BAC Information

Click to search

BAC

Clone NameB6Ng01-203E07
ChromosomeX (Build37)
Map Location 5,770,286 - 5,770,900
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043935, LOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751, Nudt10
Downstream geneBmp15, Shroom4, LOC100043937, Dgkk, Ccnb3, Akap4, Clcn5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203E07.bB6Ng01-203E07.g
ACCGA023529GA023530
length1,169965
definitionB6Ng01-203E07.b B6Ng01-203E07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctactaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcccaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtaccaaggagctaaagggatcttcaacccta
taggtggaacaacattatgactaaccagtacccctgagctctgactctag
ctgcatatgtatcaaaagaggcctagtccgcatcactgcagaagaggcca
ttggacacgcagaactttgtgtggcccgttacagggaacgccaggggcca
aagggtcaattagttgtta
gaattcttaatgatctgtaaaacctaccaatctcttaaaatctttataat
acccatggactggtagggtgccatggggtgcaacagaccacagccagata
ctgcagcctagatagaactttatccagcactgattaaggtgactttaaac
aactttcactggaacctttcttttaaagatttaaagacagctactgaaaa
gatttcctttgtcacctgtgatggtttgtatatgcttcagccagggactg
gcactattaggagttgtgtccttgttggagtaggggtggcctagttggag
taggtatgacactatgggtgtggactataattttagtcctggaagtgagt
atcctgctagcagccttcagatgaagatgtagaactctctgctccttctg
caccatgtctgtctggatggtgccatgttcccaccttgatgataatggac
tgaacctctgaacctgtaagccagccacatttaaatgttgtcctttgtaa
gacttacattggtcatggtgtctgttcacagcaataaaatcctaactaag
tcatcacccattcagccaaagatattaaagatttataatttttttttaat
tttaaaggaaatgtaggtcccagttgctggagttggcttaaaggatgctt
aaggacatagaacaattgagacaagatcttgtgcataaactgaaagctac
cgtctccactgatgataagatttttggtttcttacctgctgtcagaagaa
accaaccctcaggactagcctaagaccaggctcctataattgttaaacta
cctctgtccagattaaagaagacccagagaccctggtaacaaaaggggga
aattgctgtcttccatattgcctggataaagagacagacattcaggagcc
ttggctgtcaccctggaacatactcctcctgcttaagaggaaacatgggg
ctttcattctcgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_5770286_5770900
seq2: B6Ng01-203E07.g_63_678

seq1  GAATTCTTAATGATCTGTAAAACCTACCAATCTCTTAAAATCTTTATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGATCTGTAAAACCTACCAATCTCTTAAAATCTTTATAAT  50

seq1  ACCCCTGGACTGGTAGGGTGCCATGGGGTGCAACAGACCACAGCCAGATA  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGACTGGTAGGGTGCCATGGGGTGCAACAGACCACAGCCAGATA  100

seq1  CTGCAGCCTAGATAGAACTTTATCCAGCACTGATTAAGGTGACTTTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCTAGATAGAACTTTATCCAGCACTGATTAAGGTGACTTTAAAC  150

seq1  AACTTTCACTGGAACCTTTCTTTTAAAGATTTAAAGACAGCTACTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACTTTCACTGGAACCTTTCTTTTAAAGATTTAAAGACAGCTACTGAAAA  200

seq1  GATTTCCTTTGTCACCTGTGATGGTTTGTATATGCTTCAGCCAGGGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTTTGTCACCTGTGATGGTTTGTATATGCTTCAGCCAGGGACTG  250

seq1  GCACTATTAGGAGTTGTGTCCTTGTTGGAGTAGGGGTGGCCTAGTTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATTAGGAGTTGTGTCCTTGTTGGAGTAGGGGTGGCCTAGTTGGAG  300

seq1  TAGGTATGACACTATGGGTGTGGACAATAATTTTAGTCCTGGAAGTGAGT  350
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGGTATGACACTATGGGTGTGGACTATAATTTTAGTCCTGGAAGTGAGT  350

seq1  ATTCTGCTAGCAGCCTTCAGATGAAGATGTAGAACTCTCTGCTCCTTCTG  400
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCTAGCAGCCTTCAGATGAAGATGTAGAACTCTCTGCTCCTTCTG  400

seq1  CACCATGCCTGCCTGGATGGTGCCATGTTCCCACCTTGATGATAATGGAC  450
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  CACCATGTCTGTCTGGATGGTGCCATGTTCCCACCTTGATGATAATGGAC  450

seq1  TGAACCTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTGTCCTTTATAA  500
      |||||||||||||||||||||||||| || |||||||||||||||| |||
seq2  TGAACCTCTGAACCTGTAAGCCAGCCACATTTAAATGTTGTCCTTTGTAA  500

seq1  GACTTACATTGATCATGGTGTCTGTTCACAGCAATAAAATCCTAACTAAG  550
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GACTTACATTGGTCATGGTGTCTGTTCACAGCAATAAAATCCTAACTAAG  550

seq1  TCATCACCCATTCAGCCAAAGATAGTAAAGATTTATAA-TTTTTTTTAAT  599
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  TCATCACCCATTCAGCCAAAGATATTAAAGATTTATAATTTTTTTTTAAT  600

seq1  TTTAAAGGAAATGTAG  615
      ||||||||||||||||
seq2  TTTAAAGGAAATGTAG  616