BAC Information

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BAC

Clone NameB6Ng01-201C03
ChromosomeX (Build37)
Map Location 116,205,397 - 116,206,551
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
Downstream geneLOC385417, Pabpc5, LOC236983, LOC674318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201C03.bB6Ng01-201C03.g
ACCGA021993GA021994
length1,1481,048
definitionB6Ng01-201C03.b B6Ng01-201C03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttacaataccttagggcttattcatgtatgttgatgtaggt
ataaagtgtaagacttcaaaatacatccattatttacaatggggaatttt
aaaataaaaaaaatgctatagtgataagaaggggcattcatgaatacgac
aaccaaatcagtaagaacttcaatcataatactagagatgagagaaatct
ggtcaagaaaatacaatctcttttggatacttaacattccagccaggtgt
gcttgttcacatggcaagaacgaccacctctaggaatgccagatcacttt
aaaccatgttaaaagcatgggcagaataaatagtcctttaaggagatact
gtaattttccacctcagaatcccttcctgtaggacagcctctattgacag
tgtgattattttatagatctaagtgaaaaggagtaagcaggacaaaaaga
tatgtacagttttaggagaaaaagagcaccaatacataaagttagtgcca
agctctcttttcaaatgtaaaatgtttaaataaaggcatgttttattagc
tttagtttttccaagttctgcttttaatgatctttcttaaatgcttttcc
ctctgttctagcccaccacccagaggtaatataaaagaaaggatatggga
aagtgaacctttttagaaatggttatttggatattctaaatttctggtct
tatcagtgagtacatatcatgtgagttcttttgtgattgggtaacctcac
tcaggatgatatcctccagatcaatccatttgactaagaatttcataaat
taattttttaatagctgagtagtaatccatcgtataagtgtaccacaatt
tctgtatccattcctctgttgaaggacatctgggttctttccaccttttg
gctattgtaaataagcatgctatgaacatagtgaagcagtgtccatatta
caagttgggaacatcttctgggtatatgccagaagaggtattgctggata
ttctggtagtactatatccaatttcttgagactgccaactgaatttcaag
cttgatggtaccagcttgcaatccacagcatggagagtgtccttgtttta
ccacatcttgccagaatctgcctgtactgatttttttaatctaagtca

gaattcatttcttggtcttcaattccactccattgatcttctttcctgtt
actataccaataccactcagtttttatcacaattactctgtagtacagct
tgacatctaggatggtgattccaatagaagttctttcattgttgagaaga
gtttttactatcttagttttttttttttaattccagatgaatatgcaaat
tgctatttctaactctatgaagaatttatttggaattttgatggggattg
cattgaatctatagactgcttttgtcaaaatgtcatttttactatattaa
tcctgccaatctatgagcatgggagatctttccattttctgagatcttct
tcagagacttgaaattcttgtcatatagatctttcactcactgagttaga
gtcacaccaaggtattttatgttatttgtgactattaggaagggtgatgt
ttccctaatttctttctcagcctatttatcctttttgaagagataggcca
ctgatttgtttgatgtaattttatatacatctattttgctgaagtttttt
tttttttttttaatcaagtttaagatttctctggtgaaatttttgaggtc
agttaaatatgctatcaaatcattggctaatagtgatatttttacttctt
tttgtccaatttggatccctttgaactccttttgttgtctaattgcttcc
actaggatatcaagtactatattaactaggtggggacaaaatgagaatcc
ttgtcagatgtctggttttagttggattgcttctagtttctttccactta
tcttgatgttggctactgggtttgttgtatattgcttttactaagtttaa
gggtgggcctttgaaattcctgatctttcccaatacttttatcaggaagg
tgtattggatttgtgtcaaatgttttctcagcatctaatgaagatcaata
tgtttcctccccccaacttagggtttgtttaatatagaggattatgtgat
ggatttccataatgaacatgccctgtaccctggaatgaagctaacttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_116205397_116206551
seq2: B6Ng01-201C03.b_42_1189

seq1  GAATTCTCTTTACAATACCTTAGGGCTTATTCATGTATGTTGATGTAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTACAATACCTTAGGGCTTATTCATGTATGTTGATGTAGGT  50

seq1  ATAAAGTGTAAGACTTCAAAATACATCCATTATTTACAATGGGGAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTGTAAGACTTCAAAATACATCCATTATTTACAATGGGGAATTTT  100

seq1  AAAATAAAAAAAATGCTATAGTGATAAGAAGGGGCATTCATGAATACGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAAAATGCTATAGTGATAAGAAGGGGCATTCATGAATACGAC  150

seq1  AACCAAATCAGTAAGAACTTCAATCATAATACTAGAGATGAGAGAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATCAGTAAGAACTTCAATCATAATACTAGAGATGAGAGAAATCT  200

seq1  GGTCAAGAAAATACAATCTCTTTTGGATACTTAACATTCCAGCCAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGAAAATACAATCTCTTTTGGATACTTAACATTCCAGCCAGGTGT  250

seq1  GCTTGTTCACATGGCAAGAACGACCACCTCTAGGAATGCCAGATCACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTCACATGGCAAGAACGACCACCTCTAGGAATGCCAGATCACTTT  300

seq1  AAACCATGTTAAAAGCATGGGCAGAATAAATAGTCCTTTAAGGAGATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGTTAAAAGCATGGGCAGAATAAATAGTCCTTTAAGGAGATACT  350

seq1  GTAATTTTCCACCTCAGAATCCCTTCCTGTAGGACAGCCTCTATTGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTCCACCTCAGAATCCCTTCCTGTAGGACAGCCTCTATTGACAG  400

seq1  TGTGATTATTTTATAGATCTAAGTGAAAAGGAGTAAGCAGGACAAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTATTTTATAGATCTAAGTGAAAAGGAGTAAGCAGGACAAAAAGA  450

seq1  TATGTACAGTTTTAGGAGAAAAAGAGCACCAATACATAAAGTTAGTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACAGTTTTAGGAGAAAAAGAGCACCAATACATAAAGTTAGTGCCA  500

seq1  AGCTCTCTTTTCAAATGTAAAATGTTTAAATAAAGGCATGTTTTATTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTTTTCAAATGTAAAATGTTTAAATAAAGGCATGTTTTATTAGC  550

seq1  TTTAGTTTTTCCAAGTTCTGCTTTTAATGATCTTTCTTAAATGCTTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTTCCAAGTTCTGCTTTTAATGATCTTTCTTAAATGCTTTTCC  600

seq1  CTCTGTTCTAGCCCACCACCCAGAGGTAATATAAAAGAAAGGATATGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCTAGCCCACCACCCAGAGGTAATATAAAAGAAAGGATATGGGA  650

seq1  AAGTGAACCTTTTTAGAAATGGTTATTTGGATATTCTAAATTTCTGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACCTTTTTAGAAATGGTTATTTGGATATTCTAAATTTCTGGTCT  700

seq1  TATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTAACCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGTAACCTCAC  750

seq1  TCAGGATGATATCCTCCAGATCAATCCATTTGACTAAGAATTTCATAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGATATCCTCCAGATCAATCCATTTGACTAAGAATTTCATAAAT  800

seq1  TAATTTTTTAATAGCTGAGTAGTAATCCATCGTATAAGTGTACCACAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTAATAGCTGAGTAGTAATCCATCGTATAAGTGTACCACAATT  850

seq1  TCTGTATCCATTCCTCTGTTGAAGGACATCTGGGTTCTTTCCACCTTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCCATTCCTCTGTTGAAGGACATCTGGGTTCTTTCCACCTTTTG  900

seq1  GCTATTGTAAATAAGCATGCTATGAACATAGTGAAGCAGGTGTCCATATT  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTATTGTAAATAAGCATGCTATGAACATAGTGAAGCA-GTGTCCATATT  949

seq1  ACAAGTT-GGAACATCTTCTGGGTATATGCCCAGAAGAGGTATTGCTGGA  999
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAAGTTGGGAACATCTTCTGGGTATATG-CCAGAAGAGGTATTGCTGGA  998

seq1  TATTCTGGTAGTACTATATCCAATTTC-TGAGGAACTGCCAAACTG-ATT  1047
      ||||||||||||||||||||||||||| ||||  |||||| ||||| |||
seq2  TATTCTGGTAGTACTATATCCAATTTCTTGAG--ACTGCC-AACTGAATT  1045

seq1  TCCAGCTTGATGGTACCAGCTTGCAATTCCACCAGCAATGGAGGAGTGTT  1097
      || ||||||||||||||||||||||| |||| |||| ||||| |||||| 
seq2  TCAAGCTTGATGGTACCAGCTTGCAA-TCCA-CAGC-ATGGA-GAGTGTC  1091

seq1  CCTGTTTTACCACATCCTTGCCAGAATCTGCTGTTACCTGAATTTTTT-A  1146
      | ||||||||||||| |||||||||||||||   || |||| |||||| |
seq2  CTTGTTTTACCACAT-CTTGCCAGAATCTGCCTGTA-CTGATTTTTTTAA  1139

seq1  TCTAAGTCA  1155
      |||||||||
seq2  TCTAAGTCA  1148


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