BAC Information

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BAC

Clone NameB6Ng01-199C20
ChromosomeX (Build37)
Map Location 80,321,954 - 80,322,680
singlet/doubletsinglet
Overlap geneDmd
Upstream geneEG629310
Downstream geneTsga8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199C20.bB6Ng01-199C20.g
ACCGA020579GA020580
length1,152727
definitionB6Ng01-199C20.b B6Ng01-199C20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacagaacaaatatgaaataaataagcctaataatcacacaa
aataggctgtctatgaacataaagatatatactgtaaattaatatataat
agtaactcatgtatgtaaaacttttatatgcaacataaaaatattctcaa
acacaaatgccatctttattggcattaaaatcttttattttatacataca
tatatatatatatgtgtatgtatatattaatatatgaaggcagtactagt
tttaaaacatactaaaatatcaaattttaatataacaaaaagaaatttta
tttcagtctagttgataaagatattcatccatacacagctttatttgcca
aaataaatgttagcatttttaatagggcaacgtaaattggcaaaaaatat
ttttgtgacaacatgtatcatggaatatttgcacatctatgcactttcca
aaaaaatttcaatatcatttcacttaataatgtgtatttctggacagtgc
caaagatgacaaaaggcagattatttaaaataacccgattaaaaatgggg
tacagagctaaacaaagaattctcaactgaggaataccgaatggctgaga
agcacctgaaaaaatgttcaacatccttaatcatcagggaaatgcaaatc
aaaacaaccctgagattccacctcacaccagtcagaatggctaagatcaa
aaattcacgtgacagcagatgctggcaaggatgtaaagaaagaggaacac
tactccattgctggtgggattgcaagcatgtacaaccactctggaagtca
gtccggaggttcctcagaaaattggaaataatactaccggaagatccagc
aatacctctcctgggcatatacccagaagatgttccaactgataataagg
gcacattgatccactatgttcatagcagccttattttacaatagccagaa
gctggaaaagaacacagatgtcccttcaacagaaggaatggatacagaaa
atggtggttacatttaccacgatggagtattctcacctatttaaaaccat
ttatttataaattcttggacaatgattgtatctggaagatatccatctta
ctgtagattacgaattctacaaaatagtccattagatttattgcactcac
ct

gaattcttttctggtgattgttctttgtgtaatgcagaaaagtgtattgt
aaggacagaatagctacacacatctttgcaatatgtctcagaggaatact
ctgactctgagatttggttttgtttgcatatactgggttgctttctcaga
gtaatcagactatttcttaatatcttttgctttttctgtttcatttacaa
ttttatttcatatatgtgttcattatcttaaattaggcatgttgctaccc
acagattaaaaaggatgtctacatagtttcctcctagagaagtaaattgt
aaaagaataggaaagagagaagtggaggtagatttaagaagttaggtata
gaacatggtgcagaaactgggatttgtgattctaaagaaaatagaaatga
attacattatttttgtttacctttttatctacctacatattttgaaatta
ataatgcattcccttaataagaacatagttctagtagttcttaaagcaca
tctgctgcattaaactctaacctaggaattgcatccatagcttttaccga
gataaacttccaatgttagtgcagcaagaactggccggtagggtgtttgg
gataccaggagaaatctcctcgacatttgttttatattactgctaatatg
tgtaaattgaggaacaagtttgtggatatatacatacatatatatgtatg
tatgtatgtatgtatgtatgtatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_80321954_80322680
seq2: B6Ng01-199C20.g_64_790

seq1  GAATTCTTTTCTGGTGATTGTTCTTTGTGTAATGCAGAAAAGTGTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTGGTGATTGTTCTTTGTGTAATGCAGAAAAGTGTATTGT  50

seq1  AAGGACAGAATAGCTACACACATCTTTGCAATATGTCTCAGAGGAATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGAATAGCTACACACATCTTTGCAATATGTCTCAGAGGAATACT  100

seq1  CTGACTCTGAGATTTGGTTTTGTTTGCATATACTGGGTTGCTTTCTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTGAGATTTGGTTTTGTTTGCATATACTGGGTTGCTTTCTCAGA  150

seq1  GTAATCAGACTATTTCTTAATATCTTTTGCTTTTTCTGTTTCATTTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAGACTATTTCTTAATATCTTTTGCTTTTTCTGTTTCATTTACAA  200

seq1  TTTTATTTCATATATGTGTTCATTATCTTAAATTAGGCATGTTGCTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCATATATGTGTTCATTATCTTAAATTAGGCATGTTGCTACCC  250

seq1  ACAGATTAAAAAGGATGTCTACATAGTTTCCTCCTAGAGAAGTAAATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTAAAAAGGATGTCTACATAGTTTCCTCCTAGAGAAGTAAATTGT  300

seq1  AAAAGAATAGGAAAGAGAGAAGTGGAGGTAGATTTAAGAAGTTAGGTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATAGGAAAGAGAGAAGTGGAGGTAGATTTAAGAAGTTAGGTATA  350

seq1  GAACATGGTGCAGAAACTGGGATTTGTGATTCTAAAGAAAATAGAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGTGCAGAAACTGGGATTTGTGATTCTAAAGAAAATAGAAATGA  400

seq1  ATTACATTATTTTTGTTTACCTTTTTATCTACCTACATATTTTGAAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTATTTTTGTTTACCTTTTTATCTACCTACATATTTTGAAATTA  450

seq1  ATAATGCATTCCCTTAATAAGAACATAGTTCTAGTAGTTCTTAAAGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCATTCCCTTAATAAGAACATAGTTCTAGTAGTTCTTAAAGCACA  500

seq1  TCTGCTGCATTAAACTCTAACCTAGGAATTGCATCCATAGCTTTTACCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCATTAAACTCTAACCTAGGAATTGCATCCATAGCTTTTACCGA  550

seq1  GATAAACTTCCAATGTTAGTGCAGCAAGAACTGGCCGGTAGGGTGTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACTTCCAATGTTAGTGCAGCAAGAACTGGCCGGTAGGGTGTTTGG  600

seq1  GATACCAGGAGAAATCTCCTCGACATTTGTTTTATATTACTGCTAATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCAGGAGAAATCTCCTCGACATTTGTTTTATATTACTGCTAATATG  650

seq1  TGTAAATTGAGGAACAAGTTTGTGGATATATACATACATATATATGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTGAGGAACAAGTTTGTGGATATATACATACATATATATGTATG  700

seq1  TATGTATGTATGTATGTATGTATGTGT  727
      |||||||||||||||||||||||||||
seq2  TATGTATGTATGTATGTATGTATGTGT  727


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