BAC Information

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BAC

Clone NameB6Ng01-195N20
ChromosomeX (Build37)
Map Location 125,665,938 - 125,666,957
singlet/doubletsinglet
Overlap geneLOC100040550
Upstream geneLOC100040516, Mdm4-ps, EG237030, LOC100040538
Downstream geneLOC100040562, LOC100040570, LOC669120, Diap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195N20.bB6Ng01-195N20.g
ACCGA018165GA018166
length1,0171,178
definitionB6Ng01-195N20.b B6Ng01-195N20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctgtcctcaaactcatagagatctacctg
cctctgcatcctgaatgctgggattaaaggcgtgtgctaccaccttccag
tgaatagaaacttctatgatttcaggggtcatcattttgtttttatgcat
cagaaaaaagtgaactctactttgatcacacaactagaaaacaaaatatt
tgactgaaaccatcagttgttctaactccaaaccctaaatttttatcttc
tctcttctggagcaccttctataatgctaattattttcattaatgtcacc
tgcacactgtataggatgcttcatgacaattctttgatttttaaaattgt
ttggcaaacagcaagaacagaatacaacatattgcctaagaatttaagat
tcaacactcactatacttcaggtatgcctagtggaacaatgagaaagctt
gtttaccttgacttccacttggtccacattcccctactaattacatgtta
aagatcgtcacatgtttgccaaggaacaaaagacaagattacttacctag
cggatgagggaataaaaaacaattagattattttcaaagtctttattact
agaagaaaccatctggcgattaccatttccttttcttagtgtgcaataaa
catttatggaacaattttgcttaggtttttgccagaaaataaacccatat
tttaggtttctattgtcaagtatctaagttttcttcatgtagatcaccat
atatgctatctcttgccctgtagcatctcaaaggctacataaaatattct
gaaagccacacttttaggtagatcaaggaaagaggttgcagttgacctaa
tgtaacacaacaaggcccagggaattccataactaatatcagaagattta
gacctaaggaagaggccagagctgagccaggataagcactcagcgcacac
atagcacgccaggttcagaatgatattggattaagccggggtagatatga
gggggtgtggtgattct

gaattccaggtagagaaaagcttaggtttatgtgttgtgaatatcacttt
taaaacagcattgaggagacagaagaatggagatttctgagttcaaggtc
agtctatagagcaagtttcatgacagctaatcttagtcagtggagaagtt
gaaaaacagaaagctttacatgcgataattagcagaagaggggcatattc
tagccccagaaaacagcagaacttggtagctttagccatgtggttttgac
tttagagtcaagaatataagaggttactgggacagttgatggtggatata
tggagcttagaaattagtagtgattaataagagaggaacatcactgagat
gaaatcttctggaaagtgttttctgggagcacaaagaagctgtgttccag
aataagcaaggttgtactttttgctgcagctggacttcgcaatgtgtaag
agtcacccagctggtactgattttgaaggcatggatagatcatcaaaagc
agctgaggctagggaaagtgaaggtgaagcctcagttgcagttggtggcc
caggcaggactgaaggagtcatgcaaagaagttgaggtttggtaccctga
atggagcctatgaggggctattggtgaagctcagttttagtagaagactc
cagtaaattggagatgccagtgtaatgggctgatcacaaagcacagcatc
agcagtgggatcaaccagaatgctacagagggcagaacaagagaagtgac
caaagccctttggaggagcccacaagatcatgtgtgaagacactggaaca
agaagctataaggttgaggttgacttggatatcacaagatgtagagatgc
caggtctgtgggatacctgctgaggaaatctgctaacagggagtagaacc
agcccaaagaaggaagtttgttgctgctgaatgcaatctgtttacaatca
caaagaactcacacatatgtactcactgaataagtggatattaagacgag
aaacttagaataccaagatataagatacagttgcaaaacacaatgtaaac
tctaagaacaaagacaaactgtggaaccttttgccctctttctagaatga
acaaacacccatgaatggactacatgactacgttgagcttgaggatagta
tgtacacctactctcgtaaaatcgtgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125665938_125666957
seq2: B6Ng01-195N20.b_46_1062

seq1  GAATTCACTTTGTAGACCAGGCTGTCCTCAAACTCATAGAGATCTACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGTCCTCAAACTCATAGAGATCTACCTG  50

seq1  CCTCTGCATCCTGAATGCTGGGATTAAAGGCGTGTGCTACCACCTTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCATCCTGAATGCTGGGATTAAAGGCGTGTGCTACCACCTTCCAG  100

seq1  TGAATAGAAACTTCTATGATTTCAGGGGTCATCATTTTGTTTTTATGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGAAACTTCTATGATTTCAGGGGTCATCATTTTGTTTTTATGCAT  150

seq1  CAGAAAAAAGTGAACTCTACTTTGATCACACAACTAGAAAACAAAATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAGTGAACTCTACTTTGATCACACAACTAGAAAACAAAATATT  200

seq1  TGACTGAAACCATCAGTTGTTCTAACTCCAAACCCTAAATTTTTATCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAAACCATCAGTTGTTCTAACTCCAAACCCTAAATTTTTATCTTC  250

seq1  TCTCTTCTGGAGCACCTTCTATAATGCTAATTATTTTCATTAATGTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGGAGCACCTTCTATAATGCTAATTATTTTCATTAATGTCACC  300

seq1  TGCACACTGTATAGGATGCTTCATGACAATTCTTTGATTTTTAAAATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTGTATAGGATGCTTCATGACAATTCTTTGATTTTTAAAATTGT  350

seq1  TTGGCAAACAGCAAGAACAGAATACAACATATTGCCTAAGAATTTAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAAACAGCAAGAACAGAATACAACATATTGCCTAAGAATTTAAGAT  400

seq1  TCAACACTCACTATACTTCAGGTATGCCTAGTGGAACAATGAGAAAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTCACTATACTTCAGGTATGCCTAGTGGAACAATGAGAAAGCTT  450

seq1  GTTTACCTTGACTTCCACTTGGTCCACATTCCCCTACTAATTACATGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCTTGACTTCCACTTGGTCCACATTCCCCTACTAATTACATGTTA  500

seq1  AAGATCGTCACATGTTTGCCAAGGAACAAAAGACAAGATTACTTACCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCGTCACATGTTTGCCAAGGAACAAAAGACAAGATTACTTACCTAG  550

seq1  CGGATGAGGGAATAAAAAACAATTAGATTATTTTCAAAGTCTTTATTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATGAGGGAATAAAAAACAATTAGATTATTTTCAAAGTCTTTATTACT  600

seq1  AGAAGAAACCATCTGGCGATTACCATTTCCTTTTCTTAGTGTGCAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAACCATCTGGCGATTACCATTTCCTTTTCTTAGTGTGCAATAAA  650

seq1  CATTTATGGAACAATTTTGCTTAGGTTTTTGCCAGAAAATAAACCCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGGAACAATTTTGCTTAGGTTTTTGCCAGAAAATAAACCCATAT  700

seq1  TTTAGGTTTCTATTGTCAAGTATCTAAGTTTTCTTCATGTAGATCACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTTTCTATTGTCAAGTATCTAAGTTTTCTTCATGTAGATCACCAT  750

seq1  ATATGCTATCTCTTGCCCTGTAGCATCTCAAAGGCTACATAAAATATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTATCTCTTGCCCTGTAGCATCTCAAAGGCTACATAAAATATTCT  800

seq1  GAAAGCCACACTTTTAGGTAGATCAAGGAAAGAGGTTGCAGTTGACCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCACACTTTTAGGTAGATCAAGGAAAGAGGTTGCAGTTGACCTAA  850

seq1  TGTAACACAACAAGGCCCAGGGAATTCCATAACTAATATCAGAAGATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACACAACAAGGCCCAGGGAATTCCATAACTAATATCAGAAGATTTA  900

seq1  GACCTAAGGAAGAGGCCAGAGCTGAGCCAGGATAAGGCACTCAGCGCACA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACCTAAGGAAGAGGCCAGAGCTGAGCCAGGATAA-GCACTCAGCGCACA  949

seq1  CATAGCACGCCAGGTTCAGGAATGATATTGGAATTAAGCCGGGGTAAGAT  1000
      |||||||||||||||||| |||||||||||| ||||||||||||| ||||
seq2  CATAGCACGCCAGGTTCA-GAATGATATTGG-ATTAAGCCGGGGT-AGAT  996

seq1  ATGA-GGGGTGTGGTGATTCT  1020
      |||| ||||||||||||||||
seq2  ATGAGGGGGTGTGGTGATTCT  1017


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