATAATTTCCTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGGAGCACAGTTTTATCAAATAAAATCTGACAATAATTTCCTTA  850

seq1  AATAACATTAATTTTATAAAA-TTTCAATAAATATGATTAATCAAAACAG  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATAACATTAATTTTATAAAATTTTCAATAAATATGATTAATCAAAACAG  900

seq1  ATTGAAACAGTGAAAAAATAGTAAAATTAGAATTTTAG-AAATCTCTATT  948
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTGAAACAGTGAAAAAATAGTAAAATTAGAATTTTAGAAAATCTCTATT  950

seq1  ATCCTGTTTACTGG-TAAGA-CACTGAAGAA-GTA-TACCAATGTCAA-G  993
      |||||||||||||| ||||| |||||||||| ||| |||||||||||| |
seq2  ATCCTGTTTACTGGTTAAGACCACTGAAGAAGGTATTACCAATGTCAAGG  1000

seq1  AATGCAGTCAATA-GGTCT-GTAATCACTTCTGACA-TTTTGTTATTTGG  1040
      ||||||||||||| ||||| |||||||||||||||| |||||||||||||
seq2  AATGCAGTCAATAGGGTCTGGTAATCACTTCTGACATTTTTGTTATTTGG  1050

seq1  G--TGCA-CTCTAGTATAACTA-GAAAAAGCTAAGAAAATAAG---ATAT  1083
      |   ||| |||||||||||||| ||||||||| |||| |||||   || |
seq2  GGTGGCACCTCTAGTATAACTAGGAAAAAGCT-AGAAGATAAGGATATTT  1099

seq1  AAATATTGGAAACATTAAAACGTTTCATTATTCAT-GGACA-TGATTACA  1131
      ||||||||||||||| |||  |||||||||| ||| ||||| ||||||||
seq2  AAATATTGGAAACATAAAACGGTTTCATTATCCATGGGACATTGATTACA  1149

seq1  T--ACTGTAAGATAA---CAGTTGAACAA  1155
      |   |||||||||||    |  |||||||
seq2  TTACCTGTAAGATAATACGATGTGAACAA  1178