BAC Information

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BAC

Clone NameB6Ng01-192I12
ChromosomeX (Build37)
Map Location 90,323,439 - 90,323,946
singlet/doubletsinglet
Overlap genenone
Upstream geneEG236892, EG236893, Mageb18, EG436259, EG668061, EG546347, LOC629568
Downstream geneLOC100042663, Rp23-438h3.2, Arx, Pola1, EG629581, Pcyt1b, Pdk3, EG668103, LOC100042041, AU015836, EG245516, LOC100042062, EG629591, Zfx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192I12.bB6Ng01-192I12.g
ACCGA015748GA015749
length1,228847
definitionB6Ng01-192I12.b B6Ng01-192I12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaaaactttgaataccaatactctttaaagtagttcacaaaa
cagaaacataaggaacacagctcaattctttctatgatgccataattaca
caagtaccaaaactatacaaagacccaacaaggaaatagaacttcagacc
aattttccttatgattatccatgcaaagatactcaataaaattcttccca
aatgaatccaagaatacatcaaaatttaccatggccaagtagccttcatc
ctacaaatgcagtgatggttcatatatggaaatccatccatgtaatctac
tacataaacaaactcaaagggaaaaaaaaccatatgatcatttaattaga
tggtgaaagaacacttgatcaaattcaacatccctttgtgttaaaagtct
ttgaaagatcaggaattcaggcccatacctaaacatagtaaaagcaatat
acagcaaaccagtagctatcatcaaactaaatggagagaaactttaaaca
atcccacttaaatcagggacaagacaagtctaccctctccctctctgtat
ccattcaacatagtatttaagttctagctagagcaattagacaacaaaag
gaggtcaaagggacacatattggaaaggaaaaagtcaaactatcactatt
tacggagtatatgatagtgtaattaagttaccacaaaagatccaccagag
aactcctacagctaagaaaaaaaatcagcaaagtgactggatataaaatt
aactcaaacaaatcagtagccttcctatactcaaaggataaacaggctga
aaaagaaattagggaaacagtgcccttcacaatagtcacatataatataa
aatatcttgatgtaactctaaccaaataagtgaaagatttgtctgacaag
aacttcaagtctcagaagaaagaaatcgaaaaagacctcagaagatggaa
agatctcctatgctcaaggattggcaggattaatatagtaaaaaatgaca
atcttgctgaaagcatatacagattcaatagaatcccatcaaaatccaac
tcagtttcttcatcgagttagaaagagcatctcaattcatctgaatacaa
aatccatgatagcaaaactatttcttaacaataaaagaacttctgagatt
caggcaatcaagctcgaattgaacgtcagtactacggagccatatgtgat
taaaactcgtgtggtgtgctaatgttga
gaattctcagtgtgattaatacatatacaatacaacttctgtgcccaaga
ctttcaggactcaaagggaggaaacttagatgaaatgccccaacagtagg
gagagggaacttatagagcctacctccagcaggaaagcaggacatcaagt
gagggatggggttgacatcacacagtcacaaatttgacccgtaattgttc
ctgtctcaaagaattacaggtatggaaatggagaggagcctgaggaaaag
aaggtccagcgacaggcctaaagtggtaaccagctcaaggggaagtccca
agacctgacactattactgaggctaaggagcactcacaaaaagggatcta
tcatgactaccctccagaagacccaacaagcagctgaaagagtcagatgc
agatatttatacccaaccaatggacagaagcagctgatccctgttgttga
attggggaaagctgaaagaagctgtggagaatggtgaccaggtagaagga
ccagcattctcaattaatctggacccctgagatctctcaaagactggacc
accaaacaggcagcatacaccagctgatatgaggcccccgacacacatac
agtagaggacttcctggtctgtgttcattcagagatgatgcacctaacct
aagagactggaggcttcagtgagtttaaaggtcaggggttggggagttgg
gatatctatgtgaagacagagatgtgggaaggaggaatgcagtgtggaac
agtctgagggtggacgggagggggagtaaaatatagagtgtaaaaaatca
attatttaattcattaataacaagagaaaagtaattttttttaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_90323439_90323946
seq2: B6Ng01-192I12.g_564_910

seq1  ACCAGCAGTCTCAATTAATCTGGACCACTGAGATCTCTCAGACACTGGGC  50
      ||||||| |||||||||||||||||| ||||||||||||| | ||||| |
seq2  ACCAGCATTCTCAATTAATCTGGACCCCTGAGATCTCTCAAAGACTGGAC  50

seq1  CACCAAATAGACAGCATACACCAGCTGATATGAGGCCCCCAACATACATA  100
      ||||||| || ||||||||||||||||||||||||||||| ||| |||||
seq2  CACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCGACACACATA  100

seq1  CAGTAGAGGACTTCCAGGTTTGTGTCCATTCAGAGATGATGTACCTAACC  150
      ||||||||||||||| ||| ||||| ||||||||||||||| ||||||||
seq2  CAGTAGAGGACTTCCTGGTCTGTGTTCATTCAGAGATGATGCACCTAACC  150

seq1  CTCAAAAGACTGGAGGCCCCAGGGAATTTAGAGGTCAGGTGGGATAGAG-  199
         || |||||||||||  ||| || |||| |||||||  ||| | | | 
seq2  --TAAGAGACTGGAGGCTTCAGTGAGTTTAAAGGTCAG--GGGTTGGGGA  196

seq1  GTGGGGACATCCATGTGGAGACAGGGGGCTGGGAAGGAGGTATGGGATAT  249
      || |||| ||| ||||| |||||| |   ||||||||||| |||   | |
seq2  GTTGGGATATCTATGTGAAGACAGAGATGTGGGAAGGAGGAATGCAGTGT  246

seq1  GGAACAGTCAGAGGATGGACGGAGAGGGGAATAAAATCTAGAGTGTAAGA  299
      ||||||||| |||| |||||||   ||||| |||||| |||||||||| |
seq2  GGAACAGTCTGAGGGTGGACGGGAGGGGGAGTAAAATATAGAGTGTAA-A  295

seq1  AAATAAAATAAGTAATTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGT  349
      |||| || ||  |||   ||  ||  |     |   |     |  ||| |
seq2  AAATCAATTATTTAA---TTCATTAATAACAAG--AGAAAAGTAATTTTT  340

seq1  TTTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTACTGGAACTCAC  399
      |||   |                                           
seq2  TTTAAAA-------------------------------------------  347

seq1  TTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTC  449
                                                        
seq2  --------------------------------------------------  347

seq1  CCAAGTGCTGGGATTAAAGGCGTGCACCACTTGAGAGCTGAAGTAATTTT  499
                                                        
seq2  --------------------------------------------------  347

seq1  TTTTTAAAA  508
               
seq2  ---------  347