BAC Information

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BAC

Clone NameB6Ng01-193J17
ChromosomeX (Build37)
Map Location 153,174,016 - 153,302,589
singlet/doubletdoublet
Overlap genenone
Upstream gene4930503H13Rik, LOC640803
Downstream geneLOC434885, Phex, Gm1947, Sms, LOC100041181, EG625253, Mbtps2, LOC100040239, LOC667460, LOC667465, Smpx, Klhl34, Cnksr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193J17.bB6Ng01-193J17.g
ACCGA016530GA016531
length1,0231,140
definitionB6Ng01-193J17.b B6Ng01-193J17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,301,986 - 153,302,589)(153,174,016 - 153,174,854)
sequence
gaattctgcaatatccattaactacagtagctttttcatgtttttaatat
ctatttcattatacattgcaataatttcttctcttttatatcaataaacc
agtacacagtaaaggtacacacaagcaacccggtaggatgcaagtgttcc
caaaagcaaacaaaagagtcagagtccacacgcactaccactgttaagag
aagcacaaaaataccaagccacacaaccaaaatatatgtacagaggacct
agctcagactcatgctagtctcatgcttgccatttcactctatgtgagca
cctatgagcactgcttagttaattatgtgggccatgttcttgtggagttc
tcaatccctcttgtttctacttgccttcctctccttctttttcagggttc
acctggttccatttggtgttttgctctgggtctctgcattcataagtttg
ctctgggtcttatgcattgcctctctgatgactattaggttaggaaccaa
actttgcaccttcacatgatgaatgtttacattattttatgtcttagtta
ctatggtataatgaacatgagcacaagggttcagttgtctcttttgcata
atgattccatttcctttagatatgtaacccaggattcagattgctagatt
gtgtgatataataattttatttatctatttttaagaacctgtatactatt
atctatggctatattaattcatattgtataaactagtataatattatata
acaaaatgaaaagactcatttttctctacatctttagcaacagttaatta
ttttatgacatttgaataattgccaattgagcaggtgccatataatatct
caatgtatttttcatttgctttactttgataattagtgatgggtgagtgc
ttttgtgtgagtgttttctggttattcagccttttgcccagttttataat
ttaaggcttggtgttttcttactctttacttggaagggtttcttccctaa
tatatttttgattggtattcctt

gaattcctggcactggactttttatttgcttacctgtcatgtctagtaga
ggaactgttgccccattttagggtggcttcatttaatctctttacatatg
tgcatgtgcatatgtgtatattttaggaagcttttacagtagaaagtttc
cataatcttattacaaaagtctttactgttagtcattcctccaagtattc
ctttctccacattttcttcccacacctagcctacttaaatcttcttgttc
atgtttagcttttaaccctctatagtactgaattcaatcttcattacctt
gaaatatgcaccatgacattctattagtttcttgacctgtttgtgtattc
caaatgaaatatacatatctgaagattcaaagtttatatccacaaatgag
agaaagcatatgatgtttatctttgtgagtcttggttatctcactcagaa
tgtcttcaacttcatctagttacctgttaaagttttgtttctcttaacat
ctaaataatattcaattattcagatgtaccacatttataatgtctattca
tgagttgatggttatctaggctgtttcctatctctggttattgtgaatag
aacataagctatcatctagcaggtgtctctatagtaagatatagactcct
atggctatatttccaatagtgtatagctggattagatggtaaatctattt
ttaagttttcaaagacttctacaccaatttccatagtggctgaaccactt
tatactccctccagcaattcataatttcctactttctttacaccctcacc
aatatttgttcctgtttgattctgtttgttttttaaatgatgatggagag
attatcaaagactcatcagtgtcaatttcagcagtggagaagactgaagc
taatttgtaggtcaaggtgtgggctcatcttactgattctaaactcactc
tgtaacagacaagtagtgtagagctatgatgtattctcttttaaagattt
ttgttgttgttgtgtgttcaatatgagtacactgtagctgtcttcagaac
aacagaagaagtatcagattcattatgatgctgcgagcatcatgtgatgg
aaggaattgaactcaggactctggagaacgtcagtgcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_153301986_153302589
seq2: B6Ng01-193J17.b_50_653 (reverse)

seq1  TCATTATGCAAAAGAGACAACTGAACCCTTGTGCTCATGTTCATTATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATGCAAAAGAGACAACTGAACCCTTGTGCTCATGTTCATTATACC  50

seq1  ATAGTAACTAAGACATAAAATAATGTAAACATTCATCATGTGAAGGTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAACTAAGACATAAAATAATGTAAACATTCATCATGTGAAGGTGCA  100

seq1  AAGTTTGGTTCCTAACCTAATAGTCATCAGAGAGGCAATGCATAAGACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGTTCCTAACCTAATAGTCATCAGAGAGGCAATGCATAAGACCC  150

seq1  AGAGCAAACTTATGAATGCAGAGACCCAGAGCAAAACACCAAATGGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAACTTATGAATGCAGAGACCCAGAGCAAAACACCAAATGGAACC  200

seq1  AGGTGAACCCTGAAAAAGAAGGAGAGGAAGGCAAGTAGAAACAAGAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAACCCTGAAAAAGAAGGAGAGGAAGGCAAGTAGAAACAAGAGGGA  250

seq1  TTGAGAACTCCACAAGAACATGGCCCACATAATTAACTAAGCAGTGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACTCCACAAGAACATGGCCCACATAATTAACTAAGCAGTGCTCA  300

seq1  TAGGTGCTCACATAGAGTGAAATGGCAAGCATGAGACTAGCATGAGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCTCACATAGAGTGAAATGGCAAGCATGAGACTAGCATGAGTCTG  350

seq1  AGCTAGGTCCTCTGTACATATATTTTGGTTGTGTGGCTTGGTATTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGTCCTCTGTACATATATTTTGGTTGTGTGGCTTGGTATTTTTGT  400

seq1  GCTTCTCTTAACAGTGGTAGTGCGTGTGGACTCTGACTCTTTTGTTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTTAACAGTGGTAGTGCGTGTGGACTCTGACTCTTTTGTTTGCT  450

seq1  TTTGGGAACACTTGCATCCTACCGGGTTGCTTGTGTGTACCTTTACTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAACACTTGCATCCTACCGGGTTGCTTGTGTGTACCTTTACTGTG  500

seq1  TACTGGTTTATTGATATAAAAGAGAAGAAATTATTGCAATGTATAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTTATTGATATAAAAGAGAAGAAATTATTGCAATGTATAATGAA  550

seq1  ATAGATATTAAAAACATGAAAAAGCTACTGTAGTTAATGGATATTGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATTAAAAACATGAAAAAGCTACTGTAGTTAATGGATATTGCAGA  600

seq1  ATTC  604
      ||||
seq2  ATTC  604


seq1: chrX_153174016_153174854
seq2: B6Ng01-193J17.g_388_1204

seq1  TTAGTTTCTTGACCTGTTTGTGTATTCCAAATGAAATATACATATCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCTTGACCTGTTTGTGTATTCCAAATGAAATATACATATCTGAA  50

seq1  GATTCAAAGTTTATATCCACAAATGAGAGAAAGCATATGATGTTTATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAGTTTATATCCACAAATGAGAGAAAGCATATGATGTTTATCTT  100

seq1  TGTGAGTCTTGGTTATCTCACTCAGAATGTCTTCAACTTCATCTAGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTCTTGGTTATCTCACTCAGAATGTCTTCAACTTCATCTAGTTAC  150

seq1  CTGTTAAAGTTTTGTTTCTCTTAACATCTAAATAATATTCAATTATTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAAGTTTTGTTTCTCTTAACATCTAAATAATATTCAATTATTCAG  200

seq1  ATGTACCACATTTATAATGTCTATTCATGAGTTGATGGTTATCTAGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCACATTTATAATGTCTATTCATGAGTTGATGGTTATCTAGGCTG  250

seq1  TTTCCTATCTCTGGTTATTGTGAATAGAACATAAGCTATCATCTAGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTATCTCTGGTTATTGTGAATAGAACATAAGCTATCATCTAGCAGG  300

seq1  TGTCTCTATAGTAAGATATAGACTCCTATGGCTATATTTCCAATAGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTATAGTAAGATATAGACTCCTATGGCTATATTTCCAATAGTGTA  350

seq1  TAGCTGGATTAGATGGTAAATCTATTTTTAAGTTTTCAAAGACTTCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGATTAGATGGTAAATCTATTTTTAAGTTTTCAAAGACTTCTACA  400

seq1  CCAATTTCCATAGTGGCTGAACCACTTTATACTCCCTCCAGCAATTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTCCATAGTGGCTGAACCACTTTATACTCCCTCCAGCAATTCATA  450

seq1  ATTTCCTACTTTCTTTACACCCTCACCAATATTTGTTCCTGTTTGATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTACTTTCTTTACACCCTCACCAATATTTGTTCCTGTTTGATTCT  500

seq1  GTTTGTTTTTTAAATGATGATGGAGAGATTATCAAAGACTCATCAGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTTAAATGATGATGGAGAGATTATCAAAGACTCATCAGTGTC  550

seq1  AATTTCAGCAGTGGAGAAGACTGAAGCTAATTTGTAGGTCAAGGTGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGCAGTGGAGAAGACTGAAGCTAATTTGTAGGTCAAGGTGTGGG  600

seq1  CTCATCTTACTGATTCTAAACTCACTCTGTAACAGACAAGTAGGTGTAGA  650
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCATCTTACTGATTCTAAACTCACTCTGTAACAGACAAGTA-GTGTAGA  649

seq1  GCTATGAATGTATTTCTTTCTTTTTTTAAAGATTTTTTGTTTGTTTGTTT  700
      |||||| |||||||       | ||||||||||||||   |||||   ||
seq2  GCTATG-ATGTATT------CTCTTTTAAAGATTTTT--GTTGTT--GTT  688

seq1  GTGTGTTTCATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAA  750
      |||||||  |||||||||||||||||||||||||||| ||| ||||||||
seq2  GTGTGTTCAATATGAGTACACTGTAGCTGTCTTCAGA-ACAACAGAAGAA  737

seq1  GGTATCAGATTCCATTATAGATGGTTGCGAGCCATCATGTGATTGAAGGG  800
       |||||||||| |||||| ||| | |||||| ||||||||||| ||| ||
seq2  -GTATCAGATT-CATTAT-GAT-GCTGCGAG-CATCATGTGATGGAA-GG  781

seq1  AATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTTT  839
      |||||||||||||| |||||| ||||| |||||||||||
seq2  AATTGAACTCAGGA-CTCTGG-AGAAC-GTCAGTGCTTT  817


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