BAC Information

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BAC

Clone NameB6Ng01-198J05
ChromosomeX (Build37)
Map Location 127,935,238 - 127,936,016
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040092, LOC665773, LOC665799, LOC670449
Downstream geneLOC245600, EG631264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198J05.bB6Ng01-198J05.g
ACCGA020135GA020136
length7811,183
definitionB6Ng01-198J05.b B6Ng01-198J05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagccaggacttcctgtatactagacaagcactttccttactga
gccataagcacagccctccatcagaacttctctgtgcaaatgtttaatat
aatcttctctgataaaaaatgctatttttgttgagagtggaatttgggta
aacatgatgagagtcagctctcattgccatgacaaaatatagaggctaaa
gcagtttaacaacaaccttgttttcacaactcttgggctagaaatccaag
attaagctgtcagggtggttggttttgatgctaataactatttgtggatg
gtttcctggcatgctggcagaggccttcttttgtttttgtttttattatt
attattattattattattattatattcttctcctatatgatgcattccaa
ctgcagctttccttctctacactcctcccagtatccaccacacattctcc
tctcctccattttcctacagaaaaaaacagacttgccagggatttcaatt
gaacatagcataagaagttgcaaagagactaggcacataccctcatgtga
atgctggaggaagcaacccaatagaaggaaaaggttcccaagatcagtca
ggagtcagagaaacctctacgtccagtgttaggaataccagaaaacctca
agctaaacaaccatggctatatgcagaggacttaacacagacccattcaa
gttccctgcctgcatcttcagtctgacagatgccttcctaaatgaggttt
tgggcaaggggaatggggtgggatttggttt

gaattcccaaaaccaatatgactgtacttggagatcttctaaggaaatat
ttaagtgatgtcatgatttgataggactggaggcttatgaaaagcaagag
gaactcataaaaggaagtttcgtgtgagggcatggtggccatcaacaata
tggatgagaccctttaccagaaatcactccccatcaaactccatctgaca
tgtctagcctccagaatctgtgaagcagttaattcgctctgctcatgatc
ccaggctgtagcacttggggactgtaggttaggcagaccactctaccaca
atgattctttgtgtattttgtcttcatacctctgttgctgagtttgccta
aaaatattcattcttattaactttaaattcatggccacaaattttaagta
catacttaatgatgcctgacaatcataataaacttctcaacttatttaat
tgtttccctctcttagataaatattttaaattgtttttactctgcatact
ctcaacactccaatacccagcagtatgaaggccaataaacttgttttttt
tttttttcaccagaaacctgaagtaaaacaacctggaataaaaaaattca
gagatcacatcaaaatgatccctctacaagcatctcaaaacagtgttaga
gtcttatatactaccacaaataaaaacctcatatcgccatctaaaatatt
tattgcttttatggattattttccaagccttttccactgctcagagacat
cctcccatttctgtattattaattgtttcctctttcccgaatcaattcat
ttgcatgtaaacatagcattactttcccctattgaaacaaagcaaaacaa
acaaaatggcctctttgtccccatctcctctaccaattaactaatgcctt
ttttatttgttatctttttcaacaaaactctataaaagttctttttttaa
tattggtacattaacaatttccatcaattctccaaaaattttaatttcag
gttttacttccagcagcaagaattagaattgttcttcttaaatgttgtca
aataagtgaacctccctgttcataattttaagtgaacaaatttcttccgt
cttcatacttgaatacagggtaacttgtttcaactagagttggcttaagt
agagtgaatacattaggcaaggtccttggcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_127935238_127936016
seq2: B6Ng01-198J05.b_46_826

seq1  GAATTCAAGCCAGGACTTCCTGTATACTAGACAAGCACTTTCCTTACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCAGGACTTCCTGTATACTAGACAAGCACTTTCCTTACTGA  50

seq1  GCCATAAGCACAGCCCTCCATCAGAACTTCTCTGTGCAAATGTTTAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAGCACAGCCCTCCATCAGAACTTCTCTGTGCAAATGTTTAATAT  100

seq1  AATCTTCTCTGATAAAAAATGCTATTTTTGTTGAGAGTGGAATTTGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTCTGATAAAAAATGCTATTTTTGTTGAGAGTGGAATTTGGGTA  150

seq1  AACATGATGAGAGTCAGCTCTCATTGCCATGACAAAATATAGAGGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATGAGAGTCAGCTCTCATTGCCATGACAAAATATAGAGGCTAAA  200

seq1  GCAGTTTAACAACAACCTTGTTTTCACAACTCTTGGGCTAGAAATCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTAACAACAACCTTGTTTTCACAACTCTTGGGCTAGAAATCCAAG  250

seq1  ATTAAGCTGTCAGGGTGGTTGGTTTTGATGCTAATAACTATTTGTGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCTGTCAGGGTGGTTGGTTTTGATGCTAATAACTATTTGTGGATG  300

seq1  GTTTCCTGGCATGCTGGCAGAGGCCTTCTTTTGTTTTTGTTTTTATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTGGCATGCTGGCAGAGGCCTTCTTTTGTTTTTGTTTTTATTATT  350

seq1  ATTATTATTATTATTATTATTATATTCTTCTCCTATATGATGCATTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTATTATTATATTCTTCTCCTATATGATGCATTCCAA  400

seq1  CTGCAGCTTTCCTTCTCTACACTCCTCCCAGTATCCACCACACATTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCTTTCCTTCTCTACACTCCTCCCAGTATCCACCACACATTCTCC  450

seq1  TCTCCTCCATTTTCCTACAGAAAAAAACAGACTTGCCAGGGATTTCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCATTTTCCTACAGAAAAAAACAGACTTGCCAGGGATTTCAATT  500

seq1  GAACATAGCATAAGAAGTTGCAAAGAGACTAGGCACATACCCTCATGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAGCATAAGAAGTTGCAAAGAGACTAGGCACATACCCTCATGTGA  550

seq1  ATGCTGGAGGAAGCAACCCAATAGAAGGAAAAGGTTCCCAAGATCAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGAGGAAGCAACCCAATAGAAGGAAAAGGTTCCCAAGATCAGTCA  600

seq1  GGAGTCAGAGAAACCTCTACGTCCAGTGTTAGGAATACCAGAAAACCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAGAGAAACCTCTACGTCCAGTGTTAGGAATACCAGAAAACCTCA  650

seq1  AGCTAAACAACCATGGCTATATGCAGAGGACTTAACACAGACCCATTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAACAACCATGGCTATATGCAGAGGACTTAACACAGACCCATTCAA  700

seq1  GTTCCCTGCCTGCATCTTCAGTCTGACAGATGCCTTCCTAAATGAGG-TT  749
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTTCCCTGCCTGCATCTTCAGTCTGACAGATGCCTTCCTAAATGAGGTTT  750

seq1  TGGGCAAGGGGAATGGGGTGGGA-TTGGTTT  779
      ||||||||||||||||||||||| |||||||
seq2  TGGGCAAGGGGAATGGGGTGGGATTTGGTTT  781


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