BAC Information

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BAC

Clone NameB6Ng01-202O05
ChromosomeX (Build37)
Map Location 155,074,416 - 155,279,267
singlet/doubletdoublet
Overlap geneLOC436243
Upstream geneLOC667460, LOC667465, Smpx, Klhl34, Cnksr2, EG667483, LOC671033, LOC667487
Downstream geneLOC100040371, Rps6ka3, Eif1ay, Mtap7d2, A830080D01Rik, LOC100041359, Sh3kbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202O05.bB6Ng01-202O05.g
ACCGA023259GA023260
length915603
definitionB6Ng01-202O05.b B6Ng01-202O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,278,666 - 155,279,267)(155,074,416 - 155,075,018)
sequence
gaattcctcaggttttataactggttccagatttctaccctccatttggc
tgattgttcaggtacattgccctacactcagctagcaacataggggctct
gctgacataaattcatctggaagaagatttttaggctttctattactgag
tacttacttaagaaatggttgcaattctggcagttcagcttttgcatatt
gtacatgtgcaaaatgacatatgtttggggtcatgtaatgcagctttctt
tttaagcataaaaatttggaaaccaatattttttgttttctctcctgaag
catgcatttggtgttacagctaagatatctgcttaactcaaggtcagaaa
gaatttcctgatcattttcttttaaaagtttaagaattttatgttttaca
cttagatctatgctctatcttgagatagtttttgcatatgggatatatta
tggattaaaattcattgcttttgcctttggatatataatcattccaggaa
aagaatatatatatatatatatatatatatatatatatatatatatatat
ttgcacatttgtcaaaatcagttgctcatgtggtttatttctggattccc
tattttgttccattggtctatttgcctatcttgaaaccaatatcatgttg
tcttgattactgcattgtaggaagtcttggttttcatcaaaattaaaaac
tcctgttcctttcaacgatactattagagaatgaaaagtcgagatgcaga
tggaaaaatatttgcatatcttttatctgataagggatttttgtatatag
aagttagaacaaagtcagaaataagataaatctgagaaaatgggtaaatc
tttgagcaaaatacttcaccaccacctagtgaggggctgaaaaagtgggt
cagtggtaacaacac

gaattcttaagttccattattcaattacttgctgcaagagtttataaata
aaaatgaattttatatcaaacttgattcaaatatccttgatagtcttagt
ttttgtttgtttattctctaagagttttagtgtgaaatcatttttcattt
catttgctttttctttccaatgtgaatacatttgttttctggtaatgtga
aagacttctaatgcattgttaaatggaaatggtgacaaagacttggtcgt
ttccaaacctaaaagactattttaaatagtttatcattgagtaaaatgct
aaatggagactttgttagctgcctttacttagaatgaaaaaatagtcccc
tcatattcatatttctcagataatttttatgatgaataatgttaaaattt
agtcaaattcttttctttatctattgagataatctggaggggtttctgcc
taattctcatagtagttaattaaatggatttaaaatataaaacctgatag
tcggccatcactggaaagagaggcccattggacttgcaaactttatatgc
cccagtacaggggaacgccagggccaaaaagtgggagtgggtgggtaggg
gag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_155278666_155279267
seq2: B6Ng01-202O05.b_46_647 (reverse)

seq1  TAGGGAATCCAGAAATAAACCACATGAGCAACTGATTTTGACAAATGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATCCAGAAATAAACCACATGAGCAACTGATTTTGACAAATGTGC  50

seq1  AAATATATATATATATATATATATATATATATATATATATATATATATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATATATATATATATATATATATATATATATATATATATATATTC  100

seq1  TTTTCCTGGAATGATTATATATCCAAAGGCAAAAGCAATGAATTTTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGGAATGATTATATATCCAAAGGCAAAAGCAATGAATTTTAATC  150

seq1  CATAATATATCCCATATGCAAAAACTATCTCAAGATAGAGCATAGATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATATATCCCATATGCAAAAACTATCTCAAGATAGAGCATAGATCTA  200

seq1  AGTGTAAAACATAAAATTCTTAAACTTTTAAAAGAAAATGATCAGGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAAACATAAAATTCTTAAACTTTTAAAAGAAAATGATCAGGAAAT  250

seq1  TCTTTCTGACCTTGAGTTAAGCAGATATCTTAGCTGTAACACCAAATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGACCTTGAGTTAAGCAGATATCTTAGCTGTAACACCAAATGCA  300

seq1  TGCTTCAGGAGAGAAAACAAAAAATATTGGTTTCCAAATTTTTATGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGGAGAGAAAACAAAAAATATTGGTTTCCAAATTTTTATGCTTA  350

seq1  AAAAGAAAGCTGCATTACATGACCCCAAACATATGTCATTTTGCACATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGCTGCATTACATGACCCCAAACATATGTCATTTTGCACATGT  400

seq1  ACAATATGCAAAAGCTGAACTGCCAGAATTGCAACCATTTCTTAAGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGCAAAAGCTGAACTGCCAGAATTGCAACCATTTCTTAAGTAAG  450

seq1  TACTCAGTAATAGAAAGCCTAAAAATCTTCTTCCAGATGAATTTATGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTAATAGAAAGCCTAAAAATCTTCTTCCAGATGAATTTATGTCA  500

seq1  GCAGAGCCCCTATGTTGCTAGCTGAGTGTAGGGCAATGTACCTGAACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCCCCTATGTTGCTAGCTGAGTGTAGGGCAATGTACCTGAACAAT  550

seq1  CAGCCAAATGGAGGGTAGAAATCTGGAACCAGTTATAAAACCTGAGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAATGGAGGGTAGAAATCTGGAACCAGTTATAAAACCTGAGGAAT  600

seq1  TC  602
      ||
seq2  TC  602


seq1: chrX_155074416_155075018
seq2: B6Ng01-202O05.g_67_669

seq1  GAATTCTTAAGTTCCATTATTCAATTACTTGCTGCAAGAGTTTATAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGTTCCATTATTCAATTACTTGCTGCAAGAGTTTATAAATA  50

seq1  AAAATGAATTTTATATCAAACTTGATTCAAATATCCTTGATAGTCTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATTTTATATCAAACTTGATTCAAATATCCTTGATAGTCTTAGT  100

seq1  TTTTGTTTGTTTATTCTCTAAGAGTTTTAGTGTGAAATCATTTTTCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTATTCTCTAAGAGTTTTAGTGTGAAATCATTTTTCATTT  150

seq1  CATTTGCTTTTTCTTTCCAATGTGAATACATTTGTTTTCTGGTAATGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTTTTTCTTTCCAATGTGAATACATTTGTTTTCTGGTAATGTGA  200

seq1  AAGACTTCTAATGCATTGTTAAATGGAAATGGTGACAAAGACTTGGTCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTCTAATGCATTGTTAAATGGAAATGGTGACAAAGACTTGGTCGT  250

seq1  TTCCAAACCTAAAAGACTATTTTAAATAGTTTATCATTGAGTAAAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACCTAAAAGACTATTTTAAATAGTTTATCATTGAGTAAAATGCT  300

seq1  AAATGGAGACTTTGTTAGCTGCCTTTACTTAGAATGAAAAAATAGTCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGACTTTGTTAGCTGCCTTTACTTAGAATGAAAAAATAGTCCCC  350

seq1  TCATATTCATATTTCTCAGATAATTTTTATGATGAATAATGTTAAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTCATATTTCTCAGATAATTTTTATGATGAATAATGTTAAAATTT  400

seq1  AGTCAAATTCTTTTCTTTATCTATTGAGATAATCTGGAGGGGTTTCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATTCTTTTCTTTATCTATTGAGATAATCTGGAGGGGTTTCTGCC  450

seq1  TAATTCTCATAGTAGTTAATTAAATGGATTTAAAATATAAAACCTGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTCATAGTAGTTAATTAAATGGATTTAAAATATAAAACCTGATAG  500

seq1  TCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGC  550

seq1  CCCAGTACAGGGGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACAGGGGAACGCCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGG  600

seq1  GAG  603
      |||
seq2  GAG  603


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