BAC Information

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BAC

Clone NameB6Ng01-186D10
ChromosomeX (Build37)
Map Location 116,172,876 - 116,173,771
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
Downstream geneLOC385417, Pabpc5, LOC236983, LOC674318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186D10.bB6Ng01-186D10.g
ACCGA011119GA011120
length1,1261,196
definitionB6Ng01-186D10.b B6Ng01-186D10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgagttctattttttatgcaaagtctatcctcattcagtgac
ctgtaataatcagtaaatgatcttgatttttttctgaaagttatggttac
tgtagtaatatgtcttaaaaacagacagcatttgaatttatgttaacaat
tgatttccaatgtttcttgatagcataagatatgtatctaaattatttta
taaacagtggatattattttaaaactatagccatctttgaaaatatgtca
ttgctttatcaaaaaatggatataatatctgaagttttgttgatatacta
atattcttcacaatatcttcaccaggaatatttgccttatcatgaatcca
ctttttgcaactctactgtaatagtgtcatgaaataagaacagtttactc
atcttatttgtatatatttctaattctgttctaacattatttcttcatta
cgtgcctgcaatgtgtcttcacttaaagatccagttctttcaaaattatc
caggaagtttgcagacatttttgtctaaatggctgatgttcatattttgt
cctcatcccatgagttttcattaatgtatgtagaattgtggatctcttac
agaaggttttctcaaactgctttgctcggattcaagtaaaaaatcattag
ttacaaagttgtagccttgaaatgtgtttctgaagaaatgatatatgact
ccttgctctgtgggtttcgggatgtgggttgtcttatggaaaactaatgt
tcaatagagctaatttttaattttcatttatcttatatgatacaatgtta
atgttatgtatttaaaaattgagggactaatgagaaggaaaaagtacata
ttcaattatgctacaatattccctctagtttctcttttcctactgtactt
tgtgtccacagtaatacccctttttctcatgatatctttttattactatt
ccctataattgtatcctttcatagtccatgggcttctttattttcaattt
ctccctatgtttagtctcaagtattacatatatgcaattgtcttaataat
ttcattttttttccattttattaggtatttactcatttaacattgcaatg
ctataccaaaagtccccatattcacc

gaattcaccatgtacacctctactaggaagctgtgaaaataatagaacac
cttgttgaatttttagtaaaaatgtcgatttcaaaaaaaccttcagttaa
attgggacaaagttctaaattcacaggattcttggaactgttacttacaa
tgtaggccaagaaactatagtgttggaagtgtcatgatatttagataaaa
gttcatttgtttatcaggcttttaaagtggattgcttttatgttaaatat
tggataacaccatgaatcatgtatttaccagataaaaatgtgctttagac
aaatcatatgcctacacattatgaatatattaaaatttatatattaccaa
gaatacacataagaaaaagtaagtctttagggaaaagcaaatcaaatcaa
cactgagattccacctcacacaaatcagaatgactaagatcaaaaattca
ggtgacatcagatgctggcaaggttgtagagagaggaacactcctccatt
gcttgtgggattgcaagcaggttcaaccactctggaaatcagtttggcag
ttcctcagaaattggacgtagtacaaccagaagatccagcagtaccactc
ctggtcatatacccagaagatgctctaacatgtattaaggacacatgctc
cactatgttcatagaagacttatttataatagccagaagctgaaaagaac
ccagatgctcctgaacagaggaacagatacaaaacttgtgctatatttac
acaatggagtactactcagatattgaaaacaatgaattcatgaaattctt
aggcaaattgatggaagtagaaaatatcatccagagtgaggtaacccaat
aacaaaagaacaggcatggtatccactcactgataagtggatattagccc
agaaaactcagaatacccaagatacaatttcataaaccacatgaaacaca
agaagaaggagaccaaagtgtggatacttcgctccttcctagaaggaaga
acaaatagccgttgaaagagttacagagacaaagttgtggagcagagact
gagatgaccacccagtgactgtcccacaatgagcatcatccatatgtatc
accaaatcagaacttgtgaatgacaacaagagtactgatagaagctgttt
agctgtcctcctggaaggaatcacccagtgctcctggcacaacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_116172876_116173771
seq2: B6Ng01-186D10.b_281_1170

seq1  TTGAAAATATGTCATTGCTTTATCAAAAAATGGATATAATATCTGAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATATGTCATTGCTTTATCAAAAAATGGATATAATATCTGAAGTT  50

seq1  TTGTTGATATACTAATATTCTTCACAATATCTTCACCAGGAATATTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGATATACTAATATTCTTCACAATATCTTCACCAGGAATATTTGCC  100

seq1  TTATCATGAATCCACTTTTTGCAACTCTACTGTAATAGTGTCATGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATGAATCCACTTTTTGCAACTCTACTGTAATAGTGTCATGAAATA  150

seq1  AGAACAGTTTACTCATCTTATTTGTATATATTTCTAATTCTGTTCTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGTTTACTCATCTTATTTGTATATATTTCTAATTCTGTTCTAACA  200

seq1  TTATTTCTTCATTACGTGCCTGCAATGTGTCTTCACTTAAAGATCCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTTCATTACGTGCCTGCAATGTGTCTTCACTTAAAGATCCAGTT  250

seq1  CTTTCAAAATTATCCAGGAAGTTTGCAGACATTTTTGTCTAAATGGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAAATTATCCAGGAAGTTTGCAGACATTTTTGTCTAAATGGCTGA  300

seq1  TGTTCATATTTTGTCCTCATCCCATGAGTTTTCATTAATGTATGTAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATATTTTGTCCTCATCCCATGAGTTTTCATTAATGTATGTAGAAT  350

seq1  TGTGGATCTCTTACAGAAGGTTTTCTCAAACTGCTTTGCTCGGATTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATCTCTTACAGAAGGTTTTCTCAAACTGCTTTGCTCGGATTCAAG  400

seq1  TAAAAAATCATTAGTTACAAAGTTGTAGCCTTGAAATGTGTTTCTGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATCATTAGTTACAAAGTTGTAGCCTTGAAATGTGTTTCTGAAGA  450

seq1  AATGATATATGACTCCTTGCTCTGTGGGTTTCGGGATGTGGGTTGTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATATGACTCCTTGCTCTGTGGGTTTCGGGATGTGGGTTGTCTTA  500

seq1  TGGAAAACTAATGTTCAATAGAGCTAATTTTTAATTTTCATTTATCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACTAATGTTCAATAGAGCTAATTTTTAATTTTCATTTATCTTAT  550

seq1  ATGATACAATGTTAATGTTATGTATTTAAAAATTGAGGGACTAATGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACAATGTTAATGTTATGTATTTAAAAATTGAGGGACTAATGAGAA  600

seq1  GGAAAAAGTACATATTCAATTATGCTACAATATTCCCTCTAGTTTCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGTACATATTCAATTATGCTACAATATTCCCTCTAGTTTCTCTT  650

seq1  TTCCTACTGTACTTTGTGTCCACAGTAATACCCC-TTTTCTCATTGATAT  699
      |||||||||||||||||||||||||||||||||| |||||||| ||||||
seq2  TTCCTACTGTACTTTGTGTCCACAGTAATACCCCTTTTTCTCA-TGATAT  699

seq1  CTTTTTATTACTATT-CCTATAATTGTATCCTTTCATAGTCCATGGGCTT  748
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTTTTTATTACTATTCCCTATAATTGTATCCTTTCATAGTCCATGGGCTT  749

seq1  CTTTATTTTCCAATTTCTCCCTATGTTTAGTCTCAAGTAATTACATATAT  798
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  CTTTATTTT-CAATTTCTCCCTATGTTTAGTCTCAAGT-ATTACATATAT  797

seq1  GCAATTGTCTTAATAATTTTCTTTTTTTTTCCATTTTTTATTAGGTATTT  848
      |||||||||||||||| |||| |||||||||||  |||||||||||||||
seq2  GCAATTGTCTTAATAA-TTTCATTTTTTTTCCA--TTTTATTAGGTATTT  844

seq1  AACTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCCACC  896
       |||||||||   || |||||||||||||||||| |||||||| ||||
seq2  -ACTCATTTAACATTGCAATGCTATACCAAAAGT-CCCCATATTCACC  890


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