BAC Information

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BAC

Clone NameB6Ng01-188P23
ChromosomeX (Build37)
Map Location 110,837,468 - 110,838,624
singlet/doubletsinglet
Overlap geneDach2
Upstream geneLOC623412, EG623428, LOC100039112, Chm, EG664918
Downstream geneLOC237016, EG664945, EG634881, LOC100039201, Klhl4, Gm1866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188P23.bB6Ng01-188P23.g
ACCGA013137GA013138
length1,1891,160
definitionB6Ng01-188P23.b B6Ng01-188P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttctataccccacttttttattggattgtttggtt
ttttttggaagttagcttcttgagttctttatatattttatatattagcc
ctctgttgcatgtgggtttaatgaaggggttttttttccccaatctgaag
gttaccagtttttcctcttgactatgtcctttgccttacagaagctttcc
agtttcatgaggtcccatttatcagttcttaatcttagagcctaagctat
tggagttctgtttaggaaatttcctcctatgccaatgagttttattctag
gtctctgggttatctagtctcagattcttgcttatccatgctgtgtcagg
aataggttccatctcatggagtaggccttaagtcaaatcagttattggtt
cattactcccaccagctttgtgccaccattgctctagcatacttggatgc
aagatgccatcgttgatcaaatgtggctggcttggagattaagtttctct
tttggttgcttgtagaatacaaatgatattagaatgtggagggcaaggat
gtatgtgggcacctttccatgttctatgagttatataggtattgtcttca
gcaatagggctctgttgtcattttgtggagaacaacctaaagtcttgtca
gcaggatgacttgtttgggaattcctgtgggactcctctggccaagagct
caattagatgcaacctaagcccagcactggaaactttgattataagagat
ggacagatgcaactgccattttttggcagtttcatttagatcactttcat
gtatgcataaattaaaattttctgttgtactaagtttgcatgctattctg
aaaatgacgctttatttttgttctctctacctgtgttccctccctcaact
cattctcccattccttcttgatacttctagtcaatccatctacaattatc
tattctatttatctttcctaacaagatctctctgtaccctctctagtcct
tatcctatacttactctctgtttttctacagaattgtaccttgggttatt
taatataaacagctaatagcccgttaataatacatactacattatatgaa
ttctggacacctcacttcagaatttttttttcgaatcattcacttatatt
ttaaggtaccgaatgttcatcctctataatctaggatcg

gaattcctggtaatataaacaacattgacatttgctactataattgaaag
caggttaggactttaacatgacacttattctctattaacaaagatataaa
gttggagttgtaagcattccttttattgacatattttctttaatagtttg
aaacttaggcaatttgtattctgcctgactgactcacctattaacatctg
ttaaaggaagtgacatgccagaaactatgtgaatatcaaaagattctatt
gatattactgatggtccaaaatgttactattgtgcaataaaacaattttt
aaatgctataataatgaacaaggatgctttagaaaatcttcctcatgcta
ttatgtaaatattttaatgtgcactgtctcttttaggtctggatctccca
tttatgatgatgcctcatcccctacttccagtcagcttacctcctgcatc
agttgccatggcaatgaatcagatgaatcatctcaatactattgccaaca
tggctgctgcagcccagattcacagtccactctccagagctggtgcctct
gttataaaggtaggaatcactattttgaagaagatgagggtattgattgt
gtacaaattttgataaatatcagcagtaccactaaatcttcagtaataac
acatagatcattgactctattattatgcagtgtttttgagtctggtttct
gactaggcctgctgggttttgttattgttcaggtttgttgtctttttact
gccacagatctctcttttactcaaatcttgtatcttaaaatcaagtgcac
tgtatataagatatgcagccaaactaatcacagggaggactgtaatgtaa
aacacattcccatttgtggaatgagatgatgcaacattgtacatcttttt
gaaatttaagtgaaaattgtaaggtaatctttactgtccaatatttatac
tcaaacaggctttggtcccagtctagtttgccaccaattgataatggcct
gaaaaatgaatatgtcccttcttcttgaatacatttcttcacttgtaatg
gaaaatcacagtaattcctcttattctacctggactgacctagaagaata
atatatggaacaaatatcttgttaattccagtaggcttagcttagtatgg
tcagtcattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110837468_110838624
seq2: B6Ng01-188P23.g_65_1224

seq1  GAATTCCTGGTAATATAAACAACATTGACATTTGCTACTATAATTGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTAATATAAACAACATTGACATTTGCTACTATAATTGAAAG  50

seq1  CAGGTTAGGACTTTAACATGACACTTATTCTCTATTAACAAAGATATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAGGACTTTAACATGACACTTATTCTCTATTAACAAAGATATAAA  100

seq1  GTTGGAGTTGTAAGCATTCCTTTTATTGACATATTTTCTTTAATAGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGTTGTAAGCATTCCTTTTATTGACATATTTTCTTTAATAGTTTG  150

seq1  AAACTTAGGCAATTTGTATTCTGCCTGACTGACTCACCTATTAACATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGGCAATTTGTATTCTGCCTGACTGACTCACCTATTAACATCTG  200

seq1  TTAAAGGAAGTGACATGCCAGAAACTATGTGAATATCAAAAGATTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGAAGTGACATGCCAGAAACTATGTGAATATCAAAAGATTCTATT  250

seq1  GATATTACTGATGGTCCAAAATGTTACTATTGTGCAATAAAACAATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTACTGATGGTCCAAAATGTTACTATTGTGCAATAAAACAATTTTT  300

seq1  AAATGCTATAATAATGAACAAGGATGCTTTAGAAAATCTTCCTCATGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTATAATAATGAACAAGGATGCTTTAGAAAATCTTCCTCATGCTA  350

seq1  TTATGTAAATATTTTAATGTGCACTGTCTCTTTTAGGTCTGGATCTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAATATTTTAATGTGCACTGTCTCTTTTAGGTCTGGATCTCCCA  400

seq1  TTTATGATGATGCCTCATCCCCTACTTCCAGTCAGCTTACCTCCTGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATGATGCCTCATCCCCTACTTCCAGTCAGCTTACCTCCTGCATC  450

seq1  AGTTGCCATGGCAATGAATCAGATGAATCATCTCAATACTATTGCCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCCATGGCAATGAATCAGATGAATCATCTCAATACTATTGCCAACA  500

seq1  TGGCTGCTGCAGCCCAGATTCACAGTCCACTCTCCAGAGCTGGTGCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGCAGCCCAGATTCACAGTCCACTCTCCAGAGCTGGTGCCTCT  550

seq1  GTTATAAAGGTAGGAATCACTATTTTGAAGAAGATGAGGGTATTGATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAAGGTAGGAATCACTATTTTGAAGAAGATGAGGGTATTGATTGT  600

seq1  GTACAAATTTTGATAAATATCAGCAGTACCACTAAATCTTCAGTAATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAATTTTGATAAATATCAGCAGTACCACTAAATCTTCAGTAATAAC  650

seq1  ACATAGATCATTGACTCTATTATTATGCAGTGTTTTTGAGTCTGGTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGATCATTGACTCTATTATTATGCAGTGTTTTTGAGTCTGGTTTCT  700

seq1  GACTAGGCCTGCTGGGTTTTGTTATTGTTCAGGTTTGTTGTCTTTTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGCCTGCTGGGTTTTGTTATTGTTCAGGTTTGTTGTCTTTTTACT  750

seq1  GCCACAGATCTCTCTTTTACTCAAATCTTGTATCTTAAAATCAAGTGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGATCTCTCTTTTACTCAAATCTTGTATCTTAAAATCAAGTGCAC  800

seq1  TGTATATAAGATATGCAGCCAAACTAATCACAGGGAGGACTGTAATGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATAAGATATGCAGCCAAACTAATCACAGGGAGGACTGTAATGTAA  850

seq1  AACACATTCCCATTTGTGGAATGAGATGATGCAACATTGTACATCTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTCCCATTTGTGGAATGAGATGATGCAACATTGTACATCTTTTT  900

seq1  GAAATTTAAGTGAAAATTGTAAGGTAATCTTTACTGTCCAATATTTATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAAGTGAAAATTGTAAGGTAATCTTTACTGTCCAATATTTATAC  950

seq1  TCAAACAGGCTTTGGTCCCAGTTCTAGTTTGCCACCAATTGATTAAATGG  1000
      ||||||||||||||||||||| |||||||||||||||||||||  |||||
seq2  TCAAACAGGCTTTGGTCCCAG-TCTAGTTTGCCACCAATTGAT--AATGG  997

seq1  CCTGAAAAATG-ATATGTCCCT--CTCTTGAATACATTTCTTCACTTGTA  1047
      ||||||||||| ||||||||||   |||||||||||||||||||||||| 
seq2  CCTGAAAAATGAATATGTCCCTTCTTCTTGAATACATTTCTTCACTTGT-  1046

seq1  AAATGAAAATCACAGTAATT-CTC-TATTCTA-CTTGACTGA-CTAGA--  1091
      ||  |||||||||||||||| ||| ||||||| || |||||| |||||  
seq2  AATGGAAAATCACAGTAATTCCTCTTATTCTACCTGGACTGACCTAGAAG  1096

seq1  GATAATATATGAACAAAATATC-TGTTAAATCCAGTAGAGCATAGCTAGG  1140
       |||||||||| |  ||||||| |||||| |||||||| || |||||  |
seq2  AATAATATATGGAACAAATATCTTGTTAATTCCAGTAG-GCTTAGCTTAG  1145

seq1  AAATGGGTCAGTCATTG  1157
       |   ||||||||||||
seq2  TA--TGGTCAGTCATTG  1160


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