BAC Information

Click to search

BAC

Clone NameB6Ng01-197E14
ChromosomeX (Build37)
Map Location 85,769,621 - 85,770,773
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667876, EG667883
Downstream geneLOC667891, EG245506, LOC667911, LOC100041707, EG436213, LOC667919, LOC100041727, LOC667934, Pet2, EG629419
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197E14.bB6Ng01-197E14.g
ACCGA019191GA019192
length1,1681,229
definitionB6Ng01-197E14.b B6Ng01-197E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatccttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctcagaatctagttagatgatcatgtgttttttgtcttt
gagtttgtctatatagtggattacattgatggatttctgtatgttgaaac
atccctgtatccctgggatgaatcctacttgatcatgatggatgatcatt
ttcatctgtttttggattttatttgcaagaattttattgaatattttgca
tcaatattcataagggaaattgctctgatgttcttattctttattgggtc
tttgtatggtttaggtaccagagaaattgaggcttcagagaatgaattga
gtagagtaccttctgcttctcttaaggaataatttgaggagtattggaat
taggtcacactaccacacataagtgttatatggaagcagcaaacataaca
atctcccagaagtgttagttgggtctatgtaattttaacaaagccacaat
ttcctaaactgaacattgctcttctatgatctcaagtttgggaagcaggt
gagagtgaagaggaaatacaggtttggatacaatacataatgtacattgg
aggaggtgtgtcactggggtgagctttcagatttcaaaagcccgtgcttt
ttccaattgcctatttttctgcctctaacttgcatataagatgtcagctc
tcatcttttgatacagcaccaagcctgttggcctgctgctatgcttacta
ccatgaaggtcatggactcaccctctgaaactggaagaaaactccaaata
aactcttctataagttgtcttagtcatgatatctcctcaaatcaatagag
atgtaaccataccagcaatgtaatgttaaaagtactgtaatgtaaagtag
tataactatggaaaaccaaggaaataaaaaaaagacagaattgggtagaa
agaacccgaggctagtgtaaaataaagctgaaaagtcaagaaggcagtgc
accattaagatgtatgatgggatggagctagactctttgcagacatgtta
cttattggtggcaacctggttctttattgagggaactgctaacagcttga
gccaggcttgttcttctgacactgttgcccttctgttctaactagggttc
cattggcctatgaagaga

gaattcatttaccagttcctggaaccaaaatgtttgtttgcctagatata
tttctttgtcatcttctttggaagtgtagtatacaaggactcctagtaat
ggggtatttggatcctgagcaggctactttctctagccaggcaagggttc
cagttgtaagactggggtctaccctgccataaaaatcaatggcctactat
ctgtcctatttgcaagattttctggggtaattgtggaataaaacttatgg
gagtggctaagcattgactgaccaccaggagacaaagtccttgactcaca
ttgccttgatagtcaggaaccagaggctgtataacccaaagaccaaggat
aaaaccaaacatgactagccaaaataaaattttaaaaagtcaatgaaata
attccatcatccagcatctgatggatgcagttgcagagaccaatattaag
ttgtagccaaatattaggcagggcgagaggaatcctcttgatgagagaga
aattatctatgaaccagaggattcaaggacccataggagcacaacctatg
gaatcaactaagcggggttcacagggttaaaacgaaaatcacaaaacctg
catggatctgaagtagttcctctgaatatatgatatggtgtataactgtg
tgttcttgtggaactcctaaaaatgagagttgaagggtgtcaatcccttt
ttctcctacttggttgccttgtccagccttgatattagggtttgtaccta
gtctttcttgtagctttttatgctttgtccagttgatatccctggggagg
gcctacttctttttctgaagataaacagagggagtagtgggaacattgag
agggggtgagagaggagagacttgggaggagtgaagacaagtggaaactt
gtttttagacgtgtgagagtagaattaaattgtataaccatactatacac
acataacattccatatcattaaaataacataggtagttggttatgtggtg
gagaaaataaataaacaaataaattaatataatctggaaactctcttctt
gaaataatcattattatattacgcatttttcctccaattacatttctaat
tgcttatccaaaaggtccgtaccttcccaaaccacttccgctacccaccc
aattccaatttttttgactgggattaccttgggtactggggcaaataaag
gcttgcccggaaccaagggggccctctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_85769621_85770773
seq2: B6Ng01-197E14.b_44_1211

seq1  GAATTCCTGATCCTTCCAAGACTTTTATCATGAATGGGTGTTGGATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCCTTCCAAGACTTTTATCATGAATGGGTGTTGGATTTTG  50

seq1  TCAAATGCTTTCTCAGAATCTAGTTAGATGATCATGTGTTTTTTGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTTTCTCAGAATCTAGTTAGATGATCATGTGTTTTTTGTCTTT  100

seq1  GAGTTTGTCTATATAGTGGATTACATTGATGGATTTCTGTATGTTGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGTCTATATAGTGGATTACATTGATGGATTTCTGTATGTTGAAAC  150

seq1  ATCCCTGTATCCCTGGGATGAATCCTACTTGATCATGATGGATGATCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGTATCCCTGGGATGAATCCTACTTGATCATGATGGATGATCATT  200

seq1  TTCATCTGTTTTTGGATTTTATTTGCAAGAATTTTATTGAATATTTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGTTTTTGGATTTTATTTGCAAGAATTTTATTGAATATTTTGCA  250

seq1  TCAATATTCATAAGGGAAATTGCTCTGATGTTCTTATTCTTTATTGGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATTCATAAGGGAAATTGCTCTGATGTTCTTATTCTTTATTGGGTC  300

seq1  TTTGTATGGTTTAGGTACCAGAGAAATTGAGGCTTCAGAGAATGAATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGGTTTAGGTACCAGAGAAATTGAGGCTTCAGAGAATGAATTGA  350

seq1  GTAGAGTACCTTCTGCTTCTCTTAAGGAATAATTTGAGGAGTATTGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTACCTTCTGCTTCTCTTAAGGAATAATTTGAGGAGTATTGGAAT  400

seq1  TAGGTCACACTACCACACATAAGTGTTATATGGAAGCAGCAAACATAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCACACTACCACACATAAGTGTTATATGGAAGCAGCAAACATAACA  450

seq1  ATCTCCCAGAAGTGTTAGTTGGGTCTATGTAATTTTAACAAAGCCACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCAGAAGTGTTAGTTGGGTCTATGTAATTTTAACAAAGCCACAAT  500

seq1  TTCCTAAACTGAACATTGCTCTTCTATGATCTCAAGTTTGGGAAGCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAACTGAACATTGCTCTTCTATGATCTCAAGTTTGGGAAGCAGGT  550

seq1  GAGAGTGAAGAGGAAATACAGGTTTGGATACAATACATAATGTACATTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGAAGAGGAAATACAGGTTTGGATACAATACATAATGTACATTGG  600

seq1  AGGAGGTGTGTCACTGGGGTGAGCTTTCAGATTTCAAAAGCCCGTGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGTGTCACTGGGGTGAGCTTTCAGATTTCAAAAGCCCGTGCTTT  650

seq1  TTCCAATTGCCTATTTTTCTGCCTCTAACTTGCATATAAGATGTCAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTGCCTATTTTTCTGCCTCTAACTTGCATATAAGATGTCAGCTC  700

seq1  TCATCTTTTGATACAGCACCAAGCCTGTTGGCCTGCTGCTATGCTTACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTTGATACAGCACCAAGCCTGTTGGCCTGCTGCTATGCTTACTA  750

seq1  CCATGAAGGTCATGGACTCACCCTCTGAAACTGGAAGAAAACTCCAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGGTCATGGACTCACCCTCTGAAACTGGAAGAAAACTCCAAATA  800

seq1  AACTCTTCTATAAGTTGTCTTAGTCATGATATCTCCTCAAATCAATAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTCTATAAGTTGTCTTAGTCATGATATCTCCTCAAATCAATAGAG  850

seq1  ATGTAACCATACCAGCAATGTAATG-TAAAAGTACTGTAATGTAAAGTAG  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGTAACCATACCAGCAATGTAATGTTAAAAGTACTGTAATGTAAAGTAG  900

seq1  TATAACTATGGAAAACCAAGGAAAT-AAAAAAAGACAGAA-TGGGTAG-A  946
      ||||||||||||||||||||||||| |||||||||||||| ||||||| |
seq2  TATAACTATGGAAAACCAAGGAAATAAAAAAAAGACAGAATTGGGTAGAA  950

seq1  AGAA-CCGAGGCTAGTGTAAAATAGAGCTGAAAAGT-AAGAAGGCAGTGC  994
      |||| ||||||||||||||||||| ||||||||||| |||||||||||||
seq2  AGAACCCGAGGCTAGTGTAAAATAAAGCTGAAAAGTCAAGAAGGCAGTGC  1000

seq1  ACCATTAAGAATGTATGATGGGATGGAGCTAGACTCTTTGCAGACATGTA  1044
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  ACCATTAAG-ATGTATGATGGGATGGAGCTAGACTCTTTGCAGACATGTT  1049

seq1  AC-TATTG--TGCAACCTGG-TCTTTA-TGAGGG-ACTGCTAACAGCTGG  1088
      || |||||   ||||||||| |||||| |||||| ||||||||||||| |
seq2  ACTTATTGGTGGCAACCTGGTTCTTTATTGAGGGAACTGCTAACAGCTTG  1099

seq1  AGCAGGGGCTGT--CTCTGACACTGTTG-CCTTCTGTCTTAGCTAGGGTT  1135
      |||  ||  |||   ||||||||||||| ||||||||  || |||||| |
seq2  AGCCAGGCTTGTTCTTCTGACACTGTTGCCCTTCTGTTCTAACTAGGG-T  1148

seq1  TCCATTG--CTATGAAGAGA  1153
      |||||||  |||||||||||
seq2  TCCATTGGCCTATGAAGAGA  1168


| Home | SequenceCutter | Blast | Download |