BAC Information

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BAC

Clone NameB6Ng01-201J14
ChromosomeX (Build37)
Map Location 123,314,382 - 123,315,548
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201J14.bB6Ng01-201J14.g
ACCGA022329GA022330
length1,1581,015
definitionB6Ng01-201J14.b B6Ng01-201J14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagaaaaaaactactggtaaaaaggaaaatatagaaaacata
tatttccctttagacaaaatgggaaaaaaatctgataaaattccacgtat
ttttaagcagcatttttgaataaaaattaaaaagatatacaaaaatgtgg
ttaaaatttaagaaattaatagaaaaaatgactggtaaatttgaaaacag
cgaaaactcatgttggcgacttgagcaagtagagatcatcattataacat
gcaacttctggtcaaatacaaaaactaggaaactcatggtcactatttga
gaagatagacgtcgtcattttaagataaaatacaagattttatttgaatg
tgtttgtgagaaaattgacaaaatttatagaaaatgttaaaatggaagaa
ttcaatgaaaaaaactactgttagaaaaaaacaaaaccatagaaaactta
tttttcctattagagaaaatgaagagaaacattttctgataaagtggaaa
tgttcttatacagcatttctgatattaatcataataataataaatctcca
tgaaaatgtagttaaaatagaggaaattgatggaaaaaccaactggtaaa
ataaaaatgtagaaaactcatggtcactatttgagaaagtaaaaatcatc
aattttttgataaaataaaagattttcttcaaatgtatttatgacagaat
tgacttaatttatagaaaaatagattaaaatgaaaaaatcattggaaaca
ctacaggtagaaaataaaacataaaacttttttgttctattagaggaaat
ggagaaaaacattttcttataaaattccacatgttcttatacagcattgt
gataaaattgtaaaaaaaaattacaaaattgtggtttaaatttaagaagt
taatggaaaaaaatgactggtaaaattgaaaacagagaaactcatgttca
cgaattagaaagtagagatcattattgtaagatgaaacaaaaagaattta
ttcgaatgtattggtgggaaaattgaaatatgtgtagaaaattatgtgaa
atcagattcgattggaaatacactagtagaacgaaaacttgaaatcctat
ttttttctattagagaaatgggagagaaacatttcctaatacacttggga
atttcata

gaattcacaacagaggaatcttgaagggcaaagaagcagttaaagtaact
gtccaagtccttagtgatcagggaaatgcaaattaaaatgaccctgagat
tccaccttacaccaatcagaatggctaagatcaaaaactcaggtgaaaga
acatgttcatgaggatgtagagaaaaggaaacactcctccatagctggtg
agattgcaagctggtacaaccactgtggaaataaacctggacattcctca
taaaattggaaatagatctatctgaaggaccagctataccactttggggc
tatacccaaaagatgcaacaccatgtcacaggggcacatgttcaactatg
tttataatggccatgtttgtgatagcagaagctgaaaacaactcaaatac
cccacaatagaaggatggatacagaaagtgttgttcatttgcacagtgga
atactattcagctataaagaacatcatgaattttgcaggcaaatagatgg
aactagaaaatatcatcctgagtgaggtaactcagaccccaaaggacatg
aatggtatgtactcactaataaatggatattagccaacatgtatagaata
cccagtacacaggacacagggctcaagaaggttaacaagcagaaagacac
aagttaggatgcctcagtttcacttcagagagagaagaaagcagtccctg
ggggcagagggaaaaatggacctgagtgggagaggggatagcaaggcgaa
gtggagaacatgatcacagaatggtttttggaggaggggggaacaaggct
gaagacctgagagctagcagaaaaatggaaataagcaaccttgaaaggta
agaggtatggggaccctttagtatgtaccacagatctggtagatgagaga
ttctcaggtctcaaagtgggggatccaaagatgaaatgccctattgtgga
gaaagggaatgttgtagggcccattcttcagtagaaagaacaaggtttca
ggtggtgggatgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_123314382_123315548
seq2: B6Ng01-201J14.b_46_1203

seq1  GAATTCAAAAGAAAAAAACTACTGGTAAAAAGGAAAATATAGAAAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAAAAAAACTACTGGTAAAAAGGAAAATATAGAAAACATA  50

seq1  TATTTCCCTTTAGACAAAATGGGAAAAAAATCTGATAAAATTCCACGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCTTTAGACAAAATGGGAAAAAAATCTGATAAAATTCCACGTAT  100

seq1  TTTTAAGCAGCATTTTTGAATAAAAATTAAAAAGATATACAAAAATGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGCAGCATTTTTGAATAAAAATTAAAAAGATATACAAAAATGTGG  150

seq1  TTAAAATTTAAGAAATTAATAGAAAAAATGACTGGTAAATTTGAAAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTAAGAAATTAATAGAAAAAATGACTGGTAAATTTGAAAACAG  200

seq1  CGAAAACTCATGTTGGCGACTTGAGCAAGTAGAGATCATCATTATAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAACTCATGTTGGCGACTTGAGCAAGTAGAGATCATCATTATAACAT  250

seq1  GCAACTTCTGGTCAAATACAAAAACTAGGAAACTCATGGTCACTATTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTCTGGTCAAATACAAAAACTAGGAAACTCATGGTCACTATTTGA  300

seq1  GAAGATAGACGTCGTCATTTTAAGATAAAATACAAGATTTTATTTGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAGACGTCGTCATTTTAAGATAAAATACAAGATTTTATTTGAATG  350

seq1  TGTTTGTGAGAAAATTGACAAAATTTATAGAAAATGTTAAAATGGAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGAGAAAATTGACAAAATTTATAGAAAATGTTAAAATGGAAGAA  400

seq1  TTCAATGAAAAAAACTACTGTTAGAAAAAAACAAAACCATAGAAAACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGAAAAAAACTACTGTTAGAAAAAAACAAAACCATAGAAAACTTA  450

seq1  TTTTTCCTATTAGAGAAAATGAAGAGAAACATTTTCTGATAAAGTGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTATTAGAGAAAATGAAGAGAAACATTTTCTGATAAAGTGGAAA  500

seq1  TGTTCTTATACAGCATTTCTGATATTAATCATAATAATAATAAATCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTATACAGCATTTCTGATATTAATCATAATAATAATAAATCTCCA  550

seq1  TGAAAATGTAGTTAAAATAGAGGAAATTGATGGAAAAACCAACTGGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGTAGTTAAAATAGAGGAAATTGATGGAAAAACCAACTGGTAAA  600

seq1  ATAAAAATGTAGAAAACTCATGGTCACTATTTGAGAAAGTAAAAATCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGTAGAAAACTCATGGTCACTATTTGAGAAAGTAAAAATCATC  650

seq1  AATTTTTTGATAAAATAAAAGATTTTCTTCAAATGTATTTATGACAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTGATAAAATAAAAGATTTTCTTCAAATGTATTTATGACAGAAT  700

seq1  TGACTTAATTTATAGAAAAATAGATTAAAATGAAAAAATCATTGGAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAATTTATAGAAAAATAGATTAAAATGAAAAAATCATTGGAAACA  750

seq1  CTACAGGTAGAAAATAAAACATAAAACTTTTTTGTTCTATTAGAGGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGTAGAAAATAAAACATAAAACTTTTTTGTTCTATTAGAGGAAAT  800

seq1  GGAGAAAAACATTTTCTTATAAAATTCCACATGTTCTTATACAGCATTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAACATTTTCTTATAAAATTCCACATGTTCTTATACAGCATTGT  850

seq1  GATAAAATTGTAAAAAAAAATTACAAAATTGTGGTTAAAATTTAAGAAGT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATAAAATTGTAAAAAAAAATTACAAAATTGTGGTTTAAATTTAAGAAGT  900

seq1  TAATGGAAAAAAATGACTGGTAAAATTGAAAACAGAGAAAACTCATGTTC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAATGGAAAAAAATGACTGGTAAAATTGAAAACAGAG-AAACTCATGTTC  949

seq1  ACGAATTAAGAAAGTAGAGATCATTATTGTAAGATGAAAC-AAAAGAATT  999
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  ACGAATT-AGAAAGTAGAGATCATTATTGTAAGATGAAACAAAAAGAATT  998

seq1  TATTCGAATGTATTGGTGGGAAAATTGAAATAATGTGTAGAAAAATATGT  1049
      ||||||||||||||||||||||||||||||| |||||||||||| |||| 
seq2  TATTCGAATGTATTGGTGGGAAAATTGAAAT-ATGTGTAGAAAATTATG-  1046

seq1  TGAAATTCAAGAATTCGATGGAAAAATACACTAGTAGAAAGGAAAACATA  1099
      ||||| |||   ||||||| |  |||||||||||||| || |||||| | 
seq2  TGAAA-TCA--GATTCGATTG-GAAATACACTAGTAG-AACGAAAAC-TT  1090

seq1  GAAATCATA-TTTTTTCTATTAGAGAAAATGGAGAGAAACATTTTCTAAT  1148
      |||||| || ||||||||||||||||||  |||||||||||||| |||||
seq2  GAAATCCTATTTTTTTCTATTAGAGAAATGGGAGAGAAACATTTCCTAAT  1140

seq1  ACAACTTGAGATTTTCATA  1167
      || ||||| || |||||||
seq2  AC-ACTTGGGAATTTCATA  1158


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