BAC Information

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BAC

Clone NameB6Ng01-191F17
ChromosomeX (Build37)
Map Location 115,878,122 - 116,031,986
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665066, EG624388, ENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
Downstream geneLOC385417
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191F17.bB6Ng01-191F17.g
ACCGA014869GA014870
length1,1561,172
definitionB6Ng01-191F17.b B6Ng01-191F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,878,122 - 115,879,273)(116,031,082 - 116,031,986)
sequence
gaattctagcattgtgaactatcagctagcagacacagctagcctaatca
cacttaaactgaccagccagttgtattttatccacttttctgattcaata
cggcctccaaacttttctttctctctcattctcactttaagatgttcagg
taggacacaaatggaaagtgaaacatttactgtcagtagttacagaatga
aatatgttttcaaaatttgtaattagtgtataaatgtctgtatctttcac
ataggtaaacactgaatatatttgcctatattttcaatcaggacacattt
aacgttttttcattataaaactatcggaggcttgtttgggcatgcttcag
cagtgatgttcccaagatttatgttgatctcatcagtactacttctgcta
ttctgtttcttgagtaagaaggaacagggtaagttggcacttcctccaac
cagattcctttcttgtttgtgtcattacacctatcatccaaagactattt
gcatagttttattccagtgctaggattgaattcagggcatcataaaacaa
tgtctctaagaatcagatgtatccactacccttgttttgatactatgtag
ctcatattggtcttgaattgagtattgattcatcaatggtctcaaaattg
aagaccaaattctatagaagaggtaagttccactgaacctgattctagct
gtatacaatccttcccctaaacccactgtgttattggctcattcttagta
gttctggctagtttcaaattcaatcttcctcttttccccgcctctttagc
actgggattataaccaggctaaaagccatatatttgatattttgtcagca
atccattttgacacctgagaatttagtaatcttctttgagtaatgtgaac
ttcatatgtatgtatgtatgtatgtatgtatgtacacacacacacacaca
cacacacactctaccagtgtgcaaatcttggactttgatactggaataca
ctttgactctaatttcttgctaactctctgtttctttgtgatacccaggt
gatttagaaggattctttttgtattagatctgaaggcttcaagaaatgga
cattgcacttcaaatgttggtgtctgcttttttcctagaaatatttttta
tttaca

gaattctctctccctcaatgttctttaagtaacttctttttcctgtctgt
tccaattagtgttggacagatcctatctgactcattctgtatagtctttg
tctgattaggaattttgtctgccccttaattagatatcattgtttgggat
taaatatatgtaataaagatgtatccatatttctgccacagggatgaaag
gtgtgtattaggggcctgtatgcattttagccagaaggattaaagctatg
tattccaaccagatcatatctttggatttgatcccttgccagagcagcca
ttctgccagattgaaattcctctacaaattgtgaataactaattacttta
acaggatggcctatgagtatgtctgttggggccaatattgactgataatt
gatataggagggctgagcccactgtgggaagttccatttcctgggcagtt
aatcttgagttgtacaagaaaactcatgaagtatgagccagggatatagc
caaaaatcaaaccaacaaacatctttcatctacagttgtttctgctccaa
gttcctcctgcccataggtccctcaatgatggactgtgttctggaaatgt
aagtcaaatatagcctttctttcctacagaaggcttttgatcagagtttt
atatcagagtaataaaactagaacaattatgcaaatatgtgtctgtatca
aaatatcacatgccacataaatatatgcaattagtatgtattgtttaaaa
tatataatacaatccttaagaaaaggcaggcagcattaatctatgtatgc
tactgttaaaactaaaaacaaatacaaaaaatgttaatgattgattatat
gaagaaaatcatagagaataagaacagagtgtttttttgttttttgtttt
caatttagaacagagtttgaaaattaaattagtgatgggtattgagtaat
ttgagtaaattatttacttaccttttcttttttaaattatttattttatg
catatgtggggacatatacatgtagagagttgcttccctgagacgagcag
tgccactagaagctgagtacagacagttctggtccacctattatgttctg
ctacctagctgtgtggaatctttgcagaacagtatactcatccacttcag
gctaaatttcaatcctcctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_115878122_115879273
seq2: B6Ng01-191F17.b_41_1196

seq1  GAATTCTAGCATTGTGAACTATCAGCTAGCAGACACAGCTAGCCTAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCATTGTGAACTATCAGCTAGCAGACACAGCTAGCCTAATCA  50

seq1  CACTTAAACTGACCAGCCAGTTGTATTTTATCCACTTTTCTGATTCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAACTGACCAGCCAGTTGTATTTTATCCACTTTTCTGATTCAATA  100

seq1  CGGCCTCCAAACTTTTCTTTCTCTCTCATTCTCACTTTAAGATGTTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCTCCAAACTTTTCTTTCTCTCTCATTCTCACTTTAAGATGTTCAGG  150

seq1  TAGGACACAAATGGAAAGTGAAACATTTACTGTCAGTAGTTACAGAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACACAAATGGAAAGTGAAACATTTACTGTCAGTAGTTACAGAATGA  200

seq1  AATATGTTTTCAAAATTTGTAATTAGTGTATAAATGTCTGTATCTTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTTTCAAAATTTGTAATTAGTGTATAAATGTCTGTATCTTTCAC  250

seq1  ATAGGTAAACACTGAATATATTTGCCTATATTTTCAATCAGGACACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTAAACACTGAATATATTTGCCTATATTTTCAATCAGGACACATTT  300

seq1  AACGTTTTTTCATTATAAAACTATCGGAGGCTTGTTTGGGCATGCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTTTTCATTATAAAACTATCGGAGGCTTGTTTGGGCATGCTTCAG  350

seq1  CAGTGATGTTCCCAAGATTTATGTTGATCTCATCAGTACTACTTCTGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGTTCCCAAGATTTATGTTGATCTCATCAGTACTACTTCTGCTA  400

seq1  TTCTGTTTCTTGAGTAAGAAGGAACAGGGTAAGTTGGCACTTCCTCCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCTTGAGTAAGAAGGAACAGGGTAAGTTGGCACTTCCTCCAAC  450

seq1  CAGATTCCTTTCTTGTTTGTGTCATTACACCTATCATCCAAAGACTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCCTTTCTTGTTTGTGTCATTACACCTATCATCCAAAGACTATTT  500

seq1  GCATAGTTTTATTCCAGTGCTAGGATTGAATTCAGGGCATCATAAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTTTTATTCCAGTGCTAGGATTGAATTCAGGGCATCATAAAACAA  550

seq1  TGTCTCTAAGAATCAGATGTATCCACTACCCTTGTTTTGATACTATGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTAAGAATCAGATGTATCCACTACCCTTGTTTTGATACTATGTAG  600

seq1  CTCATATTGGTCTTGAATTGAGTATTGATTCATCAATGGTCTCAAAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTGGTCTTGAATTGAGTATTGATTCATCAATGGTCTCAAAATTG  650

seq1  AAGACCAAATTCTATAGAAGAGGTAAGTTCCACTGAACCTGATTCTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAAATTCTATAGAAGAGGTAAGTTCCACTGAACCTGATTCTAGCT  700

seq1  GTATACAATCCTTCCCCTAAACCCACTGTGTTATTGGCTCATTCTTAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAATCCTTCCCCTAAACCCACTGTGTTATTGGCTCATTCTTAGTA  750

seq1  GTTCTGGCTAGTTTCAAATTCAATCTTCCTCTTTTCCCCGCCTCTTTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGCTAGTTTCAAATTCAATCTTCCTCTTTTCCCCGCCTCTTTAGC  800

seq1  ACTGGGATTATAACCAGGCTAAAAGCCATATATTTGATATTTTGTCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGATTATAACCAGGCTAAAAGCCATATATTTGATATTTTGTCAGCA  850

seq1  ATCCATTTTGACACCTGAGAATTTAGTAATCTTCTTTGAGTAATGTGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTTGACACCTGAGAATTTAGTAATCTTCTTTGAGTAATGTGAAC  900

seq1  TTCATATGTATGTATGTATGTATGTATGTATGTACACACACACACACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATGTATGTATGTATGTATGTATGTATGTACACACACACACACACA  950

seq1  CACACACACTCTACCAGTGTGCAAATC-TGGACTTTGATACTGG-ATACA  998
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  CACACACACTCTACCAGTGTGCAAATCTTGGACTTTGATACTGGAATACA  1000

seq1  ACTTGACTCTAA-TTCTTGCTAACTCTCTGTTTCCTTTGTGATA-CCAGG  1046
        |||||||||| |||||||||||||||||||| |||||||||| |||||
seq2  CTTTGACTCTAATTTCTTGCTAACTCTCTGTTT-CTTTGTGATACCCAGG  1049

seq1  TGATTAAGAAGGAT--CTTTTGTATAGAATCTGAAGGC-TCAAGGAATGG  1093
      ||||| ||||||||   ||||||||   |||||||||| ||||| |||||
seq2  TGATTTAGAAGGATTCTTTTTGTATTAGATCTGAAGGCTTCAAGAAATGG  1099

seq1  ACAATGGCACCTTCAAATGTTTGTGTCTTGCTTTTTTCTTAGATAT-TTT  1142
      || || ||| ||||||||||| ||||| |||||||||| |||| || |||
seq2  AC-ATTGCA-CTTCAAATGTTGGTGTC-TGCTTTTTTCCTAGAAATATTT  1146

seq1  TTTATTTACA  1152
      ||||||||||
seq2  TTTATTTACA  1156


seq1: chrX_116031082_116031986
seq2: B6Ng01-191F17.g_337_1236 (reverse)

seq1  GAGAGGAGGATGGAA--TTATGCTGAAGTGGAATGGAGTATACTGTTCTT  48
      ||||||||||| |||  |||  ||||||||||   ||||||||||||| |
seq2  GAGAGGAGGATTGAAATTTAGCCTGAAGTGGA--TGAGTATACTGTTC-T  47

seq1  GCAGAGGATCCACAC--TTAGTTCCCAGAACCATATTAGGTGACCCAGAA  96
      ||| ||  |||||||   ||| |  ||||| |||| ||||||  ||||||
seq2  GCAAAGATTCCACACAGCTAGGTAGCAGAA-CATAATAGGTGGACCAGAA  96

seq1  CTGTCTGTAACTCCAGC-TCTAGTGGCACTGCCTCTGTCTTCAGGG-AGC  144
      |||||||| ||| |||| ||||||||||||| ||| ||| |||||| |||
seq2  CTGTCTGT-ACT-CAGCTTCTAGTGGCACTG-CTC-GTC-TCAGGGAAGC  141

seq1  AACTCTTCCTACATGTATATGTCCCCACATATGCATAAAAT-AATAATTT  193
      ||||||  ||||||||||||||||||||||||||||||||| ||||||||
seq2  AACTCT--CTACATGTATATGTCCCCACATATGCATAAAATAAATAATTT  189

seq1  AAAAAAGAAAA-GTAAGTAAAT-ATTTACTCAATTTACTCAATACCCATC  241
      ||||||||||| |||||||||| |||||||||| ||||||||||||||||
seq2  AAAAAAGAAAAGGTAAGTAAATAATTTACTCAAATTACTCAATACCCATC  239

seq1  ACTAATTTAATTTTCAAAACTCTGTTCTAAATTGAAAAACAAAAAACAAA  291
      ||||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  ACTAATTTAATTTTC-AAACTCTGTTCTAAATTG-AAAACAAAAAACAAA  287

seq1  AAAACACTCTGTTCTTATTCTCTATGATTTTTCTTCATATAATCAATCAT  341
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAACACTCTGTTCTTATTCTCTATGA-TTTTCTTCATATAATCAATCAT  336

seq1  TAACATTTTTTGTATTTGTTTTTAGTTTTAACAGTAGCATACATAGATTA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTTTTGTATTTGTTTTTAGTTTTAACAGTAGCATACATAGATTA  386

seq1  ATGCTGCCTGCCTTTTCTTAAGGATTGTATTATATATTTTAAACAATACA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCCTGCCTTTTCTTAAGGATTGTATTATATATTTTAAACAATACA  436

seq1  TACTAATTGCATATATTTATGTGGCATGTGATATTTTGATACAGACACAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTGCATATATTTATGTGGCATGTGATATTTTGATACAGACACAT  486

seq1  ATTTGCATAATTGTTCTAGTTTTATTACTCTGATATAAAACTCTGATCAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATAATTGTTCTAGTTTTATTACTCTGATATAAAACTCTGATCAA  536

seq1  AAGCCTTCTGTAGGAAAGAAAGGCTATATTTGACTTACATTTCCAGAACA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTCTGTAGGAAAGAAAGGCTATATTTGACTTACATTTCCAGAACA  586

seq1  CAGTCCATCATTGAGGGACCTATGGGCAGGAGGAACTTGGAGCAGAAACA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCATCATTGAGGGACCTATGGGCAGGAGGAACTTGGAGCAGAAACA  636

seq1  ACTGTAGATGAAAGATGTTTGTTGGTTTGATTTTTGGCTATATCCCTGGC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGATGAAAGATGTTTGTTGGTTTGATTTTTGGCTATATCCCTGGC  686

seq1  TCATACTTCATGAGTTTTCTTGTACAACTCAAGATTAACTGCCCAGGAAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTCATGAGTTTTCTTGTACAACTCAAGATTAACTGCCCAGGAAA  736

seq1  TGGAACTTCCCACAGTGGGCTCAGCCCTCCTATATCAATTATCAGTCAAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTCCCACAGTGGGCTCAGCCCTCCTATATCAATTATCAGTCAAT  786

seq1  ATTGGCCCCAACAGACATACTCATAGGCCATCCTGTTAAAGTAATTAGTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCCCAACAGACATACTCATAGGCCATCCTGTTAAAGTAATTAGTT  836

seq1  ATTCACAATTTGTAGAGGAATTTCAATCTGGCAGAATGGCTGCTCTGGCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAATTTGTAGAGGAATTTCAATCTGGCAGAATGGCTGCTCTGGCA  886

seq1  AGGGATCAAATCCA  905
      ||||||||||||||
seq2  AGGGATCAAATCCA  900


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