BAC Information

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BAC

Clone NameB6Ng01-194O06
ChromosomeX (Build37)
Map Location 129,608,457 - 129,609,274
singlet/doubletsinglet
Overlap genenone
Upstream geneEG631264, LOC665846, LOC665850
Downstream geneLOC665854, LOC100040794, Pcdh19, LOC100040831, Tnmd, Tspan6, Srpx2, Sytl4, LOC665889, Cstf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194O06.bB6Ng01-194O06.g
ACCGA017460GA017461
length1,0951,081
definitionB6Ng01-194O06.b B6Ng01-194O06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaactctgaattttgattagttgttatttcctgtggtgatct
tcatctgttgaaaagagaagggtttattttgtttgttttatttttttaat
taatcattttttgtgtttttttttgtttgttttaatttgggctttatttt
tttaattttaatattttttattacatattttcctcaattacatttccatt
gctatcccaaaagtcccccataccctcccccccccacttccctacccacc
cattcctatttttttggctctggcgttcccctgtactggggcatataaag
tttgtgtgtccaataggcctctctttccagtgatggccgactaggccatc
ttttgatacatatgcagctacagtcaagagctccggggtactggttactt
cataatgttgttccacctatagggttgcagatccctttaactccttgggt
actttctctagctcctccattgggagccctgtgatccatccattagctga
ctgtgagcatccacttctgtgtttgctaggccccagcatagtctcacaag
agacagctatatcagggttctttcagaaaaatcttgctagtgtatgcaat
ggtgtcagcgtttggaagctgattatggggtggatccctggatatggcag
tctctatatggtccatccttttgtcacagctctaaactttgtctctgtaa
ccccttccatgggtgttttgttcccaattctaagaaggggcacagtgtcc
acagtgtccacagtgtccacagtgtccacacttttggtccacacaaaggc
aagaaagaaaggccaagatcataaaatttaattaatcattttattcattt
acatttcaaatatctccattcccagttacccctccacaaaccctccatcc
tcccatcccattccactctgctccctcctcttttttaaaaaaaatctttt
attagatattttcttcattacatttcaaatgttatcctgaaagtcaccta
taccctttcctgccctgctcccacccatccactcttcttctgggcctggc
attccttgccccctcctcttaccctctaggagggtgctctccacc

gaattctctgtttatctctgtacctcatttttaaaattgagttatttggt
ttttggagtctaactttttgagcttgttctatattttgaatattagccct
ctatacagaggatgtagcattagtgaggatcttttctcaatctgttgtgt
gccatttcgtcctattaacagtgtcctttgccttacagaagctttgcagt
ttcatgaagtcccatttatcaactgttgatcttgaggcctgaagtattgg
agttatggtcaggaaattgtctcctataccaatgagttcaaagctctttc
tcactttatcttctattaggtttaatgtatctgtttatatattgaggtcc
tttaatccacttggacttaagtttgtgcagggtaatagtaaatatggatc
tatttgcatacttcttcatgcagacatccagctagaccagcatcattgga
tggagatgttttcttttttccattgtatggttttgggttctttggtgaaa
atcaagggtccttagatctgtgggcatatttttaggtcttctattctatt
ccattgatcaacctgtctttctgtaccaatgccatgtagtttttatcaat
actgctctatagcacagcttgaggtctggaatggtgattcctaaataaat
tcttttattatttaagatggttttgtctatgctgagtttttactttttcg
atatgaagttgagaatttttctttttaagtctgtaaacatgtgttggaat
tttgatagagattgtattaaatatgtagattgcttttgataagattggca
ttttcactatgttaatcctaccatttcgtgagcattggaggtctttccat
cttcttataccttcagtttcttttcctcgggaacttgaagttcttattgt
aaaaattcttttacttgcttgtttagagttatacagatattttatattat
ttgtggcctattgtgaaacgtgtttttttctctaatttctttttctgcat
gtttaatcattagtatcaagagtttaggatttcttttagttagttttata
tcctggcactttgtcagaaggtttgctgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_129608457_129609274
seq2: B6Ng01-194O06.b_329_1137

seq1  TGGGGCATATAAAGTTTGTGTGTCCAATAGGCCTCTCTTTCCAGTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATAAAGTTTGTGTGTCCAATAGGCCTCTCTTTCCAGTGATGG  50

seq1  CCGACTAGGCCATCTTTTGATACATATGCAGCTACAGTCAAGAGCTCCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTAGGCCATCTTTTGATACATATGCAGCTACAGTCAAGAGCTCCGG  100

seq1  GGTACTGGTTACTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGGTTACTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCT  150

seq1  TTAACTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATC  200

seq1  CATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAG  250

seq1  CATAGTCTCACAAGAGACAGCTATATCAGGGTTCTTTCAGAAAAATCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCTCACAAGAGACAGCTATATCAGGGTTCTTTCAGAAAAATCTTG  300

seq1  CTAGTGTATGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGGGTGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTATGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGGGTGGATC  350

seq1  CCTGGATATGGCAGTCTCTATATGGTCCATCCTTTTGTCACAGCTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATATGGCAGTCTCTATATGGTCCATCCTTTTGTCACAGCTCTAAA  400

seq1  CTTTGTCTCTGTAACCCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTCTGTAACCCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAA  450

seq1  GGGGCACAGTGTCCACAGTGTCCACAGTGTCCACAGTGTCCACAC-TTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGGCACAGTGTCCACAGTGTCCACAGTGTCCACAGTGTCCACACTTTTG  500

seq1  GTCCACACAAAGGCAAGAAAGAAAGGCCAAGATCATAAAATTTAATTAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACACAAAGGCAAGAAAGAAAGGCCAAGATCATAAAATTTAATTAAT  550

seq1  CATTTTATTCATTTACATTTCAAATATCTCCATTCCCAGTTACCCCTCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATTCATTTACATTTCAAATATCTCCATTCCCAGTTACCCCTCCA  600

seq1  CAAACCCTCCATCCTCCCATCCCATTCCACTCTGCTCCCTCCTCTTTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTCCATCCTCCCATCCCATTCCACTCTGCTCCCTCCTCTTTTTT  650

seq1  AAAAAAAAATCTTTTATTAGATATTTTCTTCATTTACATTTCAAATGTTA  699
       ||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  -AAAAAAAATCTTTTATTAGATATTTTCTTCA-TTACATTTCAAATGTTA  698

seq1  TCCTGAAAGTCACCTATACCCTTCCCCTGCCCTGCTTCCCAACCCATCCA  749
      |||||||||||||||||||||||  |||||||||||  || |||||||||
seq2  TCCTGAAAGTCACCTATACCCTT-TCCTGCCCTGCT--CCCACCCATCCA  745

seq1  CTCCTCCTTCCTGGCCCTGGCATTCCCCTTGCCCCCTCCTCTTTACCTCT  799
      ||| ||  | |||| |||||||||  |||||||||||||||||  |||||
seq2  CTCTTC--TTCTGGGCCTGGCATT--CCTTGCCCCCTCCTCTTACCCTCT  791

seq1  AGGAGGGTGCTCCTCCACC  818
      ||||||||||| |||||||
seq2  AGGAGGGTGCT-CTCCACC  809


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