BAC Information

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BAC

Clone NameB6Ng01-191D09
ChromosomeX (Build37)
Map Location 114,850,526 - 114,987,509
singlet/doubletdoublet
Overlap geneLOC665066
Upstream geneLOC100039300, EG665045, LOC100039319, LOC624284
Downstream geneEG624388, ENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D09.bB6Ng01-191D09.g
ACCGA014766GA014767
length8611,036
definitionB6Ng01-191D09.b B6Ng01-191D09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,850,526 - 114,851,251)(114,986,474 - 114,987,509)
sequence
gaattctctgtaaagctttgttttccatttttaataaggttatttggttc
tctggcatccctgatttcaagatggactacaaagcaatagtgataaaaaa
aatgcatagaactggtacaatgacaggcatgtagatcaatggaacagaat
tgaagacccagaaatgaacccacacacctatggtcacttgatctttaaca
aaggagctaaaaccatccagtggaaagaagacagaatcttcaacaaatgg
tgctggttcaattggtggtcaacaagtagaagaatgcaaattgatccatt
cttatatcgctgtacaaagctcaagtccaagtgaatcaaggacctccaca
taaaaccagacacactgaatctaataaaagagaaagtggagaaaagtcta
gaacacatgggcacagggggaaatttcctgaacagaacaccaatggctta
agccctaagattaaaaaaaatcaacaaatgggacctcataaaattgcaaa
gcttctgtaaagactaggacactgtcaataggatgaaatggcaaccgaca
gattgaaaagtgatctttaccaattctacatctgatagaagactaatatt
caatagatacaaagagctcaaagagttaggcattttttaaaggacgtgat
cccaactagattgaacattgttcctgggaaagccacatggccaagagtaa
aaaggcaatggaaactgtatttgatatgtttttgtttggttggttcattg
gttggctttttgtttgtttgtttgggggatatttgcttgtcttttagttt
gtttttaaataggacatacagtgagatgggtagtaaaatggggtaagatc
tgggaggagtt

gaattccatattacttaatatacaagaactttggtgaggtagtgtttgag
gggatataggaacataatgataacactaggttgaccatgtattagaattt
taatgaacataagtttatgatgtatgacagagatgaatagctgtttcttt
tggaagaaacttttggtgatatgaaaaaattattttaggtaattgactta
agaagggtttttgactataccttttgaaattattggaataatgacatcca
tgtaattggaatgtgtttttcttctatttttctaatgtatttcttgtacc
taataagaaaatagttactctgacagccaccatcatgataaaggactgaa
cctcagaacatgtatgccaggtacaaagaaatgtttttctttataagact
tgcctttgtaatagattcttttacagcaatggaaaccctaagactgaagt
cactactattgcctgggatattgctgtgataatcctgattgtggttttgt
ttagagtaacaaggattagggattttggaaaacagtggaattatttaagt
ggatcttaaatggccattatattaggaatctggtgatttcaactgtgcag
acctggcttgagaggtttcagtgaagactggcttccaggcaacaagaagg
aactgtctctcagtctctcagtccattcccacagtttcagactttctcca
gtaagtccacacttaataatagtgccactccctgggtcaattatatataa
tgcaccatagtatacattagcaaaaagaaaattaaaagctaaaaggattt
ttgaacactgaaataaaaattaagtaatgatcttcaatcaattcataact
actgtgtctttatatatattgttttaagaattagtttaattttgtaaaaa
actatgtatatgtaggtttgtgtgtgtatagataagggaagtaatatgct
tgtagtgcagtgatgagccacattagaatattgcaatcacacgaactgga
gcaccaatggagtgtgagttggcatgttgtgtctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_114850526_114851251
seq2: B6Ng01-191D09.b_178_903

seq1  TCAATGGAACAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGAACAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTC  50

seq1  ACTTGATCTTTAACAAAGGAGCTAAAACCATCCAGTGGAAAGAAGACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATCTTTAACAAAGGAGCTAAAACCATCCAGTGGAAAGAAGACAGA  100

seq1  ATCTTCAACAAATGGTGCTGGTTCAATTGGTGGTCAACAAGTAGAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAACAAATGGTGCTGGTTCAATTGGTGGTCAACAAGTAGAAGAAT  150

seq1  GCAAATTGATCCATTCTTATATCGCTGTACAAAGCTCAAGTCCAAGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTGATCCATTCTTATATCGCTGTACAAAGCTCAAGTCCAAGTGAA  200

seq1  TCAAGGACCTCCACATAAAACCAGACACACTGAATCTAATAAAAGAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGACCTCCACATAAAACCAGACACACTGAATCTAATAAAAGAGAAA  250

seq1  GTGGAGAAAAGTCTAGAACACATGGGCACAGGGGGAAATTTCCTGAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAAAAGTCTAGAACACATGGGCACAGGGGGAAATTTCCTGAACAG  300

seq1  AACACCAATGGCTTAAGCCCTAAGATTAAAAAAAATCAACAAATGGGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAATGGCTTAAGCCCTAAGATTAAAAAAAATCAACAAATGGGACC  350

seq1  TCATAAAATTGCAAAGCTTCTGTAAAGACTAGGACACTGTCAATAGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAATTGCAAAGCTTCTGTAAAGACTAGGACACTGTCAATAGGATG  400

seq1  AAATGGCAACCGACAGATTGAAAAGTGATCTTTACCAATTCTACATCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCAACCGACAGATTGAAAAGTGATCTTTACCAATTCTACATCTGA  450

seq1  TAGAAGACTAATATTCAATAGATACAAAGAGCTCAAAGAGTTAGGCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACTAATATTCAATAGATACAAAGAGCTCAAAGAGTTAGGCATTT  500

seq1  TTTAAAGGACGTGATCCCAACTAGATTGAACATTGTTCCTGGGAAAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGACGTGATCCCAACTAGATTGAACATTGTTCCTGGGAAAGCCA  550

seq1  CATGGCCAAGAGTAAAAAGGCAATGGAAACTGTATTTGATATGTTTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCAAGAGTAAAAAGGCAATGGAAACTGTATTTGATATGTTTTTGT  600

seq1  TTGGTTGGTTCATTGGTTGGCTTTTTGTTTGTTTGTTTGGGGGATATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGTTCATTGGTTGGCTTTTTGTTTGTTTGTTTGGGGGATATTTG  650

seq1  CTTGTCTTTTAGTTTGTTTTTAAATAGGACATACAGTGAGATGGGTAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTTTTAGTTTGTTTTTAAATAGGACATACAGTGAGATGGGTAGTA  700

seq1  AAATGGGGTAAGATCTGGGAGGAGTT  726
      ||||||||||||||||||||||||||
seq2  AAATGGGGTAAGATCTGGGAGGAGTT  726


seq1: chrX_114986474_114987509
seq2: B6Ng01-191D09.g_61_1096 (reverse)

seq1  CCAGAACACAACATG-CAACTCACACTCACTTGTTGCTCCAGTTC-TGTG  48
      |||| |||||||||| ||||||||||||  ||| ||||||||||| ||||
seq2  CCAG-ACACAACATGCCAACTCACACTCCATTGGTGCTCCAGTTCGTGTG  49

seq1  AATGCAATATTCTAATTGTGGCTCATCACTGCACTTACAAGCATA-TACC  97
      | ||||||||||||| |||||||||||||||||| |||||||||| ||| 
seq2  ATTGCAATATTCTAA-TGTGGCTCATCACTGCAC-TACAAGCATATTACT  97

seq1  TCCCTTATCTATACACACACAAACCTACATATACATAGTTTTTTACAAAA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTATCTATACACACACAAACCTACATATACATAGTTTTTTACAAAA  147

seq1  TTAAACTAATTCTTAAAACAATATATATAAAGACACAGTAGTTATGAATT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTAATTCTTAAAACAATATATATAAAGACACAGTAGTTATGAATT  197

seq1  GATTGAAGATCATTACTTAATTTTTATTTCAGTGTTCAAAAATCCTTTTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAGATCATTACTTAATTTTTATTTCAGTGTTCAAAAATCCTTTTA  247

seq1  GCTTTTAATTTTCTTTTTGCTAATGTATACTATGGTGCATTATATATAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAATTTTCTTTTTGCTAATGTATACTATGGTGCATTATATATAAT  297

seq1  TGACCCAGGGAGTGGCACTATTATTAAGTGTGGACTTACTGGAGAAAGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAGGGAGTGGCACTATTATTAAGTGTGGACTTACTGGAGAAAGTC  347

seq1  TGAAACTGTGGGAATGGACTGAGAGACTGAGAGACAGTTCCTTCTTGTTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGTGGGAATGGACTGAGAGACTGAGAGACAGTTCCTTCTTGTTG  397

seq1  CCTGGAAGCCAGTCTTCACTGAAACCTCTCAAGCCAGGTCTGCACAGTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGCCAGTCTTCACTGAAACCTCTCAAGCCAGGTCTGCACAGTTG  447

seq1  AAATCACCAGATTCCTAATATAATGGCCATTTAAGATCCACTTAAATAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACCAGATTCCTAATATAATGGCCATTTAAGATCCACTTAAATAAT  497

seq1  TCCACTGTTTTCCAAAATCCCTAATCCTTGTTACTCTAAACAAAACCACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGTTTTCCAAAATCCCTAATCCTTGTTACTCTAAACAAAACCACA  547

seq1  ATCAGGATTATCACAGCAATATCCCAGGCAATAGTAGTGACTTCAGTCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATTATCACAGCAATATCCCAGGCAATAGTAGTGACTTCAGTCTT  597

seq1  AGGGTTTCCATTGCTGTAAAAGAATCTATTACAAAGGCAAGTCTTATAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCCATTGCTGTAAAAGAATCTATTACAAAGGCAAGTCTTATAAA  647

seq1  GAAAAACATTTCTTTGTACCTGGCATACATGTTCTGAGGTTCAGTCCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACATTTCTTTGTACCTGGCATACATGTTCTGAGGTTCAGTCCTTT  697

seq1  ATCATGATGGTGGCTGTCAGAGTAACTATTTTCTTATTAGGTACAAGAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATGGTGGCTGTCAGAGTAACTATTTTCTTATTAGGTACAAGAAA  747

seq1  TACATTAGAAAAATAGAAGAAAAACACATTCCAATTACATGGATGTCATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAGAAAAATAGAAGAAAAACACATTCCAATTACATGGATGTCATT  797

seq1  ATTCCAATAATTTCAAAAGGTATAGTCAAAAACCCTTCTTAAGTCAATTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAATAATTTCAAAAGGTATAGTCAAAAACCCTTCTTAAGTCAATTA  847

seq1  CCTAAAATAATTTTTTCATATCACCAAAAGTTTCTTCCAAAAGAAACAGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATAATTTTTTCATATCACCAAAAGTTTCTTCCAAAAGAAACAGC  897

seq1  TATTCATCTCTGTCATACATCATAAACTTATGTTCATTAAAATTCTAATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCTCTGTCATACATCATAAACTTATGTTCATTAAAATTCTAATA  947

seq1  CATGGTCAACCTAGTGTTATCATTATGTTCCTATATCCCCTCAAACACTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCAACCTAGTGTTATCATTATGTTCCTATATCCCCTCAAACACTA  997

seq1  CCTCACCAAAGTTCTTGTATATTAAGTAATATGGAATTC  1036
      |||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCAAAGTTCTTGTATATTAAGTAATATGGAATTC  1036


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